RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 PDIA3P30101 505 aaKnown RBP16.08■□□□□ 0.16
CALCOCO1-214ENST00000549613 CXCL9Q07325 125 aa16.08■□□□□ 0.16
CALCOCO1-214ENST00000549613 NFXL1Q6ZNB6 911 aa16.08■□□□□ 0.16
CALCOCO1-214ENST00000549613 SGMS1Q86VZ5 419 aa16.08■□□□□ 0.16
CALCOCO1-214ENST00000549613 IQCA1Q86XH1 822 aa16.08■□□□□ 0.16
CALCOCO1-214ENST00000549613 STK11IPQ8N1F8 1099 aa16.08■□□□□ 0.16
CALCOCO1-214ENST00000549613 GMLQ99445 158 aa16.08■□□□□ 0.16
CALCOCO1-214ENST00000549613 MKNK2Q9HBH9 465 aa16.08■□□□□ 0.16
CALCOCO1-214ENST00000549613 NAP1L2Q9ULW6 460 aaPredicted RBP16.08■□□□□ 0.16
CALCOCO1-214ENST00000549613 FLT1P17948 1338 aa16.08■□□□□ 0.16
CALCOCO1-214ENST00000549613 ARFGEF1Q9Y6D6 1849 aa16.08■□□□□ 0.16
CALCOCO1-214ENST00000549613 KLF18A0A0U1RQI7 1052 aa16.07■□□□□ 0.16
CALCOCO1-214ENST00000549613 CCDC69A6NI79 296 aa16.07■□□□□ 0.16
CALCOCO1-214ENST00000549613 EIF6P56537 245 aaKnown RBP16.07■□□□□ 0.16
CALCOCO1-214ENST00000549613 STK3Q13188 491 aa16.07■□□□□ 0.16
CALCOCO1-214ENST00000549613 WTAPQ15007 396 aa16.07■□□□□ 0.16
CALCOCO1-214ENST00000549613 RAB3GAP1Q15042 981 aa16.07■□□□□ 0.16
CALCOCO1-214ENST00000549613 CFAP100Q494V2 611 aa16.07■□□□□ 0.16
CALCOCO1-214ENST00000549613 ZNF444Q8N0Y2 327 aaPredicted RBP16.07■□□□□ 0.16
CALCOCO1-214ENST00000549613 SAP30BPQ9UHR5 308 aaKnown RBP16.07■□□□□ 0.16
CALCOCO1-214ENST00000549613 TAOK2Q9UL54 1235 aa16.07■□□□□ 0.16
CALCOCO1-214ENST00000549613 ROBO3Q96MS0 1386 aa16.07■□□□□ 0.16
CALCOCO1-214ENST00000549613 NAV1Q8NEY1 1877 aa16.06■□□□□ 0.16
CALCOCO1-214ENST00000549613 LAMB1P07942 1786 aa16.06■□□□□ 0.16
CALCOCO1-214ENST00000549613 WDHD1O75717 1129 aaPredicted RBP16.06■□□□□ 0.16
CALCOCO1-214ENST00000549613 HLA-DOAP06340 250 aa16.06■□□□□ 0.16
CALCOCO1-214ENST00000549613 PDCP20941 246 aa16.06■□□□□ 0.16
CALCOCO1-214ENST00000549613 RPS12P25398 132 aaKnown RBP16.06■□□□□ 0.16
CALCOCO1-214ENST00000549613 DLGAP5Q15398 846 aa16.06■□□□□ 0.16
CALCOCO1-214ENST00000549613 ZSCAN10Q96SZ4 725 aaPredicted RBP16.06■□□□□ 0.16
CALCOCO1-214ENST00000549613 IDI2Q9BXS1 227 aa16.06■□□□□ 0.16
CALCOCO1-214ENST00000549613 LY9Q9HBG7 655 aa16.06■□□□□ 0.16
CALCOCO1-214ENST00000549613 TMOD2Q9NZR1 351 aa16.06■□□□□ 0.16
CALCOCO1-214ENST00000549613 KIF3AQ9Y496 699 aa16.06■□□□□ 0.16
CALCOCO1-214ENST00000549613 ZNF646O15015 1829 aaPredicted RBP16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 ENTPD3O75355 529 aa16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 GJB2P29033 226 aa16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 PLCD1P51178 756 aa16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 RCAN1P53805 252 aa16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 HMGN5P82970 282 aaKnown RBP16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 ST3GAL1Q11201 340 aa16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 SCRN1Q12765 414 aa16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 PICALMQ13492 652 aa16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 CPLX2Q6PUV4 134 aaKnown RBP16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 ARHGAP27Q6ZUM4 889 aa16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 OSBPL5Q9H0X9 879 aaPredicted RBP16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 DHX36Q9H2U1 1008 aaKnown RBP16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 GPHNQ9NQX3 736 aaPredicted RBP16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 BRPF3Q9ULD4 1205 aa16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 SLC12A7Q9Y666 1083 aa16.05■□□□□ 0.16
CALCOCO1-214ENST00000549613 CDK5RAP2Q96SN8 1893 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 TSPY2A6NKD2 308 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 GOLGA8BA8MQT2 603 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 ZBTB43O43298 467 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 PRDM1O75626 825 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 SLC34A2O95436 690 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 PPP2R5BQ15173 497 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 C16orf86Q6ZW13 317 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 MTMR14Q8NCE2 650 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 DYNLL2Q96FJ2 89 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 SWAP70Q9UH65 585 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 COL4A5P29400 1685 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 MYH1P12882 1939 aa16.04■□□□□ 0.16
CALCOCO1-214ENST00000549613 FOCADQ5VW36 1801 aa16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 WDR33Q9C0J8 1336 aaKnown RBP16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 SMIM22K7EJ46 135 aa16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 FZD9O00144 591 aa16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 CDK8P49336 464 aa16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 CCT2P78371 535 aaKnown RBP16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 TFAP4Q01664 338 aa16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 RASSF7Q02833 373 aa16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 SEC23AQ15436 765 aa16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 NKX2-3Q8TAU0 364 aa16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 PRMT6Q96LA8 375 aaPredicted RBP16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 ZKSCAN3Q9BRR0 538 aa16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 TCP11L1Q9NUJ3 509 aa16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 ZBTB12Q9Y330 459 aaPredicted RBP16.03■□□□□ 0.16
CALCOCO1-214ENST00000549613 TNKSO95271 1327 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 CCDC196A0A1B0GTZ2 297 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 CPLX1O14810 134 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 MYO1BO43795 1136 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 CDKL5O76039 1030 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 TSPY3P0CV98 308 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 TSPY8P0CW00 308 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 CALM1P0DP23 149 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 CALM2P0DP24 149 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 CALM3P0DP25 149 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 LMNB1P20700 586 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 METAP2P50579 478 aaKnown RBP eCLIP16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 IFIT1BQ5T764 474 aaKnown RBP16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 LARP1BQ659C4 914 aaKnown RBP16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 APOA5Q6Q788 366 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 DGKHQ86XP1 1220 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 FOXP4Q8IVH2 680 aaPredicted RBP16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 FAM184AQ8NB25 1140 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 SMARCC2Q8TAQ2 1214 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 DPF2Q92785 391 aa16.02■□□□□ 0.16
CALCOCO1-214ENST00000549613 GBP4Q96PP9 640 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms