RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 CCDC183Q5T5S1 534 aa17.08■□□□□ 0.32
NR1H3-231ENST00000529540 IDI2Q9BXS1 227 aa17.08■□□□□ 0.32
NR1H3-231ENST00000529540 DCP1AQ9NPI6 582 aaPredicted RBP17.08■□□□□ 0.32
NR1H3-231ENST00000529540 NT5C2P49902 561 aa17.07■□□□□ 0.32
NR1H3-231ENST00000529540 TNFAIP1Q13829 316 aa17.07■□□□□ 0.32
NR1H3-231ENST00000529540 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
NR1H3-231ENST00000529540 USP48Q86UV5 1035 aa17.07■□□□□ 0.32
NR1H3-231ENST00000529540 SDR42E1Q8WUS8 393 aa17.07■□□□□ 0.32
NR1H3-231ENST00000529540 ZBED3Q96IU2 234 aaPredicted RBP17.07■□□□□ 0.32
NR1H3-231ENST00000529540 ADARB2Q9NS39 739 aaKnown RBP17.07■□□□□ 0.32
NR1H3-231ENST00000529540 WNT10BO00744 389 aa17.07■□□□□ 0.32
NR1H3-231ENST00000529540 ZNF213O14771 459 aa17.07■□□□□ 0.32
NR1H3-231ENST00000529540 SLC3A2P08195 630 aaKnown RBP17.07■□□□□ 0.32
NR1H3-231ENST00000529540 PCP11498 1178 aaKnown RBP17.07■□□□□ 0.32
NR1H3-231ENST00000529540 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
NR1H3-231ENST00000529540 SBK1Q52WX2 424 aa17.07■□□□□ 0.32
NR1H3-231ENST00000529540 RNF214Q8ND24 703 aa17.07■□□□□ 0.32
NR1H3-231ENST00000529540 TGFBRAP1Q8WUH2 860 aa17.07■□□□□ 0.32
NR1H3-231ENST00000529540 PRMT6Q96LA8 375 aaPredicted RBP17.07■□□□□ 0.32
NR1H3-231ENST00000529540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.07■□□□□ 0.32
NR1H3-231ENST00000529540 FLT1P17948 1338 aa17.06■□□□□ 0.32
NR1H3-231ENST00000529540 FOXP2O15409 715 aa17.06■□□□□ 0.32
NR1H3-231ENST00000529540 PRKAB2O43741 272 aa17.06■□□□□ 0.32
NR1H3-231ENST00000529540 ENTPD3O75355 529 aa17.06■□□□□ 0.32
NR1H3-231ENST00000529540 TNNI2P48788 182 aa17.06■□□□□ 0.32
NR1H3-231ENST00000529540 TSGA10IPQ3SY00 556 aa17.06■□□□□ 0.32
NR1H3-231ENST00000529540 TTC14Q96N46 770 aa17.06■□□□□ 0.32
NR1H3-231ENST00000529540 DHX36Q9H2U1 1008 aaKnown RBP17.06■□□□□ 0.32
NR1H3-231ENST00000529540 HACL1Q9UJ83 578 aa17.06■□□□□ 0.32
NR1H3-231ENST00000529540 COL2A1P02458 1487 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-231ENST00000529540 GADD45BO75293 160 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-231ENST00000529540 WDHD1O75717 1129 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-231ENST00000529540 PTMAP06454 111 aaKnown RBP17.05■□□□□ 0.32
NR1H3-231ENST00000529540 CREB3L3Q68CJ9 461 aa17.05■□□□□ 0.32
NR1H3-231ENST00000529540 KCNB2Q92953 911 aa17.05■□□□□ 0.32
NR1H3-231ENST00000529540 TDRD3Q9H7E2 651 aaKnown RBP17.05■□□□□ 0.32
NR1H3-231ENST00000529540 EPB41L4AQ9HCS5 686 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-231ENST00000529540 MCM9Q9NXL9 1143 aa17.05■□□□□ 0.32
NR1H3-231ENST00000529540 MKRN1Q9UHC7 482 aaKnown RBP17.05■□□□□ 0.32
NR1H3-231ENST00000529540 SLC27A2O14975 620 aa17.04■□□□□ 0.32
NR1H3-231ENST00000529540 RBM10P98175 930 aaKnown RBP17.04■□□□□ 0.32
NR1H3-231ENST00000529540 TTC6Q86TZ1 520 aa17.04■□□□□ 0.32
NR1H3-231ENST00000529540 FAM83AQ86UY5 434 aa17.04■□□□□ 0.32
NR1H3-231ENST00000529540 RNF41Q9H4P4 317 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-231ENST00000529540 ZNF287Q9HBT7 754 aa17.04■□□□□ 0.32
NR1H3-231ENST00000529540 ZNF70Q9UC06 446 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-231ENST00000529540 FOCADQ5VW36 1801 aa17.04■□□□□ 0.32
NR1H3-231ENST00000529540 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
NR1H3-231ENST00000529540 ADAMTSL1Q8N6G6 1762 aa17.04■□□□□ 0.32
NR1H3-231ENST00000529540 HLA-DOAP06340 250 aa17.04■□□□□ 0.32
NR1H3-231ENST00000529540 ZSCAN22P10073 491 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-231ENST00000529540 PSMA5P28066 241 aa17.04■□□□□ 0.32
NR1H3-231ENST00000529540 USP50Q70EL3 339 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-231ENST00000529540 APOBEC3FQ8IUX4 373 aaKnown RBP17.04■□□□□ 0.32
NR1H3-231ENST00000529540 MAPKAPK5Q8IW41 473 aa17.04■□□□□ 0.32
NR1H3-231ENST00000529540 UPF3BQ9BZI7 483 aaKnown RBP17.04■□□□□ 0.32
NR1H3-231ENST00000529540 OSBPL5Q9H0X9 879 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-231ENST00000529540 ANAPC4Q9UJX5 808 aa17.04■□□□□ 0.32
NR1H3-231ENST00000529540 SCN4AP35499 1836 aa17.03■□□□□ 0.32
NR1H3-231ENST00000529540 WDR90Q96KV7 1748 aa17.03■□□□□ 0.32
NR1H3-231ENST00000529540 NAV1Q8NEY1 1877 aa17.03■□□□□ 0.32
NR1H3-231ENST00000529540 POLR3DP05423 398 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-231ENST00000529540 CYP21A2P08686 494 aa17.03■□□□□ 0.32
NR1H3-231ENST00000529540 HMGB1P09429 215 aaKnown RBP17.03■□□□□ 0.32
NR1H3-231ENST00000529540 UBE2HP62256 183 aa17.03■□□□□ 0.32
NR1H3-231ENST00000529540 PICALMQ13492 652 aa17.03■□□□□ 0.32
NR1H3-231ENST00000529540 TBC1D10BQ4KMP7 808 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-231ENST00000529540 SAMD7Q7Z3H4 446 aa17.03■□□□□ 0.32
NR1H3-231ENST00000529540 PNMA8AQ86V59 439 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-231ENST00000529540 PIBF1Q8WXW3 757 aa17.03■□□□□ 0.32
NR1H3-231ENST00000529540 FAM13BQ9NYF5 915 aa17.03■□□□□ 0.32
NR1H3-231ENST00000529540 PITPNM2Q9BZ72 1349 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 USP17L12C9JPN9 530 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 USP17L21D6R901 530 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 EPS15P42566 896 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 PPARAQ07869 468 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 TRDNQ13061 729 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 NBPF9Q3BBW0 867 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 RBM26Q5T8P6 1007 aaKnown RBP17.02■□□□□ 0.32
NR1H3-231ENST00000529540 CTR9Q6PD62 1173 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 NOL8Q76FK4 1167 aaKnown RBP17.02■□□□□ 0.32
NR1H3-231ENST00000529540 MYRIPQ8NFW9 859 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 ZC3H15Q8WU90 426 aaKnown RBP17.02■□□□□ 0.32
NR1H3-231ENST00000529540 PRIMPOLQ96LW4 560 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 CNNM2Q9H8M5 875 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.02■□□□□ 0.32
NR1H3-231ENST00000529540 SNX14Q9Y5W7 946 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 UTRNP46939 3433 aa17.02■□□□□ 0.32
NR1H3-231ENST00000529540 ATRNL1Q5VV63 1379 aa17.02■□□□□ 0.31
NR1H3-231ENST00000529540 PDE4BQ07343 736 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 C12orf60Q5U649 245 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 FAM151AQ8WW52 585 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 TM6SF1Q9BZW5 370 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 VEZTQ9HBM0 779 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 PCDHAC2Q9Y5I4 1007 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 ATP6V1DQ9Y5K8 247 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 PPP2R3BQ9Y5P8 575 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 LAMA4Q16363 1823 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 ROBO3Q96MS0 1386 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 SHTN1A0MZ66 631 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms