RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PRAMEF27A3QJZ7 478 aa7.59□□□□□ -1.19
VPS36-206ENST00000497149 FANCGO15287 622 aa7.59□□□□□ -1.19
VPS36-206ENST00000497149 ATE1O95260 518 aa7.59□□□□□ -1.19
VPS36-206ENST00000497149 ASPAP45381 313 aa7.59□□□□□ -1.19
VPS36-206ENST00000497149 CLCQ05315 142 aa7.59□□□□□ -1.19
VPS36-206ENST00000497149 ZBTB37Q5TC79 503 aa7.59□□□□□ -1.19
VPS36-206ENST00000497149 GK5Q6ZS86 529 aa7.59□□□□□ -1.19
VPS36-206ENST00000497149 TANGO6Q9C0B7 1094 aa7.59□□□□□ -1.19
VPS36-206ENST00000497149 WNT10AQ9GZT5 417 aa7.59□□□□□ -1.19
VPS36-206ENST00000497149 PICK1Q9NRD5 415 aa7.59□□□□□ -1.19
VPS36-206ENST00000497149 FAM105AQ9NUU6 356 aa7.59□□□□□ -1.19
VPS36-206ENST00000497149 PCDHB14Q9Y5E9 798 aa7.59□□□□□ -1.19
VPS36-206ENST00000497149 K7ELQ4 463 aaPredicted RBP7.58□□□□□ -1.2
VPS36-206ENST00000497149 FGRP09769 529 aa7.58□□□□□ -1.2
VPS36-206ENST00000497149 GRK4P32298 578 aa7.58□□□□□ -1.2
VPS36-206ENST00000497149 NTF4P34130 210 aa7.58□□□□□ -1.2
VPS36-206ENST00000497149 TTLL4Q14679 1199 aa7.58□□□□□ -1.2
VPS36-206ENST00000497149 SF3A1Q15459 793 aaKnown RBP7.58□□□□□ -1.2
VPS36-206ENST00000497149 MCF2L2Q86YR7 1114 aa7.58□□□□□ -1.2
VPS36-206ENST00000497149 MEGF10Q96KG7 1140 aa7.58□□□□□ -1.2
VPS36-206ENST00000497149 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.58□□□□□ -1.2
VPS36-206ENST00000497149 CORINQ9Y5Q5 1042 aa7.58□□□□□ -1.2
VPS36-206ENST00000497149 HTR3BO95264 441 aa7.57□□□□□ -1.2
VPS36-206ENST00000497149 HCLS1P14317 486 aaPredicted RBP7.57□□□□□ -1.2
VPS36-206ENST00000497149 USP11P51784 963 aa7.57□□□□□ -1.2
VPS36-206ENST00000497149 ETF1P62495 437 aaKnown RBP7.57□□□□□ -1.2
VPS36-206ENST00000497149 PDE4BQ07343 736 aa7.57□□□□□ -1.2
VPS36-206ENST00000497149 DRC1Q96MC2 740 aa7.57□□□□□ -1.2
VPS36-206ENST00000497149 PPT2Q9UMR5 302 aa7.57□□□□□ -1.2
VPS36-206ENST00000497149 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.56□□□□□ -1.2
VPS36-206ENST00000497149 GAS2O43903 313 aaKnown RBP7.56□□□□□ -1.2
VPS36-206ENST00000497149 RNGTTO60942 597 aaKnown RBP7.56□□□□□ -1.2
VPS36-206ENST00000497149 NEFMP07197 916 aa7.56□□□□□ -1.2
VPS36-206ENST00000497149 PLCG1P19174 1290 aa7.56□□□□□ -1.2
VPS36-206ENST00000497149 UVSSAQ2YD98 709 aa7.56□□□□□ -1.2
VPS36-206ENST00000497149 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.56□□□□□ -1.2
VPS36-206ENST00000497149 ZNF507Q8TCN5 953 aa7.56□□□□□ -1.2
VPS36-206ENST00000497149 FERD3LQ96RJ6 166 aa7.56□□□□□ -1.2
VPS36-206ENST00000497149 SSBP4Q9BWG4 385 aaPredicted RBP7.56□□□□□ -1.2
VPS36-206ENST00000497149 PIDD1Q9HB75 910 aa7.56□□□□□ -1.2
VPS36-206ENST00000497149 ADAM30Q9UKF2 790 aa7.56□□□□□ -1.2
VPS36-206ENST00000497149 STRIP2Q9ULQ0 834 aa7.56□□□□□ -1.2
VPS36-206ENST00000497149 ZNRF3Q9ULT6 936 aa7.56□□□□□ -1.2
VPS36-206ENST00000497149 PGRP06401 933 aa7.55□□□□□ -1.2
VPS36-206ENST00000497149 ATP2B1P20020 1258 aa7.55□□□□□ -1.2
VPS36-206ENST00000497149 TMEM201Q5SNT2 666 aa7.55□□□□□ -1.2
VPS36-206ENST00000497149 CDPF1Q6NVV7 123 aa7.55□□□□□ -1.2
VPS36-206ENST00000497149 SMYD4Q8IYR2 804 aaPredicted RBP7.55□□□□□ -1.2
VPS36-206ENST00000497149 ARMC10Q8N2F6 343 aa7.55□□□□□ -1.2
VPS36-206ENST00000497149 CPLX3Q8WVH0 158 aa7.55□□□□□ -1.2
VPS36-206ENST00000497149 ISL2Q96A47 359 aa7.55□□□□□ -1.2
VPS36-206ENST00000497149 MYRFLQ96LU7 910 aa7.55□□□□□ -1.2
VPS36-206ENST00000497149 SRRTQ9BXP5 876 aaKnown RBP7.55□□□□□ -1.2
VPS36-206ENST00000497149 ACSS3Q9H6R3 686 aa7.55□□□□□ -1.2
VPS36-206ENST00000497149 REV1Q9UBZ9 1251 aa7.55□□□□□ -1.2
VPS36-206ENST00000497149 SSBP05455 408 aaKnown RBP eCLIP7.54□□□□□ -1.2
VPS36-206ENST00000497149 IMPDH2P12268 514 aa7.54□□□□□ -1.2
VPS36-206ENST00000497149 BMP3P12645 472 aa7.54□□□□□ -1.2
VPS36-206ENST00000497149 GATA4P43694 442 aa7.54□□□□□ -1.2
VPS36-206ENST00000497149 SGO2Q562F6 1265 aa7.54□□□□□ -1.2
VPS36-206ENST00000497149 FBXW10Q5XX13 1052 aa7.54□□□□□ -1.2
VPS36-206ENST00000497149 CCDC81Q6ZN84 652 aa7.54□□□□□ -1.2
VPS36-206ENST00000497149 CDC37L1Q7L3B6 337 aa7.54□□□□□ -1.2
VPS36-206ENST00000497149 HID1Q8IV36 788 aa7.54□□□□□ -1.2
VPS36-206ENST00000497149 KCT2Q8NC54 265 aa7.54□□□□□ -1.2
VPS36-206ENST00000497149 FBLIM1Q8WUP2 373 aa7.54□□□□□ -1.2
VPS36-206ENST00000497149 UTP4Q969X6 686 aaKnown RBP7.54□□□□□ -1.2
VPS36-206ENST00000497149 SSU72Q9NP77 194 aaKnown RBP7.54□□□□□ -1.2
VPS36-206ENST00000497149 PPP1R1BQ9UD71 204 aaPredicted RBP7.54□□□□□ -1.2
VPS36-206ENST00000497149 PCOLCE2Q9UKZ9 415 aa7.54□□□□□ -1.2
VPS36-206ENST00000497149 RAB6AP20340 208 aa7.53□□□□□ -1.2
VPS36-206ENST00000497149 MLECQ14165 292 aa7.53□□□□□ -1.2
VPS36-206ENST00000497149 UBE3DQ7Z6J8 389 aa7.53□□□□□ -1.2
VPS36-206ENST00000497149 MCATQ8IVS2 390 aaKnown RBP7.53□□□□□ -1.2
VPS36-206ENST00000497149 FAM20CQ8IXL6 584 aa7.53□□□□□ -1.2
VPS36-206ENST00000497149 RBBP8NLQ8NC74 664 aaPredicted RBP7.53□□□□□ -1.2
VPS36-206ENST00000497149 EZH1Q92800 747 aaPredicted RBP7.53□□□□□ -1.2
VPS36-206ENST00000497149 ACSF2Q96CM8 615 aaPredicted RBP7.53□□□□□ -1.2
VPS36-206ENST00000497149 SHDQ96IW2 340 aa7.53□□□□□ -1.2
VPS36-206ENST00000497149 CRBNQ96SW2 442 aa7.53□□□□□ -1.2
VPS36-206ENST00000497149 YIPF2Q9BWQ6 316 aa7.53□□□□□ -1.2
VPS36-206ENST00000497149 SEMA6CQ9H3T2 930 aa7.53□□□□□ -1.2
VPS36-206ENST00000497149 FBRSQ9HAH7 460 aa7.53□□□□□ -1.2
VPS36-206ENST00000497149 USP35Q9P2H5 1018 aa7.53□□□□□ -1.2
VPS36-206ENST00000497149 TJP2Q9UDY2 1190 aa7.53□□□□□ -1.2
VPS36-206ENST00000497149 SLC22A31A6NKX4 558 aa7.52□□□□□ -1.21
VPS36-206ENST00000497149 NFICP08651 508 aa7.52□□□□□ -1.21
VPS36-206ENST00000497149 MAP4P27816 1152 aaKnown RBP7.52□□□□□ -1.21
VPS36-206ENST00000497149 GIPRP48546 466 aa7.52□□□□□ -1.21
VPS36-206ENST00000497149 EIF6P56537 245 aaKnown RBP7.52□□□□□ -1.21
VPS36-206ENST00000497149 NKG7Q16617 165 aa7.52□□□□□ -1.21
VPS36-206ENST00000497149 LRRFIP1Q32MZ4 808 aaKnown RBP7.52□□□□□ -1.21
VPS36-206ENST00000497149 SLC6A19Q695T7 634 aa7.52□□□□□ -1.21
VPS36-206ENST00000497149 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS36-206ENST00000497149 ANTXR1Q9H6X2 564 aa7.52□□□□□ -1.21
VPS36-206ENST00000497149 MRVI1Q9Y6F6 885 aa7.52□□□□□ -1.21
VPS36-206ENST00000497149 DHX15O43143 795 aaKnown RBP7.51□□□□□ -1.21
VPS36-206ENST00000497149 DNAJA2O60884 412 aa7.51□□□□□ -1.21
VPS36-206ENST00000497149 RXRBP28702 533 aa7.51□□□□□ -1.21
VPS36-206ENST00000497149 GTF2F1P35269 517 aaKnown RBP eCLIP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 279.1 ms