RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 USP5P45974 858 aa19.66■□□□□ 0.74
SREK1-212ENST00000522912 CPLX2Q6PUV4 134 aaKnown RBP19.66■□□□□ 0.74
SREK1-212ENST00000522912 DPP8Q6V1X1 898 aaPredicted RBP19.66■□□□□ 0.74
SREK1-212ENST00000522912 ENAHQ8N8S7 591 aaPredicted RBP19.66■□□□□ 0.74
SREK1-212ENST00000522912 TBC1D22AQ8WUA7 517 aa19.66■□□□□ 0.74
SREK1-212ENST00000522912 AIFM3Q96NN9 605 aa19.66■□□□□ 0.74
SREK1-212ENST00000522912 ZSCAN10Q96SZ4 725 aaPredicted RBP19.66■□□□□ 0.74
SREK1-212ENST00000522912 PANK2Q9BZ23 570 aa19.66■□□□□ 0.74
SREK1-212ENST00000522912 SLX4Q8IY92 1834 aa19.66■□□□□ 0.74
SREK1-212ENST00000522912 GTF2IP78347 998 aa19.66■□□□□ 0.74
SREK1-212ENST00000522912 LRSAM1Q6UWE0 723 aa19.66■□□□□ 0.74
SREK1-212ENST00000522912 ZNF654Q8IZM8 581 aa19.66■□□□□ 0.74
SREK1-212ENST00000522912 ZC3H12CQ9C0D7 883 aaKnown RBP19.66■□□□□ 0.74
SREK1-212ENST00000522912 GPR75-ASB3A0A0A6YYF3 556 aa19.65■□□□□ 0.74
SREK1-212ENST00000522912 BTDP43251 543 aa19.65■□□□□ 0.74
SREK1-212ENST00000522912 SLC4A8Q2Y0W8 1093 aa19.65■□□□□ 0.74
SREK1-212ENST00000522912 C12orf60Q5U649 245 aa19.65■□□□□ 0.74
SREK1-212ENST00000522912 NOL10Q9BSC4 688 aaKnown RBP19.65■□□□□ 0.74
SREK1-212ENST00000522912 IARSP41252 1262 aaKnown RBP19.64■□□□□ 0.74
SREK1-212ENST00000522912 RTN1Q16799 776 aa19.64■□□□□ 0.74
SREK1-212ENST00000522912 TGFBRAP1Q8WUH2 860 aa19.64■□□□□ 0.74
SREK1-212ENST00000522912 ALG1Q9BT22 464 aa19.64■□□□□ 0.74
SREK1-212ENST00000522912 H0YIN7 160 aa19.64■□□□□ 0.73
SREK1-212ENST00000522912 SLC3A2P08195 630 aaKnown RBP19.64■□□□□ 0.73
SREK1-212ENST00000522912 RCAN1P53805 252 aa19.64■□□□□ 0.73
SREK1-212ENST00000522912 DOK7Q18PE1 504 aa19.64■□□□□ 0.73
SREK1-212ENST00000522912 CCDC183Q5T5S1 534 aa19.64■□□□□ 0.73
SREK1-212ENST00000522912 STYK1Q6J9G0 422 aa19.64■□□□□ 0.73
SREK1-212ENST00000522912 FAM163AQ96GL9 167 aaPredicted RBP19.64■□□□□ 0.73
SREK1-212ENST00000522912 FTOQ9C0B1 505 aaKnown RBP eCLIP19.64■□□□□ 0.73
SREK1-212ENST00000522912 CFAP45Q9UL16 551 aa19.64■□□□□ 0.73
SREK1-212ENST00000522912 UBE2Q2LH0YL09 131 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 IFNAR1P17181 557 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 FAM47AQ5JRC9 791 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 IQCA1Q86XH1 822 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 RGS22Q8NE09 1264 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 PGBD1Q96JS3 809 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 GAKO14976 1311 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 FMNL1O95466 1100 aaPredicted RBP19.63■□□□□ 0.73
SREK1-212ENST00000522912 CHRNA5P30532 468 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 CEBPZQ03701 1054 aaKnown RBP19.63■□□□□ 0.73
SREK1-212ENST00000522912 SSRP1Q08945 709 aaKnown RBP19.63■□□□□ 0.73
SREK1-212ENST00000522912 FANCBQ8NB91 859 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 FBXO41Q8TF61 875 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 NUP133Q8WUM0 1156 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 USP28Q96RU2 1077 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 SLC26A6Q9BXS9 759 aa19.63■□□□□ 0.73
SREK1-212ENST00000522912 PDGFDQ9GZP0 370 aaPredicted RBP19.63■□□□□ 0.73
SREK1-212ENST00000522912 STK36Q9NRP7 1315 aa19.62■□□□□ 0.73
SREK1-212ENST00000522912 KIF28PB7ZC32 967 aa19.62■□□□□ 0.73
SREK1-212ENST00000522912 RHBDL3P58872 404 aa19.62■□□□□ 0.73
SREK1-212ENST00000522912 PDE4BQ07343 736 aa19.62■□□□□ 0.73
SREK1-212ENST00000522912 IFIT1BQ5T764 474 aaKnown RBP19.62■□□□□ 0.73
SREK1-212ENST00000522912 MAPKAPK5Q8IW41 473 aa19.62■□□□□ 0.73
SREK1-212ENST00000522912 CERS5Q8N5B7 392 aa19.62■□□□□ 0.73
SREK1-212ENST00000522912 TMX4Q9H1E5 349 aaPredicted RBP19.62■□□□□ 0.73
SREK1-212ENST00000522912 RCOR1Q9UKL0 485 aa19.62■□□□□ 0.73
SREK1-212ENST00000522912 DDX60LQ5H9U9 1706 aaKnown RBP19.62■□□□□ 0.73
SREK1-212ENST00000522912 NMT2O60551 498 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 ATL3Q6DD88 541 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 NBPF11Q86T75 865 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 CERS3Q8IU89 383 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 DYNLL2Q96FJ2 89 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 ZNF396Q96N95 335 aaPredicted RBP19.61■□□□□ 0.73
SREK1-212ENST00000522912 RBSNQ9H1K0 784 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 MYH6P13533 1939 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 ROBO3Q96MS0 1386 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 LIG1P18858 919 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 KIF23Q02241 960 aaPredicted RBP19.61■□□□□ 0.73
SREK1-212ENST00000522912 KRT40Q6A162 431 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 DEFB132Q7Z7B7 95 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 SLF2Q8IX21 1173 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 TEX11Q8IYF3 940 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 CMTR1Q8N1G2 835 aaKnown RBP19.61■□□□□ 0.73
SREK1-212ENST00000522912 FBXW7Q969H0 707 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 FOCADQ5VW36 1801 aa19.61■□□□□ 0.73
SREK1-212ENST00000522912 MYH1P12882 1939 aa19.6■□□□□ 0.73
SREK1-212ENST00000522912 POLR3DP05423 398 aaPredicted RBP19.6■□□□□ 0.73
SREK1-212ENST00000522912 PLCD1P51178 756 aa19.6■□□□□ 0.73
SREK1-212ENST00000522912 CRACR2BQ8N4Y2 399 aaPredicted RBP19.6■□□□□ 0.73
SREK1-212ENST00000522912 MXD3Q9BW11 206 aa19.6■□□□□ 0.73
SREK1-212ENST00000522912 SAP30BPQ9UHR5 308 aaKnown RBP19.6■□□□□ 0.73
SREK1-212ENST00000522912 DAGLAQ9Y4D2 1042 aa19.6■□□□□ 0.73
SREK1-212ENST00000522912 CCDC196A0A1B0GTZ2 297 aa19.59■□□□□ 0.73
SREK1-212ENST00000522912 PLCG2P16885 1265 aa19.59■□□□□ 0.73
SREK1-212ENST00000522912 GUCY1A2P33402 732 aa19.59■□□□□ 0.73
SREK1-212ENST00000522912 EYA3Q99504 573 aa19.59■□□□□ 0.73
SREK1-212ENST00000522912 SUGT1Q9Y2Z0 365 aa19.59■□□□□ 0.73
SREK1-212ENST00000522912 GOLGA6L4A6NEF3 574 aa19.59■□□□□ 0.73
SREK1-212ENST00000522912 TROAPQ12815 778 aa19.59■□□□□ 0.73
SREK1-212ENST00000522912 BRAPQ7Z569 592 aa19.59■□□□□ 0.73
SREK1-212ENST00000522912 CATIPQ7Z7H3 387 aa19.59■□□□□ 0.73
SREK1-212ENST00000522912 CCDC82Q8N4S0 544 aa19.59■□□□□ 0.73
SREK1-212ENST00000522912 ZNF219Q9P2Y4 722 aaPredicted RBP19.59■□□□□ 0.73
SREK1-212ENST00000522912 TSPY2A6NKD2 308 aa19.58■□□□□ 0.73
SREK1-212ENST00000522912 BAG6P46379 1132 aa19.58■□□□□ 0.73
SREK1-212ENST00000522912 TAOK2Q9UL54 1235 aa19.58■□□□□ 0.73
SREK1-212ENST00000522912 FLT1P17948 1338 aa19.58■□□□□ 0.72
SREK1-212ENST00000522912 F8W031 263 aaPredicted RBP19.58■□□□□ 0.72
SREK1-212ENST00000522912 PPP2R5BQ15173 497 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms