RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 GRIN3BO60391 1043 aa18.86■□□□□ 0.61
XRCC1-202ENST00000543982 HIRAP54198 1017 aaPredicted RBP18.86■□□□□ 0.61
XRCC1-202ENST00000543982 TPCN1Q9ULQ1 816 aa18.86■□□□□ 0.61
XRCC1-202ENST00000543982 ZKSCAN3Q9BRR0 538 aa18.86■□□□□ 0.61
XRCC1-202ENST00000543982 TOMM22Q9NS69 142 aa18.86■□□□□ 0.61
XRCC1-202ENST00000543982 CNTNAP1P78357 1384 aa18.86■□□□□ 0.61
XRCC1-202ENST00000543982 K7ELQ4 463 aaPredicted RBP18.85■□□□□ 0.61
XRCC1-202ENST00000543982 FAM47AQ5JRC9 791 aa18.85■□□□□ 0.61
XRCC1-202ENST00000543982 TMX3Q96JJ7 454 aa18.85■□□□□ 0.61
XRCC1-202ENST00000543982 DICER1Q9UPY3 1922 aaKnown RBP18.85■□□□□ 0.61
XRCC1-202ENST00000543982 TIAM2Q8IVF5 1701 aa18.85■□□□□ 0.61
XRCC1-202ENST00000543982 GABPAQ06546 454 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 IL27Q8NEV9 243 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 ALDH8A1Q9H2A2 487 aaPredicted RBP18.84■□□□□ 0.61
XRCC1-202ENST00000543982 VEZTQ9HBM0 779 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 FOXD4L1Q9NU39 408 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 DDX60LQ5H9U9 1706 aaKnown RBP18.84■□□□□ 0.61
XRCC1-202ENST00000543982 LAMA4Q16363 1823 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 ROBO3Q96MS0 1386 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 FAM196BA6NMK8 535 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 HMGB1P09429 215 aaKnown RBP18.84■□□□□ 0.61
XRCC1-202ENST00000543982 CDK8P49336 464 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 ST3GAL1Q11201 340 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 KIF4BQ2VIQ3 1234 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 RALYLQ86SE5 291 aaKnown RBP18.84■□□□□ 0.61
XRCC1-202ENST00000543982 IGDCC4Q8TDY8 1250 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 BRF1Q92994 677 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 DNAJC18Q9H819 358 aa18.84■□□□□ 0.61
XRCC1-202ENST00000543982 NMT2O60551 498 aa18.83■□□□□ 0.61
XRCC1-202ENST00000543982 MCM5P33992 734 aa18.83■□□□□ 0.61
XRCC1-202ENST00000543982 TRDNQ13061 729 aa18.83■□□□□ 0.61
XRCC1-202ENST00000543982 ME3Q16798 604 aa18.83■□□□□ 0.61
XRCC1-202ENST00000543982 C16orf86Q6ZW13 317 aa18.83■□□□□ 0.61
XRCC1-202ENST00000543982 AGXT2Q9BYV1 514 aa18.83■□□□□ 0.61
XRCC1-202ENST00000543982 PGAP2Q9UHJ9 254 aa18.83■□□□□ 0.61
XRCC1-202ENST00000543982 ORC4O43929 436 aa18.82■□□□□ 0.6
XRCC1-202ENST00000543982 NPM3O75607 178 aaKnown RBP18.82■□□□□ 0.6
XRCC1-202ENST00000543982 APOBRQ0VD83 1088 aa18.82■□□□□ 0.6
XRCC1-202ENST00000543982 TMEM39BQ9GZU3 492 aa18.82■□□□□ 0.6
XRCC1-202ENST00000543982 RNF41Q9H4P4 317 aaPredicted RBP18.82■□□□□ 0.6
XRCC1-202ENST00000543982 BRPF3Q9ULD4 1205 aa18.82■□□□□ 0.6
XRCC1-202ENST00000543982 H7C1D1 291 aa18.82■□□□□ 0.6
XRCC1-202ENST00000543982 RANBP6O60518 1105 aaKnown RBP18.82■□□□□ 0.6
XRCC1-202ENST00000543982 ENTPD3O75355 529 aa18.82■□□□□ 0.6
XRCC1-202ENST00000543982 RASA1P20936 1047 aa18.82■□□□□ 0.6
XRCC1-202ENST00000543982 SHROOM1Q2M3G4 852 aaPredicted RBP18.82■□□□□ 0.6
XRCC1-202ENST00000543982 KRT23Q9C075 422 aa18.82■□□□□ 0.6
XRCC1-202ENST00000543982 LIMCH1Q9UPQ0 1083 aa18.82■□□□□ 0.6
XRCC1-202ENST00000543982 NAV1Q8NEY1 1877 aa18.82■□□□□ 0.6
XRCC1-202ENST00000543982 NECAB1Q8N987 351 aa18.81■□□□□ 0.6
XRCC1-202ENST00000543982 CNNM2Q9H8M5 875 aa18.81■□□□□ 0.6
XRCC1-202ENST00000543982 SH2B2O14492 632 aaPredicted RBP18.81■□□□□ 0.6
XRCC1-202ENST00000543982 RAB11FIP4Q86YS3 637 aa18.81■□□□□ 0.6
XRCC1-202ENST00000543982 ZSCAN29Q8IWY8 852 aaPredicted RBP18.81■□□□□ 0.6
XRCC1-202ENST00000543982 HACL1Q9UJ83 578 aa18.81■□□□□ 0.6
XRCC1-202ENST00000543982 FOCADQ5VW36 1801 aa18.8■□□□□ 0.6
XRCC1-202ENST00000543982 SHMT1P34896 483 aa18.8■□□□□ 0.6
XRCC1-202ENST00000543982 DLK2Q6UY11 383 aa18.8■□□□□ 0.6
XRCC1-202ENST00000543982 TTC6Q86TZ1 520 aa18.8■□□□□ 0.6
XRCC1-202ENST00000543982 FAM151AQ8WW52 585 aa18.8■□□□□ 0.6
XRCC1-202ENST00000543982 LY9Q9HBG7 655 aa18.8■□□□□ 0.6
XRCC1-202ENST00000543982 IL17RBQ9NRM6 502 aa18.8■□□□□ 0.6
XRCC1-202ENST00000543982 ECM29Q5VYK3 1845 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 POTECB2RU33 542 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 TFAP4Q01664 338 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 PDE4BQ07343 736 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 RRP1BQ14684 758 aaKnown RBP18.79■□□□□ 0.6
XRCC1-202ENST00000543982 ESR2Q92731 530 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.79■□□□□ 0.6
XRCC1-202ENST00000543982 MKNK2Q9HBH9 465 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 SERPINB13Q9UIV8 391 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 SLC3A2P08195 630 aaKnown RBP18.79■□□□□ 0.6
XRCC1-202ENST00000543982 MCM2P49736 904 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 MMP14P50281 582 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 STK3Q13188 491 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 RASA3Q14644 834 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 SEC23AQ15436 765 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 AMOTL1Q8IY63 956 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 FBXL16Q8N461 479 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 TMOD2Q9NZR1 351 aa18.79■□□□□ 0.6
XRCC1-202ENST00000543982 ATRNL1Q5VV63 1379 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 GLTPD2A6NH11 291 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 IFIT3O14879 490 aaKnown RBP18.78■□□□□ 0.6
XRCC1-202ENST00000543982 MYO1BO43795 1136 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 JAG1P78504 1218 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 CUL4AQ13619 759 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 TMEM67Q5HYA8 995 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 ANGEL2Q5VTE6 544 aaKnown RBP18.78■□□□□ 0.6
XRCC1-202ENST00000543982 FKBP1CQ5VVH2 108 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 PRAMEF18Q5VWM3 479 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 TEPSINQ96N21 525 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 SLKQ9H2G2 1235 aaPredicted RBP18.78■□□□□ 0.6
XRCC1-202ENST00000543982 PI4KBQ9UBF8 816 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 WDR19Q8NEZ3 1342 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 LAMB1P07942 1786 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 MYH1P12882 1939 aa18.78■□□□□ 0.6
XRCC1-202ENST00000543982 PCP11498 1178 aaKnown RBP18.77■□□□□ 0.6
XRCC1-202ENST00000543982 FGD1P98174 961 aa18.77■□□□□ 0.6
XRCC1-202ENST00000543982 ENAHQ8N8S7 591 aaPredicted RBP18.77■□□□□ 0.6
XRCC1-202ENST00000543982 CSRNP1Q96S65 589 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms