RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 HPSEQ9Y251 543 aa20.73■□□□□ 0.91
GNE-204ENST00000539208 RTCBQ9Y3I0 505 aaKnown RBP20.73■□□□□ 0.91
GNE-204ENST00000539208 BECN2A8MW95 431 aa20.72■□□□□ 0.91
GNE-204ENST00000539208 NOSTRINQ8IVI9 506 aa20.72■□□□□ 0.91
GNE-204ENST00000539208 DUOX1Q9NRD9 1551 aa20.72■□□□□ 0.91
GNE-204ENST00000539208 HIBADHP31937 336 aaKnown RBP20.72■□□□□ 0.91
GNE-204ENST00000539208 SAFBQ15424 915 aaKnown RBP eCLIP20.72■□□□□ 0.91
GNE-204ENST00000539208 SMIM5Q71RC9 77 aa20.72■□□□□ 0.91
GNE-204ENST00000539208 NSUN4Q96CB9 384 aaKnown RBP20.72■□□□□ 0.91
GNE-204ENST00000539208 FOXP1Q9H334 677 aaPredicted RBP20.72■□□□□ 0.91
GNE-204ENST00000539208 CCNL1Q9UK58 526 aaPredicted RBP20.72■□□□□ 0.91
GNE-204ENST00000539208 SLC3A2P08195 630 aaKnown RBP20.71■□□□□ 0.91
GNE-204ENST00000539208 PTGS1P23219 599 aa20.71■□□□□ 0.91
GNE-204ENST00000539208 TM4SF1P30408 202 aa20.71■□□□□ 0.91
GNE-204ENST00000539208 DYNLL1P63167 89 aaKnown RBP20.71■□□□□ 0.91
GNE-204ENST00000539208 DRC7Q8IY82 874 aa20.71■□□□□ 0.91
GNE-204ENST00000539208 TNKSO95271 1327 aa20.71■□□□□ 0.91
GNE-204ENST00000539208 CUTAO60888 179 aa20.7■□□□□ 0.91
GNE-204ENST00000539208 IGSF3O75054 1194 aa20.7■□□□□ 0.91
GNE-204ENST00000539208 MARCKSP29966 332 aaPredicted RBP20.7■□□□□ 0.91
GNE-204ENST00000539208 GUCY1A2P33402 732 aa20.7■□□□□ 0.91
GNE-204ENST00000539208 CCDC186Q7Z3E2 898 aa20.7■□□□□ 0.91
GNE-204ENST00000539208 MROH7-TTC4A0A0A0MT08 1334 aa20.7■□□□□ 0.9
GNE-204ENST00000539208 RESP18Q5W5W9 173 aa20.7■□□□□ 0.9
GNE-204ENST00000539208 ARHGEF1Q92888 912 aaKnown RBP20.7■□□□□ 0.9
GNE-204ENST00000539208 ZSCAN10Q96SZ4 725 aaPredicted RBP20.7■□□□□ 0.9
GNE-204ENST00000539208 CLIP2Q9UDT6 1046 aa20.7■□□□□ 0.9
GNE-204ENST00000539208 PYCARDQ9ULZ3 195 aa20.7■□□□□ 0.9
GNE-204ENST00000539208 LY75O60449 1722 aa20.69■□□□□ 0.9
GNE-204ENST00000539208 UBE2Q2LH0YL09 131 aa20.69■□□□□ 0.9
GNE-204ENST00000539208 ZRSR1Q15695 479 aaKnown RBP20.69■□□□□ 0.9
GNE-204ENST00000539208 SHC4Q6S5L8 630 aa20.69■□□□□ 0.9
GNE-204ENST00000539208 RNF26Q9BY78 433 aaPredicted RBP20.69■□□□□ 0.9
GNE-204ENST00000539208 USP21Q9UK80 565 aa20.69■□□□□ 0.9
GNE-204ENST00000539208 MYH13Q9UKX3 1938 aa20.69■□□□□ 0.9
GNE-204ENST00000539208 UBAP1LF5GYI3 381 aa20.69■□□□□ 0.9
GNE-204ENST00000539208 KLRK1P26718 216 aa20.69■□□□□ 0.9
GNE-204ENST00000539208 SYKP43405 635 aa20.69■□□□□ 0.9
GNE-204ENST00000539208 NLRP12P59046 1061 aa20.69■□□□□ 0.9
GNE-204ENST00000539208 MECOMQ03112 1051 aa20.69■□□□□ 0.9
GNE-204ENST00000539208 CTR9Q6PD62 1173 aa20.69■□□□□ 0.9
GNE-204ENST00000539208 TAF1LQ8IZX4 1826 aa20.69■□□□□ 0.9
GNE-204ENST00000539208 BTBD18B2RXH4 712 aa20.68■□□□□ 0.9
GNE-204ENST00000539208 DIS3L2Q8IYB7 885 aaKnown RBP20.68■□□□□ 0.9
GNE-204ENST00000539208 STK11IPQ8N1F8 1099 aa20.68■□□□□ 0.9
GNE-204ENST00000539208 ENAHQ8N8S7 591 aaPredicted RBP20.68■□□□□ 0.9
GNE-204ENST00000539208 ERCC4Q92889 916 aaPredicted RBP20.68■□□□□ 0.9
GNE-204ENST00000539208 SPATA31A6Q5VVP1 1343 aa20.68■□□□□ 0.9
GNE-204ENST00000539208 IRS2Q9Y4H2 1338 aa20.68■□□□□ 0.9
GNE-204ENST00000539208 MAST2Q6P0Q8 1798 aa20.68■□□□□ 0.9
GNE-204ENST00000539208 RILPL1Q5EBL4 403 aa20.68■□□□□ 0.9
GNE-204ENST00000539208 ATP8A2Q9NTI2 1148 aa20.68■□□□□ 0.9
GNE-204ENST00000539208 NRBP1Q9UHY1 535 aa20.68■□□□□ 0.9
GNE-204ENST00000539208 DLEC1Q9Y238 1755 aa20.67■□□□□ 0.9
GNE-204ENST00000539208 IQCA1Q86XH1 822 aa20.67■□□□□ 0.9
GNE-204ENST00000539208 ELOA2Q8IYF1 753 aaPredicted RBP20.67■□□□□ 0.9
GNE-204ENST00000539208 C17orf53Q8N3J3 647 aaPredicted RBP20.67■□□□□ 0.9
GNE-204ENST00000539208 AOPEPQ8N6M6 819 aa20.67■□□□□ 0.9
GNE-204ENST00000539208 NUP133Q8WUM0 1156 aa20.67■□□□□ 0.9
GNE-204ENST00000539208 CRNKL1Q9BZJ0 848 aaKnown RBP20.67■□□□□ 0.9
GNE-204ENST00000539208 TUBE1Q9UJT0 475 aa20.67■□□□□ 0.9
GNE-204ENST00000539208 ORC4O43929 436 aa20.66■□□□□ 0.9
GNE-204ENST00000539208 CALM1P0DP23 149 aa20.66■□□□□ 0.9
GNE-204ENST00000539208 CALM2P0DP24 149 aa20.66■□□□□ 0.9
GNE-204ENST00000539208 CALM3P0DP25 149 aa20.66■□□□□ 0.9
GNE-204ENST00000539208 DNTTIP2Q5QJE6 756 aaKnown RBP20.66■□□□□ 0.9
GNE-204ENST00000539208 PRIMPOLQ96LW4 560 aa20.66■□□□□ 0.9
GNE-204ENST00000539208 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.66■□□□□ 0.9
GNE-204ENST00000539208 BAZ2AQ9UIF9 1905 aaKnown RBP20.66■□□□□ 0.9
GNE-204ENST00000539208 A0A087WWV3 80 aa20.66■□□□□ 0.9
GNE-204ENST00000539208 TOB1P50616 345 aaPredicted RBP20.66■□□□□ 0.9
GNE-204ENST00000539208 DPCR1Q3MIW9 517 aa20.66■□□□□ 0.9
GNE-204ENST00000539208 CATIPQ7Z7H3 387 aa20.66■□□□□ 0.9
GNE-204ENST00000539208 KRI1Q8N9T8 703 aaKnown RBP20.66■□□□□ 0.9
GNE-204ENST00000539208 RBM28Q9NW13 759 aaKnown RBP20.66■□□□□ 0.9
GNE-204ENST00000539208 TFCP2L1Q9NZI6 479 aa20.66■□□□□ 0.9
GNE-204ENST00000539208 KCNJ14Q9UNX9 436 aa20.66■□□□□ 0.9
GNE-204ENST00000539208 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.65■□□□□ 0.9
GNE-204ENST00000539208 USP17L12C9JPN9 530 aa20.65■□□□□ 0.9
GNE-204ENST00000539208 USP17L21D6R901 530 aa20.65■□□□□ 0.9
GNE-204ENST00000539208 SMIM22K7EJ46 135 aa20.65■□□□□ 0.9
GNE-204ENST00000539208 FUT2Q10981 343 aa20.65■□□□□ 0.9
GNE-204ENST00000539208 SBK1Q52WX2 424 aa20.65■□□□□ 0.9
GNE-204ENST00000539208 IFIT1BQ5T764 474 aaKnown RBP20.65■□□□□ 0.9
GNE-204ENST00000539208 SPTY2D1Q68D10 685 aaPredicted RBP20.65■□□□□ 0.9
GNE-204ENST00000539208 AMIGO3Q86WK7 504 aa20.65■□□□□ 0.9
GNE-204ENST00000539208 MORC2Q9Y6X9 1032 aaPredicted RBP20.65■□□□□ 0.9
GNE-204ENST00000539208 CYP2D7A0A087X1C5 515 aa20.65■□□□□ 0.9
GNE-204ENST00000539208 PRPF3O43395 683 aaKnown RBP20.65■□□□□ 0.9
GNE-204ENST00000539208 NEMFO60524 1076 aa20.65■□□□□ 0.9
GNE-204ENST00000539208 DCP1AQ9NPI6 582 aaPredicted RBP20.65■□□□□ 0.9
GNE-204ENST00000539208 KIAA1551Q9HCM1 1747 aa20.65■□□□□ 0.9
GNE-204ENST00000539208 MYH2Q9UKX2 1941 aa20.64■□□□□ 0.9
GNE-204ENST00000539208 DDAH1O94760 285 aa20.64■□□□□ 0.89
GNE-204ENST00000539208 XBP1P17861 261 aa20.64■□□□□ 0.89
GNE-204ENST00000539208 NT5C2P49902 561 aa20.64■□□□□ 0.89
GNE-204ENST00000539208 TRAPPC3LQ5T215 181 aa20.64■□□□□ 0.89
GNE-204ENST00000539208 LAMB1P07942 1786 aa20.64■□□□□ 0.89
GNE-204ENST00000539208 CCDC88AQ3V6T2 1871 aa20.64■□□□□ 0.89
GNE-204ENST00000539208 UQCRHLA0A096LP55 91 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms