RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 INO80DQ53TQ3 878 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 LLGL2Q6P1M3 1020 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 POTEBQ6S5H4 581 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 LHFPL2Q6ZUX7 228 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 NLRP8Q86W28 1048 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 SMAP1Q8IYB5 467 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 TCEAL8Q8IYN2 117 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 MAGEB6Q8N7X4 407 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 ANKRD42Q8N9B4 389 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 OR13H1Q8NG92 308 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 C7orf43Q8WVR3 580 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 TIFAQ96CG3 184 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 CLUHP3Q96NS8 147 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 ZIC5Q96T25 663 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 MTA3Q9BTC8 594 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 PAGR1Q9BTK6 254 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 RTFDC1Q9BY42 306 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 EPN3Q9H201 632 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 PTPRHQ9HD43 1115 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 FAM86C1Q9NVL1 165 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 DACH1Q9UI36 760 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 RCAN3Q9UKA8 241 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 CYP8B1Q9UNU6 501 aa4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 LUC7L2Q9Y383 392 aaKnown RBP4.57□□□□□ -1.68
HMGB1P22-201ENST00000505315 A0A1W2PNR3 127 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 RNF223E7ERA6 249 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 CCER2I3L3R5 266 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 BRINP1O60477 761 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 SNUPNO95149 360 aaKnown RBP4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 EGFRP00533 1210 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 FGAP02671 866 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 APPP05067 770 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 NEFMP07197 916 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 MYL3P08590 195 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 PYGMP11217 842 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 PURAQ00577 322 aaKnown RBP4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 SLC7A5Q01650 507 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 RPL6Q02878 288 aaKnown RBP4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 FAAP100Q0VG06 881 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 POU4F2Q12837 409 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 MORC3Q14149 939 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 MAP7Q14244 749 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 HSP90AA2PQ14568 343 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 PTPN21Q16825 1174 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 SLC4A8Q2Y0W8 1093 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 COBLL1Q53SF7 1204 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 PLA2G2CQ5R387 149 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 PRICKLE2Q7Z3G6 844 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 SPATS2Q86XZ4 545 aaKnown RBP4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 ZNF354CQ86Y25 554 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 SULF2Q8IWU5 870 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 SPICE1Q8N0Z3 855 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 CPXCR1Q8N123 301 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 MPNDQ8N594 471 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 CNTD1Q8N815 330 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 ENAHQ8N8S7 591 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 GRIN3AQ8TCU5 1115 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 COG1Q8WTW3 980 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 TMEM40Q8WWA1 233 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 DDX1Q92499 740 aaKnown RBP4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 SLC39A13Q96H72 371 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 EXOC2Q96KP1 924 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 SCLT1Q96NL6 688 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 TTC1Q99614 292 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 GRIP2Q9C0E4 1043 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 PUS7LQ9H0K6 701 aaKnown RBP4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 PHAXQ9H814 394 aaKnown RBP4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 EHMT1Q9H9B1 1298 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 PRDM11Q9NQV5 511 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 OBP2AQ9NY56 170 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 NDOR1Q9UHB4 597 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 LZTS1Q9Y250 596 aa4.56□□□□□ -1.68
HMGB1P22-201ENST00000505315 PHLDB1Q86UU1 1377 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 UPK3BL1B0FP48 263 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 UPK3BL2E5RIL1 263 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 GPR39O43194 453 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 ZNF500O60304 480 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 TCEA3O75764 348 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 EYA4O95677 639 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 U2AF1L5P0DN76 240 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 MYBL2P10244 700 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 NME2P22392 152 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 ITPKAP23677 461 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 GRNP28799 593 aaKnown RBP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 MAN1A1P33908 653 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 RPIAP49247 311 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 WDR4P57081 412 aaKnown RBP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 U2AF1Q01081 240 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 CCINQ13939 588 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 SART3Q15020 963 aaKnown RBP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 PCBP1Q15365 356 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 ZYXQ15942 572 aaKnown RBP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 ARHGAP29Q52LW3 1261 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 RPS26P11Q5JNZ5 115 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 ACBD5Q5T8D3 534 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 NXNQ6DKJ4 435 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 CCDC70Q6NSX1 233 aa4.55□□□□□ -1.68
HMGB1P22-201ENST00000505315 PKN3Q6P5Z2 889 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms