RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 LAMA4Q16363 1823 aa25.33■■□□□ 1.65
PCM1-210ENST00000518936 PPARAQ07869 468 aa25.33■■□□□ 1.65
PCM1-210ENST00000518936 C8orf34Q49A92 452 aa25.33■■□□□ 1.65
PCM1-210ENST00000518936 ARMC9Q7Z3E5 817 aa25.33■■□□□ 1.65
PCM1-210ENST00000518936 METTL16Q86W50 562 aaKnown RBP25.33■■□□□ 1.65
PCM1-210ENST00000518936 ZNF341Q9BYN7 854 aa25.33■■□□□ 1.65
PCM1-210ENST00000518936 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.33■■□□□ 1.65
PCM1-210ENST00000518936 GINM1Q9NU53 330 aa25.33■■□□□ 1.65
PCM1-210ENST00000518936 DDTLA6NHG4 134 aaPredicted RBP25.32■■□□□ 1.64
PCM1-210ENST00000518936 IREB2P48200 963 aaKnown RBP25.32■■□□□ 1.64
PCM1-210ENST00000518936 TRDNQ13061 729 aa25.32■■□□□ 1.64
PCM1-210ENST00000518936 KRT32Q14532 448 aa25.32■■□□□ 1.64
PCM1-210ENST00000518936 IL25Q9H293 177 aa25.32■■□□□ 1.64
PCM1-210ENST00000518936 CNNM2Q9H8M5 875 aa25.32■■□□□ 1.64
PCM1-210ENST00000518936 RBM8AQ9Y5S9 174 aaKnown RBP25.32■■□□□ 1.64
PCM1-210ENST00000518936 TRPM7Q96QT4 1865 aa25.32■■□□□ 1.64
PCM1-210ENST00000518936 MAP3K10Q02779 954 aa25.31■■□□□ 1.64
PCM1-210ENST00000518936 MKNK2Q9HBH9 465 aa25.31■■□□□ 1.64
PCM1-210ENST00000518936 PTH1RQ03431 593 aa25.3■■□□□ 1.64
PCM1-210ENST00000518936 PPP4R3BQ5MIZ7 849 aa25.3■■□□□ 1.64
PCM1-210ENST00000518936 NBPF12Q5TAG4 269 aaPredicted RBP25.3■■□□□ 1.64
PCM1-210ENST00000518936 C16orf86Q6ZW13 317 aa25.3■■□□□ 1.64
PCM1-210ENST00000518936 ZFPM1Q8IX07 1006 aa25.3■■□□□ 1.64
PCM1-210ENST00000518936 C2orf69Q8N8R5 385 aa25.3■■□□□ 1.64
PCM1-210ENST00000518936 CCDC17Q96LX7 622 aa25.3■■□□□ 1.64
PCM1-210ENST00000518936 MYH8P13535 1937 aa25.29■■□□□ 1.64
PCM1-210ENST00000518936 FOXP2O15409 715 aa25.29■■□□□ 1.64
PCM1-210ENST00000518936 ITGBL1O95965 494 aaPredicted RBP25.29■■□□□ 1.64
PCM1-210ENST00000518936 MFSD6Q6ZSS7 791 aa25.29■■□□□ 1.64
PCM1-210ENST00000518936 SH3BP5LQ7L8J4 393 aa25.29■■□□□ 1.64
PCM1-210ENST00000518936 PLCD1P51178 756 aa25.28■■□□□ 1.64
PCM1-210ENST00000518936 C1QTNF8P60827 252 aa25.28■■□□□ 1.64
PCM1-210ENST00000518936 TTLL12Q14166 644 aaPredicted RBP25.28■■□□□ 1.64
PCM1-210ENST00000518936 AKNAD1Q5T1N1 836 aa25.28■■□□□ 1.64
PCM1-210ENST00000518936 STAG1Q8WVM7 1258 aa25.28■■□□□ 1.64
PCM1-210ENST00000518936 KRT23Q9C075 422 aa25.28■■□□□ 1.64
PCM1-210ENST00000518936 PAPPA2Q9BXP8 1791 aa25.28■■□□□ 1.64
PCM1-210ENST00000518936 GABPAQ06546 454 aa25.27■■□□□ 1.64
PCM1-210ENST00000518936 ZNF444Q8N0Y2 327 aaPredicted RBP25.27■■□□□ 1.64
PCM1-210ENST00000518936 USP26Q9BXU7 913 aa25.27■■□□□ 1.64
PCM1-210ENST00000518936 CELF2O95319 508 aaKnown RBP25.26■■□□□ 1.63
PCM1-210ENST00000518936 NECTIN1Q15223 517 aa25.26■■□□□ 1.63
PCM1-210ENST00000518936 MAP3K11Q16584 847 aa25.26■■□□□ 1.63
PCM1-210ENST00000518936 RALYLQ86SE5 291 aaKnown RBP25.26■■□□□ 1.63
PCM1-210ENST00000518936 IL27Q8NEV9 243 aa25.26■■□□□ 1.63
PCM1-210ENST00000518936 ZNF408Q9H9D4 720 aa25.26■■□□□ 1.63
PCM1-210ENST00000518936 GBA2Q9HCG7 927 aaPredicted RBP25.26■■□□□ 1.63
PCM1-210ENST00000518936 CABP5Q9NP86 173 aa25.26■■□□□ 1.63
PCM1-210ENST00000518936 CSADQ9Y600 493 aa25.26■■□□□ 1.63
PCM1-210ENST00000518936 ORC4O43929 436 aa25.25■■□□□ 1.63
PCM1-210ENST00000518936 CTNND1O60716 968 aaKnown RBP25.25■■□□□ 1.63
PCM1-210ENST00000518936 HSPA4P34932 840 aa25.25■■□□□ 1.63
PCM1-210ENST00000518936 CDK8P49336 464 aa25.25■■□□□ 1.63
PCM1-210ENST00000518936 ANAPC15P60006 121 aa25.25■■□□□ 1.63
PCM1-210ENST00000518936 CERKLQ49MI3 558 aaPredicted RBP25.25■■□□□ 1.63
PCM1-210ENST00000518936 CREB3L3Q68CJ9 461 aa25.25■■□□□ 1.63
PCM1-210ENST00000518936 TATDN1Q6P1N9 297 aa25.25■■□□□ 1.63
PCM1-210ENST00000518936 ESR2Q92731 530 aa25.25■■□□□ 1.63
PCM1-210ENST00000518936 TBC1D2Q9BYX2 928 aa25.25■■□□□ 1.63
PCM1-210ENST00000518936 SCAF8Q9UPN6 1271 aaKnown RBP25.25■■□□□ 1.63
PCM1-210ENST00000518936 PASKQ96RG2 1323 aa25.25■■□□□ 1.63
PCM1-210ENST00000518936 HMGB1P09429 215 aaKnown RBP25.24■■□□□ 1.63
PCM1-210ENST00000518936 PSMA5P28066 241 aa25.24■■□□□ 1.63
PCM1-210ENST00000518936 TSGA10IPQ3SY00 556 aa25.24■■□□□ 1.63
PCM1-210ENST00000518936 CCDC178Q5BJE1 867 aa25.24■■□□□ 1.63
PCM1-210ENST00000518936 ANKRD13AQ8IZ07 590 aa25.24■■□□□ 1.63
PCM1-210ENST00000518936 BACH2Q9BYV9 841 aa25.24■■□□□ 1.63
PCM1-210ENST00000518936 TOMM22Q9NS69 142 aa25.24■■□□□ 1.63
PCM1-210ENST00000518936 TRAF5O00463 557 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 SLC27A2O14975 620 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 ASNSP08243 561 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 CYP21A2P08686 494 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 FGRP09769 529 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 CYP2D6P10635 497 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 HAND2P61296 217 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 SLC4A8Q2Y0W8 1093 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 PRAMEF18Q5VWM3 479 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 MIGA2Q7L4E1 593 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 NCOA7Q8NI08 942 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 KLRG1Q96E93 195 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 WRNIP1Q96S55 665 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 ZNF112Q9UJU3 913 aa25.23■■□□□ 1.63
PCM1-210ENST00000518936 ANGEL1Q9UNK9 670 aaKnown RBP25.23■■□□□ 1.63
PCM1-210ENST00000518936 SIPA1L1O43166 1804 aa25.22■■□□□ 1.63
PCM1-210ENST00000518936 CYP2D7A0A087X1C5 515 aa25.22■■□□□ 1.63
PCM1-210ENST00000518936 MAP3K9P80192 1104 aa25.22■■□□□ 1.63
PCM1-210ENST00000518936 PICK1Q9NRD5 415 aa25.22■■□□□ 1.63
PCM1-210ENST00000518936 CTDSPL2Q05D32 466 aa25.21■■□□□ 1.63
PCM1-210ENST00000518936 IQCA1Q86XH1 822 aa25.21■■□□□ 1.63
PCM1-210ENST00000518936 SSC5DA1L4H1 1573 aa25.2■■□□□ 1.62
PCM1-210ENST00000518936 TSPY2A6NKD2 308 aa25.2■■□□□ 1.62
PCM1-210ENST00000518936 TMEM88BA6NKF7 163 aa25.2■■□□□ 1.62
PCM1-210ENST00000518936 TSPY3P0CV98 308 aa25.2■■□□□ 1.62
PCM1-210ENST00000518936 TSPY8P0CW00 308 aa25.2■■□□□ 1.62
PCM1-210ENST00000518936 CAP2P40123 477 aa25.2■■□□□ 1.62
PCM1-210ENST00000518936 SART3Q15020 963 aaKnown RBP25.2■■□□□ 1.62
PCM1-210ENST00000518936 ABCB5Q2M3G0 1257 aa25.2■■□□□ 1.62
PCM1-210ENST00000518936 NOL9Q5SY16 702 aaKnown RBP25.2■■□□□ 1.62
PCM1-210ENST00000518936 TMEM179Q6ZVK1 233 aa25.2■■□□□ 1.62
PCM1-210ENST00000518936 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms