RNA–Protein interactions for RNA: ENST00000504822.1

SH3TC1-209, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 259 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-209ENST00000504822 ZSCAN29Q8IWY8 852 aaPredicted RBP19.57■□□□□ 0.72
SH3TC1-209ENST00000504822 DCPSQ96C86 337 aaKnown RBP19.57■□□□□ 0.72
SH3TC1-209ENST00000504822 TSHZ2Q9NRE2 1034 aa19.57■□□□□ 0.72
SH3TC1-209ENST00000504822 PI4KBQ9UBF8 816 aa19.57■□□□□ 0.72
SH3TC1-209ENST00000504822 GABPAQ06546 454 aa19.56■□□□□ 0.72
SH3TC1-209ENST00000504822 C16orf86Q6ZW13 317 aa19.56■□□□□ 0.72
SH3TC1-209ENST00000504822 NCOA7Q8NI08 942 aa19.56■□□□□ 0.72
SH3TC1-209ENST00000504822 DYNLL2Q96FJ2 89 aa19.56■□□□□ 0.72
SH3TC1-209ENST00000504822 JAKMIP1Q96N16 626 aaKnown RBP19.56■□□□□ 0.72
SH3TC1-209ENST00000504822 NEK1Q96PY6 1258 aa19.56■□□□□ 0.72
SH3TC1-209ENST00000504822 TMEM39BQ9GZU3 492 aa19.56■□□□□ 0.72
SH3TC1-209ENST00000504822 DEFB129Q9H1M3 183 aa19.56■□□□□ 0.72
SH3TC1-209ENST00000504822 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.56■□□□□ 0.72
SH3TC1-209ENST00000504822 PPP2R3BQ9Y5P8 575 aa19.56■□□□□ 0.72
SH3TC1-209ENST00000504822 MYH1P12882 1939 aa19.56■□□□□ 0.72
SH3TC1-209ENST00000504822 LAMA4Q16363 1823 aa19.55■□□□□ 0.72
SH3TC1-209ENST00000504822 ORC4O43929 436 aa19.55■□□□□ 0.72
SH3TC1-209ENST00000504822 PDE4BQ07343 736 aa19.55■□□□□ 0.72
SH3TC1-209ENST00000504822 EAPPQ56P03 285 aaPredicted RBP19.55■□□□□ 0.72
SH3TC1-209ENST00000504822 METTL16Q86W50 562 aaKnown RBP19.55■□□□□ 0.72
SH3TC1-209ENST00000504822 TEPSINQ96N21 525 aa19.55■□□□□ 0.72
SH3TC1-209ENST00000504822 KRT23Q9C075 422 aa19.55■□□□□ 0.72
SH3TC1-209ENST00000504822 CNNM2Q9H8M5 875 aa19.55■□□□□ 0.72
SH3TC1-209ENST00000504822 ZSWIM6Q9HCJ5 1215 aa19.55■□□□□ 0.72
SH3TC1-209ENST00000504822 SERPINB13Q9UIV8 391 aa19.55■□□□□ 0.72
SH3TC1-209ENST00000504822 LAMB1P07942 1786 aa19.55■□□□□ 0.72
SH3TC1-209ENST00000504822 HMGB1P09429 215 aaKnown RBP19.54■□□□□ 0.72
SH3TC1-209ENST00000504822 CDK8P49336 464 aa19.54■□□□□ 0.72
SH3TC1-209ENST00000504822 NT5C2P49902 561 aa19.54■□□□□ 0.72
SH3TC1-209ENST00000504822 TRDNQ13061 729 aa19.54■□□□□ 0.72
SH3TC1-209ENST00000504822 RABEP1Q15276 862 aa19.54■□□□□ 0.72
SH3TC1-209ENST00000504822 STK11IPQ8N1F8 1099 aa19.54■□□□□ 0.72
SH3TC1-209ENST00000504822 CSRNP1Q96S65 589 aa19.54■□□□□ 0.72
SH3TC1-209ENST00000504822 ZNF287Q9HBT7 754 aa19.54■□□□□ 0.72
SH3TC1-209ENST00000504822 INCENPQ9NQS7 918 aa19.54■□□□□ 0.72
SH3TC1-209ENST00000504822 SWAP70Q9UH65 585 aa19.54■□□□□ 0.72
SH3TC1-209ENST00000504822 SCAF8Q9UPN6 1271 aaKnown RBP19.54■□□□□ 0.72
SH3TC1-209ENST00000504822 NEDD4P46934 1319 aa19.53■□□□□ 0.72
SH3TC1-209ENST00000504822 TBC1D12O60347 775 aa19.53■□□□□ 0.72
SH3TC1-209ENST00000504822 RALYLQ86SE5 291 aaKnown RBP19.53■□□□□ 0.72
SH3TC1-209ENST00000504822 IL27Q8NEV9 243 aa19.53■□□□□ 0.72
SH3TC1-209ENST00000504822 NMRK2Q9NPI5 230 aa19.53■□□□□ 0.72
SH3TC1-209ENST00000504822 CASTP20810 708 aaKnown RBP19.52■□□□□ 0.72
SH3TC1-209ENST00000504822 MAP3K10Q02779 954 aa19.52■□□□□ 0.72
SH3TC1-209ENST00000504822 BLOC1S2Q6QNY1 142 aa19.52■□□□□ 0.72
SH3TC1-209ENST00000504822 RUFY3Q7L099 469 aa19.52■□□□□ 0.72
SH3TC1-209ENST00000504822 SULF1Q8IWU6 871 aa19.52■□□□□ 0.72
SH3TC1-209ENST00000504822 MB21D2Q8IYB1 491 aaPredicted RBP19.52■□□□□ 0.72
SH3TC1-209ENST00000504822 CRACR2BQ8N4Y2 399 aaPredicted RBP19.52■□□□□ 0.72
SH3TC1-209ENST00000504822 MKNK2Q9HBH9 465 aa19.52■□□□□ 0.72
SH3TC1-209ENST00000504822 TOMM22Q9NS69 142 aa19.52■□□□□ 0.72
SH3TC1-209ENST00000504822 HERC5Q9UII4 1024 aaKnown RBP19.52■□□□□ 0.72
SH3TC1-209ENST00000504822 CYP46A1Q9Y6A2 500 aa19.52■□□□□ 0.72
SH3TC1-209ENST00000504822 B4E1Z4 1266 aa19.51■□□□□ 0.71
SH3TC1-209ENST00000504822 RRP12Q5JTH9 1297 aaKnown RBP19.51■□□□□ 0.71
SH3TC1-209ENST00000504822 DHX32Q7L7V1 743 aaKnown RBP19.51■□□□□ 0.71
SH3TC1-209ENST00000504822 CDAN1Q8IWY9 1227 aa19.51■□□□□ 0.71
SH3TC1-209ENST00000504822 SLC44A5Q8NCS7 719 aa19.51■□□□□ 0.71
SH3TC1-209ENST00000504822 ZNF526Q8TF50 670 aaPredicted RBP19.51■□□□□ 0.71
SH3TC1-209ENST00000504822 DNAJC18Q9H819 358 aa19.51■□□□□ 0.71
SH3TC1-209ENST00000504822 CLEC11AQ9Y240 323 aa19.51■□□□□ 0.71
SH3TC1-209ENST00000504822 PRDM1O75626 825 aa19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 RASA1P20936 1047 aa19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 RPS6KB1P23443 525 aa19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 SHMT1P34896 483 aa19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 EXOSC10Q01780 885 aaKnown RBP19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 TATDN1Q6P1N9 297 aa19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 CDC37L1Q7L3B6 337 aa19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 KRT26Q7Z3Y9 468 aa19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 ZNF444Q8N0Y2 327 aaPredicted RBP19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 ESR2Q92731 530 aa19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 HOOK2Q96ED9 719 aa19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 TRIM34Q9BYJ4 488 aa19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 UPF3BQ9BZI7 483 aaKnown RBP19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 WDR19Q8NEZ3 1342 aa19.5■□□□□ 0.71
SH3TC1-209ENST00000504822 SIPA1L1O43166 1804 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 KDM4AO75164 1064 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 POTEIP0CG38 1075 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 POTEJP0CG39 1038 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 SLURP2P0DP57 97 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 CPA1P15085 419 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 MCM5P33992 734 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 NEK4P51957 841 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 COL9A3Q14050 684 aaPredicted RBP19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 NBPF12Q5TAG4 269 aaPredicted RBP19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 CYB5R4Q7L1T6 521 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 USP48Q86UV5 1035 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 LDHDQ86WU2 507 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 NKX2-3Q8TAU0 364 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 ZSWIM5Q9P217 1185 aa19.49■□□□□ 0.71
SH3TC1-209ENST00000504822 FAM196BA6NMK8 535 aa19.48■□□□□ 0.71
SH3TC1-209ENST00000504822 ADM5C9JUS6 153 aa19.48■□□□□ 0.71
SH3TC1-209ENST00000504822 RANBP6O60518 1105 aaKnown RBP19.48■□□□□ 0.71
SH3TC1-209ENST00000504822 ANTXR2P58335 489 aa19.48■□□□□ 0.71
SH3TC1-209ENST00000504822 SUPT20HL1Q3ZLR7 823 aa19.48■□□□□ 0.71
SH3TC1-209ENST00000504822 CCDC17Q96LX7 622 aa19.48■□□□□ 0.71
SH3TC1-209ENST00000504822 MTA3Q9BTC8 594 aa19.48■□□□□ 0.71
SH3TC1-209ENST00000504822 ALDH8A1Q9H2A2 487 aaPredicted RBP19.48■□□□□ 0.71
SH3TC1-209ENST00000504822 GPBP1L1Q9HC44 474 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms