RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 A0A1W2PQ64 194 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 A0A1W2PQD8 194 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 TULP1O00294 542 aaPredicted RBP15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 IL6STP40189 918 aaPredicted RBP15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 CCZ1BP86790 482 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 CCZ1P86791 482 aaPredicted RBP15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 MYL5Q02045 173 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 FOXP4Q8IVH2 680 aaPredicted RBP15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 CELF1Q92879 486 aaKnown RBP15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 EPC1Q9H2F5 836 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 MCM7P33993 719 aa15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 MTERF4Q7Z6M4 381 aaKnown RBP15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 METTL16Q86W50 562 aaKnown RBP15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 SMARCE1Q969G3 411 aa15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 ERCC6LQ2NKX8 1250 aa15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 ATL3Q6DD88 541 aa15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 LRRN4CLQ8ND94 238 aa15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 RASGRP4Q8TDF6 673 aa15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 PKNOX2Q96KN3 472 aa15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 CSRNP2Q9H175 543 aa15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 SAMSN1Q9NSI8 373 aaKnown RBP15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 GNL3LQ9NVN8 582 aaKnown RBP15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 SCN11AQ9UI33 1791 aa15.67■□□□□ 0.1
PRPF40B-209ENST00000548825 TSPY2A6NKD2 308 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 ESR2Q92731 530 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 CPVLQ9H3G5 476 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 VAT1LQ9HCJ6 419 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 ANKIB1Q9P2G1 1089 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 ERCC3P19447 782 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 PRDX5P30044 214 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 CCT6AP40227 531 aaKnown RBP15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 KRBA2Q6ZNG9 492 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 CATIPQ7Z7H3 387 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 IQCA1Q86XH1 822 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 MNS1Q8NEH6 495 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 C8orf37Q96NL8 207 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 CDC5LQ99459 802 aaKnown RBP15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 STX8Q9UNK0 236 aa15.66■□□□□ 0.1
PRPF40B-209ENST00000548825 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 NLRP5P59047 1200 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 PIK3AP1Q6ZUJ8 805 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 CNNM2Q9H8M5 875 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 GSDMDP57764 484 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 POSTNQ15063 836 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 NTRK3Q16288 839 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 EARS2Q5JPH6 523 aaKnown RBP15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 ZNF771Q7L3S4 317 aaPredicted RBP15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 NBPF5PQ86XG9 351 aaPredicted RBP15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 GPKOWQ92917 476 aaPredicted RBP eCLIP15.65■□□□□ 0.13e-7■■■■■ 29.3
PRPF40B-209ENST00000548825 PLA2G12BQ9BX93 195 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 MCM9Q9NXL9 1143 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 ARFGEF2Q9Y6D5 1785 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 E4F1Q66K89 784 aaPredicted RBP15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 ZNF34Q8IZ26 560 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 LZTFL1Q9NQ48 299 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 SAP30BPQ9UHR5 308 aaKnown RBP15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 FBXO3Q9UK99 471 aa15.65■□□□□ 0.1
PRPF40B-209ENST00000548825 VEGFAP15692 232 aaPredicted RBP15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 ARID4AP29374 1257 aaPredicted RBP15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 INTS5Q6P9B9 1019 aaKnown RBP15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 MARCH10Q8NA82 808 aaPredicted RBP15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 PAXBP1Q9Y5B6 917 aa15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 MMP1P03956 469 aa15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 XBP1P17861 261 aa15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 TOB1P50616 345 aaPredicted RBP15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 EIF5P55010 431 aaKnown RBP15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 FMR1Q06787 632 aaKnown RBP eCLIP15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 WASF1Q92558 559 aa15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 PPP1R13BQ96KQ4 1090 aa15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 HOOK1Q9UJC3 728 aaKnown RBP15.64■□□□□ 0.09
PRPF40B-209ENST00000548825 GNG11P61952 73 aa15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 SARM1Q6SZW1 724 aa15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 DZIP1Q86YF9 867 aaKnown RBP15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 RNF41Q9H4P4 317 aaPredicted RBP15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 TRPM3Q9HCF6 1732 aaPredicted RBP15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 CDHR2Q9BYE9 1310 aa15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 CCDC196A0A1B0GTZ2 297 aa15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 TRIM75PA6NK02 468 aa15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 PTPAQ15257 358 aa15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 CRACR2BQ8N4Y2 399 aaPredicted RBP15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 WNT7AO00755 349 aa15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 FMNL1O95466 1100 aaPredicted RBP15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 GOLGA8HP0CJ92 632 aa15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 USP5P45974 858 aa15.63■□□□□ 0.09
PRPF40B-209ENST00000548825 GNPATO15228 680 aa15.62■□□□□ 0.09
PRPF40B-209ENST00000548825 CUTAO60888 179 aa15.62■□□□□ 0.09
PRPF40B-209ENST00000548825 DEXIO95424 95 aa15.62■□□□□ 0.09
PRPF40B-209ENST00000548825 NCAPHQ15003 741 aa15.62■□□□□ 0.09
PRPF40B-209ENST00000548825 ENAHQ8N8S7 591 aaPredicted RBP15.62■□□□□ 0.09
PRPF40B-209ENST00000548825 CTCFLQ8NI51 663 aaPredicted RBP15.62■□□□□ 0.09
PRPF40B-209ENST00000548825 DYNLL2Q96FJ2 89 aa15.62■□□□□ 0.09
PRPF40B-209ENST00000548825 ERICH4A6NGS2 130 aa15.62■□□□□ 0.09
PRPF40B-209ENST00000548825 IFNAR1P17181 557 aa15.62■□□□□ 0.09
PRPF40B-209ENST00000548825 NGLY1Q96IV0 654 aa15.62■□□□□ 0.09
PRPF40B-209ENST00000548825 MAN1B1Q9UKM7 699 aa15.62■□□□□ 0.09
PRPF40B-209ENST00000548825 NEMFO60524 1076 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 BMP6P22004 513 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 EVCP57679 992 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 DIXDC1Q155Q3 683 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms