RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 HYOU1Q9Y4L1 999 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 CTTNBP2Q8WZ74 1663 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 A0A087WUV0 522 aaPredicted RBP16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 GCKP35557 465 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 RPS6KA1Q15418 735 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 KRT71Q3SY84 523 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 CCDC62Q6P9F0 684 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 PPP1R13BQ96KQ4 1090 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 CWF19L2Q2TBE0 894 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 MYSM1Q5VVJ2 828 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 KRT40Q6A162 431 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 RGS22Q8NE09 1264 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 IMPG2Q9BZV3 1241 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 ZSWIM6Q9HCJ5 1215 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 RNF40O75150 1001 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 TRMT2AQ8IZ69 625 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 CDC23Q9UJX2 597 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 SAMM50Q9Y512 469 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 TCP1P17987 556 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 APPBP2Q92624 585 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 ZNF274Q96GC6 653 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 FAM227BQ96M60 508 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 DSCC1Q9BVC3 393 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 NCOA5Q9HCD5 579 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 CEP104O60308 925 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 CMA1P23946 247 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 TTC38Q5R3I4 469 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 GKAP1Q5VSY0 366 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 KBTBD3Q8NAB2 608 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 MSANTD4Q8NCY6 345 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 TNFAIP3P21580 790 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 LIG3P49916 1009 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 IFIH1Q9BYX4 1025 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 A2MP01023 1474 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 PFKFB1P16118 471 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 SNCBQ16143 134 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 G2E3Q7L622 706 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 RABEP2Q9H5N1 569 aa16.67■□□□□ 0.26
SMARCA4-207ENST00000541122 JAK2O60674 1132 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 RXRAP19793 462 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 CFAP157Q5JU67 520 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 NELFBQ8WX92 580 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 PDE11AQ9HCR9 933 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 DDX21Q9NR30 783 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 USH1CQ9Y6N9 552 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 A0A1W2PQ27 194 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 A0A1W2PQ64 194 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 A0A1W2PQD8 194 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 ERCC5P28715 1186 aaPredicted RBP16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 ADKP55263 362 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 PKP1Q13835 747 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 DDX41Q9UJV9 622 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 SPOPO43791 374 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 FLOT1O75955 427 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 DENND2CQ68D51 928 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 MICAL1Q8TDZ2 1067 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 SPATA31E1Q6ZUB1 1445 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 HIP1RO75146 1068 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 AP1ARQ63HQ0 302 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 TTC6Q86TZ1 520 aa16.66■□□□□ 0.26
SMARCA4-207ENST00000541122 CCDC151A5D8V7 595 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 SH2D4BQ5SQS7 431 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 NBPF14Q5TI25 921 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 ARHGEF2Q92974 986 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 TXNDC16Q9P2K2 825 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 NUP153P49790 1475 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 CETN3O15182 167 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 CUL4AQ13619 759 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 LRCH2Q5VUJ6 765 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 ZNF365Q70YC5 407 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 KLHL7Q8IXQ5 586 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 HOMER3Q9NSC5 361 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 SYCP2Q9BX26 1530 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 INF2Q27J81 1249 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 MAGEB6Q8N7X4 407 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 KIFAP3Q92845 792 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 SPTLC3Q9NUV7 552 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 PLCH2O75038 1416 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 NUTM2BA6NNL0 878 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 NUTM2EB1AL46 878 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 LONRF2Q1L5Z9 754 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 RPGRQ92834 1020 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 FRMD4BQ9Y2L6 1034 aa16.65■□□□□ 0.26
SMARCA4-207ENST00000541122 ADGRL2O95490 1459 aa16.64■□□□□ 0.26
SMARCA4-207ENST00000541122 PFKFB2O60825 505 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 CTNNA1P35221 906 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 PPANQ9NQ55 473 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 FAM184BQ9ULE4 1060 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 RIPOR2Q9Y4F9 1068 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 GJC1P36383 396 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 TNNI2P48788 182 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 CCDC14Q49A88 953 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 DCAF17Q5H9S7 520 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 MAIP1Q8WWC4 291 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 VEZTQ9HBM0 779 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 STK24Q9Y6E0 443 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 COMMD10Q9Y6G5 202 aa16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 CASQ2O14958 399 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-207ENST00000541122 IL13P35225 146 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms