RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 PHF20L1A8MW92 1017 aa23.33■■□□□ 1.33
HDAC4-212ENST00000495497 HLA-DOAP06340 250 aa23.33■■□□□ 1.33
HDAC4-212ENST00000495497 SLC10A3P09131 477 aa23.33■■□□□ 1.33
HDAC4-212ENST00000495497 ECE1P42892 770 aa23.33■■□□□ 1.33
HDAC4-212ENST00000495497 PLCD1P51178 756 aa23.33■■□□□ 1.33
HDAC4-212ENST00000495497 ATP8A2Q9NTI2 1148 aa23.33■■□□□ 1.33
HDAC4-212ENST00000495497 CYP2D7A0A087X1C5 515 aa23.32■■□□□ 1.32
HDAC4-212ENST00000495497 SMIM22K7EJ46 135 aa23.32■■□□□ 1.32
HDAC4-212ENST00000495497 TBC1D12O60347 775 aa23.32■■□□□ 1.32
HDAC4-212ENST00000495497 CNKSR2Q8WXI2 1034 aa23.32■■□□□ 1.32
HDAC4-212ENST00000495497 DNAJC18Q9H819 358 aa23.32■■□□□ 1.32
HDAC4-212ENST00000495497 SNCAIPQ9Y6H5 919 aa23.32■■□□□ 1.32
HDAC4-212ENST00000495497 APPP05067 770 aa23.31■■□□□ 1.32
HDAC4-212ENST00000495497 RRP1BQ14684 758 aaKnown RBP23.31■■□□□ 1.32
HDAC4-212ENST00000495497 MCMDC2Q4G0Z9 681 aa23.31■■□□□ 1.32
HDAC4-212ENST00000495497 CWC27Q6UX04 472 aaKnown RBP23.31■■□□□ 1.32
HDAC4-212ENST00000495497 TTC6Q86TZ1 520 aa23.31■■□□□ 1.32
HDAC4-212ENST00000495497 TICAM2Q86XR7 235 aa23.31■■□□□ 1.32
HDAC4-212ENST00000495497 FOXP4Q8IVH2 680 aaPredicted RBP23.31■■□□□ 1.32
HDAC4-212ENST00000495497 CRACR2BQ8N4Y2 399 aaPredicted RBP23.31■■□□□ 1.32
HDAC4-212ENST00000495497 CCDC102AQ96A19 550 aa23.31■■□□□ 1.32
HDAC4-212ENST00000495497 EPB41L4AQ9HCS5 686 aaPredicted RBP23.31■■□□□ 1.32
HDAC4-212ENST00000495497 DIAPH3Q9NSV4 1193 aa23.31■■□□□ 1.32
HDAC4-212ENST00000495497 CSADQ9Y600 493 aa23.31■■□□□ 1.32
HDAC4-212ENST00000495497 PATL2C9JE40 543 aaKnown RBP23.3■■□□□ 1.32
HDAC4-212ENST00000495497 USP17L12C9JPN9 530 aa23.3■■□□□ 1.32
HDAC4-212ENST00000495497 USP17L21D6R901 530 aa23.3■■□□□ 1.32
HDAC4-212ENST00000495497 GJA5P36382 358 aa23.3■■□□□ 1.32
HDAC4-212ENST00000495497 CTR9Q6PD62 1173 aa23.3■■□□□ 1.32
HDAC4-212ENST00000495497 ZNF589Q86UQ0 364 aaPredicted RBP23.3■■□□□ 1.32
HDAC4-212ENST00000495497 METTL16Q86W50 562 aaKnown RBP23.3■■□□□ 1.32
HDAC4-212ENST00000495497 TRIM34Q9BYJ4 488 aa23.3■■□□□ 1.32
HDAC4-212ENST00000495497 HERC5Q9UII4 1024 aaKnown RBP23.3■■□□□ 1.32
HDAC4-212ENST00000495497 SIPA1L1O43166 1804 aa23.29■■□□□ 1.32
HDAC4-212ENST00000495497 UNCXA6NJT0 531 aa23.29■■□□□ 1.32
HDAC4-212ENST00000495497 GNAT2P19087 354 aa23.29■■□□□ 1.32
HDAC4-212ENST00000495497 VPS53Q5VIR6 699 aa23.29■■□□□ 1.32
HDAC4-212ENST00000495497 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.29■■□□□ 1.32
HDAC4-212ENST00000495497 OTOFQ9HC10 1997 aa23.29■■□□□ 1.32
HDAC4-212ENST00000495497 NAV1Q8NEY1 1877 aa23.28■■□□□ 1.32
HDAC4-212ENST00000495497 MYH1P12882 1939 aa23.28■■□□□ 1.32
HDAC4-212ENST00000495497 HIP1O00291 1037 aa23.28■■□□□ 1.32
HDAC4-212ENST00000495497 FOXP2O15409 715 aa23.28■■□□□ 1.32
HDAC4-212ENST00000495497 SPRYD7Q5W111 196 aa23.28■■□□□ 1.32
HDAC4-212ENST00000495497 IFNL3Q8IZI9 196 aa23.28■■□□□ 1.32
HDAC4-212ENST00000495497 OPTNQ96CV9 577 aa23.28■■□□□ 1.32
HDAC4-212ENST00000495497 DYNLL2Q96FJ2 89 aa23.28■■□□□ 1.32
HDAC4-212ENST00000495497 DDRGK1Q96HY6 314 aa23.28■■□□□ 1.32
HDAC4-212ENST00000495497 WNK4Q96J92 1243 aa23.28■■□□□ 1.32
HDAC4-212ENST00000495497 SERPINB13Q9UIV8 391 aa23.28■■□□□ 1.32
HDAC4-212ENST00000495497 DDX60LQ5H9U9 1706 aaKnown RBP23.28■■□□□ 1.32
HDAC4-212ENST00000495497 TDO2P48775 406 aa23.27■■□□□ 1.32
HDAC4-212ENST00000495497 KIF23Q02241 960 aaPredicted RBP23.27■■□□□ 1.32
HDAC4-212ENST00000495497 C12orf60Q5U649 245 aa23.27■■□□□ 1.32
HDAC4-212ENST00000495497 EHD4Q9H223 541 aa23.27■■□□□ 1.32
HDAC4-212ENST00000495497 IL25Q9H293 177 aa23.27■■□□□ 1.32
HDAC4-212ENST00000495497 CHMLP26374 656 aa23.26■■□□□ 1.31
HDAC4-212ENST00000495497 JAG1P78504 1218 aa23.26■■□□□ 1.31
HDAC4-212ENST00000495497 NOGQ13253 232 aa23.26■■□□□ 1.31
HDAC4-212ENST00000495497 SHROOM1Q2M3G4 852 aaPredicted RBP23.26■■□□□ 1.31
HDAC4-212ENST00000495497 NOL9Q5SY16 702 aaKnown RBP23.26■■□□□ 1.31
HDAC4-212ENST00000495497 GIMAP6Q6P9H5 292 aa23.26■■□□□ 1.31
HDAC4-212ENST00000495497 CCDC84Q86UT8 332 aaPredicted RBP23.26■■□□□ 1.31
HDAC4-212ENST00000495497 SCYL3Q8IZE3 742 aa23.26■■□□□ 1.31
HDAC4-212ENST00000495497 OTUD5Q96G74 571 aa23.26■■□□□ 1.31
HDAC4-212ENST00000495497 MINDY4BA8MYZ0 360 aa23.25■■□□□ 1.31
HDAC4-212ENST00000495497 CTNND1O60716 968 aaKnown RBP23.25■■□□□ 1.31
HDAC4-212ENST00000495497 GDF11O95390 407 aa23.25■■□□□ 1.31
HDAC4-212ENST00000495497 GABPAQ06546 454 aa23.25■■□□□ 1.31
HDAC4-212ENST00000495497 STK11IPQ8N1F8 1099 aa23.25■■□□□ 1.31
HDAC4-212ENST00000495497 SLC44A5Q8NCS7 719 aa23.25■■□□□ 1.31
HDAC4-212ENST00000495497 ARPP21Q9UBL0 812 aaPredicted RBP23.25■■□□□ 1.31
HDAC4-212ENST00000495497 CCDC171Q6TFL3 1326 aa23.25■■□□□ 1.31
HDAC4-212ENST00000495497 SPDYE5A6NIY4 337 aa23.24■■□□□ 1.31
HDAC4-212ENST00000495497 SHMT1P34896 483 aa23.24■■□□□ 1.31
HDAC4-212ENST00000495497 MAP2K2P36507 400 aa23.24■■□□□ 1.31
HDAC4-212ENST00000495497 SBK1Q52WX2 424 aa23.24■■□□□ 1.31
HDAC4-212ENST00000495497 AMOTL1Q8IY63 956 aa23.24■■□□□ 1.31
HDAC4-212ENST00000495497 JMYQ8N9B5 988 aa23.24■■□□□ 1.31
HDAC4-212ENST00000495497 NACAP1Q9BZK3 213 aa23.24■■□□□ 1.31
HDAC4-212ENST00000495497 BAZ2AQ9UIF9 1905 aaKnown RBP23.23■■□□□ 1.31
HDAC4-212ENST00000495497 HSPD1P10809 573 aaKnown RBP23.23■■□□□ 1.31
HDAC4-212ENST00000495497 CAP2P40123 477 aa23.23■■□□□ 1.31
HDAC4-212ENST00000495497 BMP2KLQ5H9B9 411 aa23.23■■□□□ 1.31
HDAC4-212ENST00000495497 TATDN1Q6P1N9 297 aa23.23■■□□□ 1.31
HDAC4-212ENST00000495497 ERO1BQ86YB8 467 aa23.23■■□□□ 1.31
HDAC4-212ENST00000495497 NAPBQ9H115 298 aa23.23■■□□□ 1.31
HDAC4-212ENST00000495497 ZBTB48P10074 688 aaPredicted RBP23.22■■□□□ 1.31
HDAC4-212ENST00000495497 PTPRAP18433 802 aa23.22■■□□□ 1.31
HDAC4-212ENST00000495497 PICK1Q9NRD5 415 aa23.22■■□□□ 1.31
HDAC4-212ENST00000495497 IRF6O14896 467 aa23.21■■□□□ 1.31
HDAC4-212ENST00000495497 CDK8P49336 464 aa23.21■■□□□ 1.31
HDAC4-212ENST00000495497 PPATQ06203 517 aa23.21■■□□□ 1.31
HDAC4-212ENST00000495497 CERKLQ49MI3 558 aaPredicted RBP23.21■■□□□ 1.31
HDAC4-212ENST00000495497 ZHX2Q9Y6X8 837 aa23.21■■□□□ 1.31
HDAC4-212ENST00000495497 MFAP1P55081 439 aaKnown RBP23.2■■□□□ 1.3
HDAC4-212ENST00000495497 PPIL2Q13356 520 aa23.2■■□□□ 1.3
HDAC4-212ENST00000495497 C16orf86Q6ZW13 317 aa23.2■■□□□ 1.3
HDAC4-212ENST00000495497 FGAP02671 866 aa23.19■■□□□ 1.3
HDAC4-212ENST00000495497 SWAP70Q9UH65 585 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms