RNA–Protein interactions for RNA: ENST00000491291.1

PGK1-205, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 5

Gene PGK1, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-205ENST00000491291 DEFB129Q9H1M3 183 aa10.63□□□□□ -0.71
PGK1-205ENST00000491291 RNF41Q9H4P4 317 aaPredicted RBP10.63□□□□□ -0.71
PGK1-205ENST00000491291 TOMM22Q9NS69 142 aa10.63□□□□□ -0.71
PGK1-205ENST00000491291 PI4KBQ9UBF8 816 aa10.63□□□□□ -0.71
PGK1-205ENST00000491291 SCAF8Q9UPN6 1271 aaKnown RBP10.63□□□□□ -0.71
PGK1-205ENST00000491291 TAF6LQ9Y6J9 622 aa10.63□□□□□ -0.71
PGK1-205ENST00000491291 SMIM22K7EJ46 135 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 PCP11498 1178 aaKnown RBP10.62□□□□□ -0.71
PGK1-205ENST00000491291 PSMA5P28066 241 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 ADCK5Q3MIX3 580 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 RRP12Q5JTH9 1297 aaKnown RBP10.62□□□□□ -0.71
PGK1-205ENST00000491291 STOX1Q6ZVD7 989 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 RALYLQ86SE5 291 aaKnown RBP10.62□□□□□ -0.71
PGK1-205ENST00000491291 SULF1Q8IWU6 871 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 NCOA7Q8NI08 942 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 IL17RAQ96F46 866 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 DYNLL2Q96FJ2 89 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 NEK1Q96PY6 1258 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 CSRNP1Q96S65 589 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 KRT23Q9C075 422 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 EHD4Q9H223 541 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 CNNM2Q9H8M5 875 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 MKNK2Q9HBH9 465 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 ZNF287Q9HBT7 754 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 NMRK2Q9NPI5 230 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 SERPINB13Q9UIV8 391 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 CLEC11AQ9Y240 323 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 PPP2R3BQ9Y5P8 575 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 SRCAPQ6ZRS2 3230 aa10.62□□□□□ -0.71
PGK1-205ENST00000491291 NEDD4P46934 1319 aa10.61□□□□□ -0.71
PGK1-205ENST00000491291 B4E1Z4 1266 aa10.61□□□□□ -0.71
PGK1-205ENST00000491291 HMGB1P09429 215 aaKnown RBP10.61□□□□□ -0.71
PGK1-205ENST00000491291 CASTP20810 708 aaKnown RBP10.61□□□□□ -0.71
PGK1-205ENST00000491291 BLOC1S2Q6QNY1 142 aa10.61□□□□□ -0.71
PGK1-205ENST00000491291 C16orf86Q6ZW13 317 aa10.61□□□□□ -0.71
PGK1-205ENST00000491291 FOXP4Q8IVH2 680 aaPredicted RBP10.61□□□□□ -0.71
PGK1-205ENST00000491291 TM6SF1Q9BZW5 370 aa10.61□□□□□ -0.71
PGK1-205ENST00000491291 INCENPQ9NQS7 918 aa10.61□□□□□ -0.71
PGK1-205ENST00000491291 TSHZ2Q9NRE2 1034 aa10.61□□□□□ -0.71
PGK1-205ENST00000491291 SWAP70Q9UH65 585 aa10.61□□□□□ -0.71
PGK1-205ENST00000491291 PGAP2Q9UHJ9 254 aa10.61□□□□□ -0.71
PGK1-205ENST00000491291 TAOK2Q9UL54 1235 aa10.61□□□□□ -0.71
PGK1-205ENST00000491291 TACC3Q9Y6A5 838 aa10.61□□□□□ -0.71
PGK1-205ENST00000491291 TRPM7Q96QT4 1865 aa10.61□□□□□ -0.71
PGK1-205ENST00000491291 MYH4Q9Y623 1939 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 DOCK1Q14185 1865 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 ADM5C9JUS6 153 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 ORC4O43929 436 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 RANBP6O60518 1105 aaKnown RBP10.6□□□□□ -0.71
PGK1-205ENST00000491291 PRDM1O75626 825 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 CDK8P49336 464 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 GABPAQ06546 454 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 RABEP1Q15276 862 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 KRT26Q7Z3Y9 468 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 LDHDQ86WU2 507 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 SLC44A5Q8NCS7 719 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 ESR2Q92731 530 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 HOOK2Q96ED9 719 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 TEPSINQ96N21 525 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 KIF2CQ99661 725 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.6□□□□□ -0.71
PGK1-205ENST00000491291 HERC5Q9UII4 1024 aaKnown RBP10.6□□□□□ -0.71
PGK1-205ENST00000491291 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.6□□□□□ -0.71
PGK1-205ENST00000491291 CYP46A1Q9Y6A2 500 aa10.6□□□□□ -0.71
PGK1-205ENST00000491291 GREB1LQ9C091 1923 aaPredicted RBP10.6□□□□□ -0.71
PGK1-205ENST00000491291 TSPY2A6NKD2 308 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 FAM196BA6NMK8 535 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 TBC1D12O60347 775 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 FGRP09769 529 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 CPA1P15085 419 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 RPS6KB1P23443 525 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 NT5C2P49902 561 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 SUPT20HL1Q3ZLR7 823 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 NBPF12Q5TAG4 269 aaPredicted RBP10.59□□□□□ -0.71
PGK1-205ENST00000491291 DCAF15Q66K64 600 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 RUFY3Q7L099 469 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 CDC37L1Q7L3B6 337 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 DHX32Q7L7V1 743 aaKnown RBP10.59□□□□□ -0.71
PGK1-205ENST00000491291 USP48Q86UV5 1035 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 METTL16Q86W50 562 aaKnown RBP10.59□□□□□ -0.71
PGK1-205ENST00000491291 CDAN1Q8IWY9 1227 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 MB21D2Q8IYB1 491 aaPredicted RBP10.59□□□□□ -0.71
PGK1-205ENST00000491291 ZNF444Q8N0Y2 327 aaPredicted RBP10.59□□□□□ -0.71
PGK1-205ENST00000491291 UPF3BQ9BZI7 483 aaKnown RBP10.59□□□□□ -0.71
PGK1-205ENST00000491291 GPBP1L1Q9HC44 474 aaPredicted RBP10.59□□□□□ -0.71
PGK1-205ENST00000491291 ZSWIM6Q9HCJ5 1215 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 OTOFQ9HC10 1997 aa10.59□□□□□ -0.71
PGK1-205ENST00000491291 KDM4AO75164 1064 aa10.58□□□□□ -0.72
PGK1-205ENST00000491291 POTEIP0CG38 1075 aa10.58□□□□□ -0.72
PGK1-205ENST00000491291 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
PGK1-205ENST00000491291 TSPY3P0CV98 308 aa10.58□□□□□ -0.72
PGK1-205ENST00000491291 TSPY8P0CW00 308 aa10.58□□□□□ -0.72
PGK1-205ENST00000491291 SLURP2P0DP57 97 aa10.58□□□□□ -0.72
PGK1-205ENST00000491291 RASA1P20936 1047 aa10.58□□□□□ -0.72
PGK1-205ENST00000491291 MCM5P33992 734 aa10.58□□□□□ -0.72
PGK1-205ENST00000491291 SHMT1P34896 483 aa10.58□□□□□ -0.72
PGK1-205ENST00000491291 NEK4P51957 841 aa10.58□□□□□ -0.72
PGK1-205ENST00000491291 TFAP4Q01664 338 aa10.58□□□□□ -0.72
PGK1-205ENST00000491291 FAM47AQ5JRC9 791 aa10.58□□□□□ -0.72
PGK1-205ENST00000491291 PRAMEF18Q5VWM3 479 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms