RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 NFATC2IPQ8NCF5 419 aa19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 AATKQ6ZMQ8 1374 aa19.32■□□□□ 0.68
HMGXB3-201ENST00000502717 MPHOSPH10O00566 681 aaKnown RBP19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 GNGT1P63211 74 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 BCAS4Q8TDM0 211 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 FAM204AQ9H8W3 233 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 SWAP70Q9UH65 585 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 ARHGAP31Q2M1Z3 1444 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 TIMM10P62072 90 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 PAK2Q13177 524 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 METTL22Q9BUU2 404 aaPredicted RBP19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 MYO1CO00159 1063 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 CCDC172P0C7W6 258 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 HPDP32754 393 aaPredicted RBP19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 NAA30Q147X3 362 aaPredicted RBP19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 RUFY4Q6ZNE9 571 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 CABS1Q96KC9 395 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 TTC14Q96N46 770 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 SELENOSQ9BQE4 189 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 CAPS2Q9BXY5 557 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 UBA5Q9GZZ9 404 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 JRKLQ9Y4A0 524 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 CAPN7Q9Y6W3 813 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 A0A087WUV0 522 aaPredicted RBP19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 PRPHP41219 470 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 CLNS1AP54105 237 aaKnown RBP19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 FBXO18Q8NFZ0 1043 aa19.31■□□□□ 0.68
HMGXB3-201ENST00000502717 CTIFO43310 598 aaKnown RBP19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 TAF5LO75529 589 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 LIG3P49916 1009 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 RESTQ13127 1097 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 CRACR2BQ8N4Y2 399 aaPredicted RBP19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 METP08581 1390 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 GPTP24298 496 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 GNAQP50148 359 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 LRRC45Q96CN5 670 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 HAUS4Q9H6D7 363 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 TAB2Q9NYJ8 693 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 REREQ9P2R6 1566 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 ATP7BP35670 1465 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 DTHD1Q6ZMT9 781 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 CABLES1Q8TDN4 633 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 SERTAD1Q9UHV2 236 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 ADCY9O60503 1353 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 BEND3Q5T5X7 828 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 NOC4LQ9BVI4 516 aaKnown RBP19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 POLR3EQ9NVU0 708 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 MYO1AQ9UBC5 1043 aa19.3■□□□□ 0.68
HMGXB3-201ENST00000502717 CPSF1Q10570 1443 aaKnown RBP19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 B4E1Z4 1266 aa19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 EYA2O00167 538 aa19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 ARID5BQ14865 1188 aa19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 KCNF1Q9H3M0 494 aa19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 FAN1Q9Y2M0 1017 aa19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 OR8K1Q8NGG5 319 aa19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 MCM7P33993 719 aa19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 EIF4A1P60842 406 aaKnown RBP19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 UBE4AQ14139 1066 aa19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 LONRF3Q496Y0 759 aa19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 CLIC4Q9Y696 253 aa19.29■□□□□ 0.68
HMGXB3-201ENST00000502717 ZNF76P36508 570 aa19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 NECTIN1Q15223 517 aa19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 NSUN7Q8NE18 718 aaKnown RBP19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 CETN1Q12798 172 aa19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 ZNF174Q15697 407 aa19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 UBLCP1Q8WVY7 318 aaPredicted RBP19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 FERMT2Q96AC1 680 aa19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 GDAP1L1Q96MZ0 367 aa19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 ORAI2Q96SN7 254 aa19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 TSKSQ9UJT2 592 aa19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 PLEKHG1Q9ULL1 1385 aa19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 IL2RBP14784 551 aa19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 EDC3Q96F86 508 aaKnown RBP19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 NOX5Q96PH1 765 aa19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 OSBPL5Q9H0X9 879 aaPredicted RBP19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 STK32BQ9NY57 414 aa19.28■□□□□ 0.68
HMGXB3-201ENST00000502717 POTEJP0CG39 1038 aa19.27■□□□□ 0.68
HMGXB3-201ENST00000502717 PDIA3P30101 505 aaKnown RBP19.27■□□□□ 0.68
HMGXB3-201ENST00000502717 SSR1P43307 286 aaKnown RBP19.27■□□□□ 0.68
HMGXB3-201ENST00000502717 ADAM21Q9UKJ8 722 aa19.27■□□□□ 0.68
HMGXB3-201ENST00000502717 CCDC144BQ3MJ40 725 aa19.27■□□□□ 0.68
HMGXB3-201ENST00000502717 CCDC26Q8TAB7 109 aa19.27■□□□□ 0.68
HMGXB3-201ENST00000502717 DDX12PQ92771 950 aa19.27■□□□□ 0.68
HMGXB3-201ENST00000502717 CDC5LQ99459 802 aaKnown RBP19.27■□□□□ 0.68
HMGXB3-201ENST00000502717 RBM28Q9NW13 759 aaKnown RBP19.27■□□□□ 0.68
HMGXB3-201ENST00000502717 LACTBP83111 547 aaPredicted RBP19.27■□□□□ 0.68
HMGXB3-201ENST00000502717 CCDC6Q16204 474 aa19.27■□□□□ 0.68
HMGXB3-201ENST00000502717 PLVAPQ9BX97 442 aa19.27■□□□□ 0.68
HMGXB3-201ENST00000502717 PPFIA4O75335 1185 aa19.27■□□□□ 0.67
HMGXB3-201ENST00000502717 PLCD1P51178 756 aa19.27■□□□□ 0.67
HMGXB3-201ENST00000502717 SLC39A14Q15043 492 aa19.27■□□□□ 0.67
HMGXB3-201ENST00000502717 VSTM4Q8IW00 320 aa19.27■□□□□ 0.67
HMGXB3-201ENST00000502717 CTNNBL1Q8WYA6 563 aaPredicted RBP19.27■□□□□ 0.67
HMGXB3-201ENST00000502717 PHKBQ93100 1093 aa19.27■□□□□ 0.67
HMGXB3-201ENST00000502717 TFCP2L1Q9NZI6 479 aa19.27■□□□□ 0.67
HMGXB3-201ENST00000502717 CYP7A1P22680 504 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 RAD51AP2Q09MP3 1159 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 GCKRQ14397 625 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 CDC42BPBQ9Y5S2 1711 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms