RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 ALX1Q15699 326 aa25.62■■□□□ 1.69
NEK3-202ENST00000550841 SBK1Q52WX2 424 aa25.62■■□□□ 1.69
NEK3-202ENST00000550841 NAPBQ9H115 298 aa25.62■■□□□ 1.69
NEK3-202ENST00000550841 PRDM10Q9NQV6 1147 aa25.62■■□□□ 1.69
NEK3-202ENST00000550841 USP17L12C9JPN9 530 aa25.61■■□□□ 1.69
NEK3-202ENST00000550841 USP17L21D6R901 530 aa25.61■■□□□ 1.69
NEK3-202ENST00000550841 SGSM2O43147 1006 aa25.61■■□□□ 1.69
NEK3-202ENST00000550841 USP2O75604 605 aaPredicted RBP25.61■■□□□ 1.69
NEK3-202ENST00000550841 MAP3K11Q16584 847 aa25.61■■□□□ 1.69
NEK3-202ENST00000550841 MIGA2Q7L4E1 593 aa25.61■■□□□ 1.69
NEK3-202ENST00000550841 CRACR2BQ8N4Y2 399 aaPredicted RBP25.61■■□□□ 1.69
NEK3-202ENST00000550841 EHD4Q9H223 541 aa25.61■■□□□ 1.69
NEK3-202ENST00000550841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.61■■□□□ 1.69
NEK3-202ENST00000550841 WBP1LQ9NX94 342 aa25.61■■□□□ 1.69
NEK3-202ENST00000550841 ANGEL1Q9UNK9 670 aaKnown RBP25.61■■□□□ 1.69
NEK3-202ENST00000550841 WDR33Q9C0J8 1336 aaKnown RBP25.61■■□□□ 1.69
NEK3-202ENST00000550841 PRKG1Q13976 671 aa25.6■■□□□ 1.69
NEK3-202ENST00000550841 CTR9Q6PD62 1173 aa25.6■■□□□ 1.69
NEK3-202ENST00000550841 KIAA1211Q6ZU35 1233 aa25.6■■□□□ 1.69
NEK3-202ENST00000550841 METTL16Q86W50 562 aaKnown RBP25.6■■□□□ 1.69
NEK3-202ENST00000550841 SERPINB13Q9UIV8 391 aa25.6■■□□□ 1.69
NEK3-202ENST00000550841 C12orf60Q5U649 245 aa25.59■■□□□ 1.69
NEK3-202ENST00000550841 PAXIP1Q6ZW49 1069 aaPredicted RBP25.59■■□□□ 1.69
NEK3-202ENST00000550841 ESYT1Q9BSJ8 1104 aa25.59■■□□□ 1.69
NEK3-202ENST00000550841 DSCC1Q9BVC3 393 aa25.59■■□□□ 1.69
NEK3-202ENST00000550841 PLCD1P51178 756 aa25.58■■□□□ 1.69
NEK3-202ENST00000550841 MAP3K9P80192 1104 aa25.58■■□□□ 1.69
NEK3-202ENST00000550841 MAP2K1Q02750 393 aaPredicted RBP25.58■■□□□ 1.69
NEK3-202ENST00000550841 VPS53Q5VIR6 699 aa25.58■■□□□ 1.69
NEK3-202ENST00000550841 EPB41L4AQ9HCS5 686 aaPredicted RBP25.58■■□□□ 1.69
NEK3-202ENST00000550841 CTNNA3Q9UI47 895 aa25.58■■□□□ 1.69
NEK3-202ENST00000550841 TLL2Q9Y6L7 1015 aa25.58■■□□□ 1.69
NEK3-202ENST00000550841 NAV1Q8NEY1 1877 aa25.57■■□□□ 1.68
NEK3-202ENST00000550841 PAPPA2Q9BXP8 1791 aa25.57■■□□□ 1.68
NEK3-202ENST00000550841 MINDY4BA8MYZ0 360 aa25.57■■□□□ 1.68
NEK3-202ENST00000550841 UBE2Q2LH0YL09 131 aa25.57■■□□□ 1.68
NEK3-202ENST00000550841 SLC3A2P08195 630 aaKnown RBP25.57■■□□□ 1.68
NEK3-202ENST00000550841 ANKRD13AQ8IZ07 590 aa25.57■■□□□ 1.68
NEK3-202ENST00000550841 ZNF112Q9UJU3 913 aa25.57■■□□□ 1.68
NEK3-202ENST00000550841 SSC5DA1L4H1 1573 aa25.56■■□□□ 1.68
NEK3-202ENST00000550841 FGAP02671 866 aa25.56■■□□□ 1.68
NEK3-202ENST00000550841 ECE1P42892 770 aa25.56■■□□□ 1.68
NEK3-202ENST00000550841 HUNKP57058 714 aa25.56■■□□□ 1.68
NEK3-202ENST00000550841 SLC4A8Q2Y0W8 1093 aa25.56■■□□□ 1.68
NEK3-202ENST00000550841 LDLRAD1Q5T700 205 aa25.56■■□□□ 1.68
NEK3-202ENST00000550841 SAPCD2Q86UD0 394 aa25.56■■□□□ 1.68
NEK3-202ENST00000550841 HHIPL1Q96JK4 782 aa25.56■■□□□ 1.68
NEK3-202ENST00000550841 SWAP70Q9UH65 585 aa25.56■■□□□ 1.68
NEK3-202ENST00000550841 ZMYM6O95789 1325 aa25.56■■□□□ 1.68
NEK3-202ENST00000550841 BAZ2AQ9UIF9 1905 aaKnown RBP25.55■■□□□ 1.68
NEK3-202ENST00000550841 LBX1P52954 281 aa25.55■■□□□ 1.68
NEK3-202ENST00000550841 MOB2Q70IA6 237 aa25.55■■□□□ 1.68
NEK3-202ENST00000550841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.55■■□□□ 1.68
NEK3-202ENST00000550841 WRNIP1Q96S55 665 aa25.55■■□□□ 1.68
NEK3-202ENST00000550841 ZNF287Q9HBT7 754 aa25.55■■□□□ 1.68
NEK3-202ENST00000550841 CSADQ9Y600 493 aa25.55■■□□□ 1.68
NEK3-202ENST00000550841 FOXP2O15409 715 aa25.54■■□□□ 1.68
NEK3-202ENST00000550841 EIF5BO60841 1220 aaKnown RBP25.54■■□□□ 1.68
NEK3-202ENST00000550841 CYP2D6P10635 497 aa25.54■■□□□ 1.68
NEK3-202ENST00000550841 GRM1Q13255 1194 aa25.54■■□□□ 1.68
NEK3-202ENST00000550841 CAPNS2Q96L46 248 aa25.54■■□□□ 1.68
NEK3-202ENST00000550841 IL25Q9H293 177 aa25.54■■□□□ 1.68
NEK3-202ENST00000550841 PHF20L1A8MW92 1017 aa25.53■■□□□ 1.68
NEK3-202ENST00000550841 CTNND1O60716 968 aaKnown RBP25.53■■□□□ 1.68
NEK3-202ENST00000550841 GABPAQ06546 454 aa25.53■■□□□ 1.68
NEK3-202ENST00000550841 SLC10A4Q96EP9 437 aa25.53■■□□□ 1.68
NEK3-202ENST00000550841 FZD1Q9UP38 647 aa25.53■■□□□ 1.68
NEK3-202ENST00000550841 PPARAQ07869 468 aa25.52■■□□□ 1.68
NEK3-202ENST00000550841 C16orf86Q6ZW13 317 aa25.52■■□□□ 1.68
NEK3-202ENST00000550841 BEGAINQ9BUH8 593 aa25.52■■□□□ 1.68
NEK3-202ENST00000550841 GINM1Q9NU53 330 aa25.52■■□□□ 1.68
NEK3-202ENST00000550841 U3KPZ7 1027 aaPredicted RBP25.52■■□□□ 1.68
NEK3-202ENST00000550841 CYP2D7A0A087X1C5 515 aa25.51■■□□□ 1.67
NEK3-202ENST00000550841 CYP4F22Q6NT55 531 aa25.51■■□□□ 1.67
NEK3-202ENST00000550841 RGMBQ6NW40 437 aa25.51■■□□□ 1.67
NEK3-202ENST00000550841 TATDN1Q6P1N9 297 aa25.51■■□□□ 1.67
NEK3-202ENST00000550841 ANAPC4Q9UJX5 808 aa25.51■■□□□ 1.67
NEK3-202ENST00000550841 DDX60LQ5H9U9 1706 aaKnown RBP25.51■■□□□ 1.67
NEK3-202ENST00000550841 FAM196BA6NMK8 535 aa25.5■■□□□ 1.67
NEK3-202ENST00000550841 ZNF213O14771 459 aa25.5■■□□□ 1.67
NEK3-202ENST00000550841 CDK8P49336 464 aa25.5■■□□□ 1.67
NEK3-202ENST00000550841 PDE4BQ07343 736 aa25.5■■□□□ 1.67
NEK3-202ENST00000550841 IMMTQ16891 758 aaKnown RBP25.5■■□□□ 1.67
NEK3-202ENST00000550841 CERKLQ49MI3 558 aaPredicted RBP25.5■■□□□ 1.67
NEK3-202ENST00000550841 NOL9Q5SY16 702 aaKnown RBP25.5■■□□□ 1.67
NEK3-202ENST00000550841 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.5■■□□□ 1.67
NEK3-202ENST00000550841 MAP4K1Q92918 833 aa25.5■■□□□ 1.67
NEK3-202ENST00000550841 CCDC102AQ96A19 550 aa25.5■■□□□ 1.67
NEK3-202ENST00000550841 MKNK2Q9HBH9 465 aa25.5■■□□□ 1.67
NEK3-202ENST00000550841 ANO2Q9NQ90 1003 aa25.5■■□□□ 1.67
NEK3-202ENST00000550841 REC8O95072 547 aa25.49■■□□□ 1.67
NEK3-202ENST00000550841 INPP5BP32019 993 aa25.49■■□□□ 1.67
NEK3-202ENST00000550841 CAP2P40123 477 aa25.49■■□□□ 1.67
NEK3-202ENST00000550841 ZNF157P51786 506 aaPredicted RBP25.49■■□□□ 1.67
NEK3-202ENST00000550841 PTH1RQ03431 593 aa25.49■■□□□ 1.67
NEK3-202ENST00000550841 DYNLL2Q96FJ2 89 aa25.49■■□□□ 1.67
NEK3-202ENST00000550841 CCDC17Q96LX7 622 aa25.49■■□□□ 1.67
NEK3-202ENST00000550841 DNAJC18Q9H819 358 aa25.49■■□□□ 1.67
NEK3-202ENST00000550841 PICK1Q9NRD5 415 aa25.49■■□□□ 1.67
NEK3-202ENST00000550841 ROBO3Q96MS0 1386 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms