RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 DZIP1LQ8IYY4 767 aaKnown RBP6.24□□□□□ -1.41
CD46-216ENST00000490278 REXO1Q8N1G1 1221 aaKnown RBP6.24□□□□□ -1.41
CD46-216ENST00000490278 RNF214Q8ND24 703 aa6.24□□□□□ -1.41
CD46-216ENST00000490278 FAM46AQ96IP4 442 aaKnown RBP6.24□□□□□ -1.41
CD46-216ENST00000490278 MEGF10Q96KG7 1140 aa6.24□□□□□ -1.41
CD46-216ENST00000490278 GMLQ99445 158 aa6.24□□□□□ -1.41
CD46-216ENST00000490278 POLR3KQ9Y2Y1 108 aaPredicted RBP6.24□□□□□ -1.41
CD46-216ENST00000490278 ACTL7BQ9Y614 415 aa6.24□□□□□ -1.41
CD46-216ENST00000490278 FANCGO15287 622 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 GRIN3BO60391 1043 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 NASPP49321 788 aaPredicted RBP6.23□□□□□ -1.41
CD46-216ENST00000490278 USP11P51784 963 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 ETF1P62495 437 aaKnown RBP6.23□□□□□ -1.41
CD46-216ENST00000490278 PDE4BQ07343 736 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 TTLL4Q14679 1199 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 SF3A1Q15459 793 aaKnown RBP6.23□□□□□ -1.41
CD46-216ENST00000490278 ZBTB37Q5TC79 503 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 GK5Q6ZS86 529 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 KRTAP1-3Q8IUG1 177 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 WNT10AQ9GZT5 417 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 PIDD1Q9HB75 910 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 FAM105AQ9NUU6 356 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 PRKAG2Q9UGJ0 569 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 PCDHB14Q9Y5E9 798 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 PRR36Q9H6K5 1346 aa6.23□□□□□ -1.41
CD46-216ENST00000490278 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.22□□□□□ -1.41
CD46-216ENST00000490278 HCLS1P14317 486 aaPredicted RBP6.22□□□□□ -1.41
CD46-216ENST00000490278 GRK4P32298 578 aa6.22□□□□□ -1.41
CD46-216ENST00000490278 CLCQ05315 142 aa6.22□□□□□ -1.41
CD46-216ENST00000490278 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.22□□□□□ -1.41
CD46-216ENST00000490278 SREK1Q8WXA9 508 aaKnown RBP6.22□□□□□ -1.41
CD46-216ENST00000490278 UTP4Q969X6 686 aaKnown RBP6.22□□□□□ -1.41
CD46-216ENST00000490278 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.22□□□□□ -1.41
CD46-216ENST00000490278 EHMT1Q9H9B1 1298 aa6.22□□□□□ -1.41
CD46-216ENST00000490278 CORINQ9Y5Q5 1042 aa6.22□□□□□ -1.41
CD46-216ENST00000490278 RNGTTO60942 597 aaKnown RBP6.21□□□□□ -1.42
CD46-216ENST00000490278 ATE1O95260 518 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 HTR3BO95264 441 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 PGRP06401 933 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 NEFMP07197 916 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 FGRP09769 529 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 PLCG1P19174 1290 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 NTF4P34130 210 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 GATA4P43694 442 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 CDPF1Q6NVV7 123 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 CDC37L1Q7L3B6 337 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 ZNF507Q8TCN5 953 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 MYRFLQ96LU7 910 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 YIPF2Q9BWQ6 316 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 TANGO6Q9C0B7 1094 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 ACSS3Q9H6R3 686 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 ADAM30Q9UKF2 790 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 STRIP2Q9ULQ0 834 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 PPT2Q9UMR5 302 aa6.21□□□□□ -1.42
CD46-216ENST00000490278 IMPDH2P12268 514 aa6.2□□□□□ -1.42
CD46-216ENST00000490278 BMP3P12645 472 aa6.2□□□□□ -1.42
CD46-216ENST00000490278 RAB6AP20340 208 aa6.2□□□□□ -1.42
CD46-216ENST00000490278 MLECQ14165 292 aa6.2□□□□□ -1.42
CD46-216ENST00000490278 MCF2L2Q86YR7 1114 aa6.2□□□□□ -1.42
CD46-216ENST00000490278 SMYD4Q8IYR2 804 aaPredicted RBP6.2□□□□□ -1.42
CD46-216ENST00000490278 ARMC10Q8N2F6 343 aa6.2□□□□□ -1.42
CD46-216ENST00000490278 KCT2Q8NC54 265 aa6.2□□□□□ -1.42
CD46-216ENST00000490278 CPLX3Q8WVH0 158 aa6.2□□□□□ -1.42
CD46-216ENST00000490278 FERD3LQ96RJ6 166 aa6.2□□□□□ -1.42
CD46-216ENST00000490278 SSBP4Q9BWG4 385 aaPredicted RBP6.2□□□□□ -1.42
CD46-216ENST00000490278 SSU72Q9NP77 194 aaKnown RBP6.2□□□□□ -1.42
CD46-216ENST00000490278 REV1Q9UBZ9 1251 aa6.2□□□□□ -1.42
CD46-216ENST00000490278 PCOLCE2Q9UKZ9 415 aa6.2□□□□□ -1.42
CD46-216ENST00000490278 ZNRF3Q9ULT6 936 aa6.2□□□□□ -1.42
CD46-216ENST00000490278 DHX15O43143 795 aaKnown RBP6.19□□□□□ -1.42
CD46-216ENST00000490278 SSBP05455 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
CD46-216ENST00000490278 ATP2B1P20020 1258 aa6.19□□□□□ -1.42
CD46-216ENST00000490278 SGO2Q562F6 1265 aa6.19□□□□□ -1.42
CD46-216ENST00000490278 TMEM201Q5SNT2 666 aa6.19□□□□□ -1.42
CD46-216ENST00000490278 FBXW10Q5XX13 1052 aa6.19□□□□□ -1.42
CD46-216ENST00000490278 CCDC81Q6ZN84 652 aa6.19□□□□□ -1.42
CD46-216ENST00000490278 HID1Q8IV36 788 aa6.19□□□□□ -1.42
CD46-216ENST00000490278 FAM20CQ8IXL6 584 aa6.19□□□□□ -1.42
CD46-216ENST00000490278 FBLIM1Q8WUP2 373 aa6.19□□□□□ -1.42
CD46-216ENST00000490278 EZH1Q92800 747 aaPredicted RBP6.19□□□□□ -1.42
CD46-216ENST00000490278 ISL2Q96A47 359 aa6.19□□□□□ -1.42
CD46-216ENST00000490278 DRC1Q96MC2 740 aa6.19□□□□□ -1.42
CD46-216ENST00000490278 SRRTQ9BXP5 876 aaKnown RBP6.19□□□□□ -1.42
CD46-216ENST00000490278 SEMA6CQ9H3T2 930 aa6.19□□□□□ -1.42
CD46-216ENST00000490278 NFICP08651 508 aa6.18□□□□□ -1.42
CD46-216ENST00000490278 MAP4P27816 1152 aaKnown RBP6.18□□□□□ -1.42
CD46-216ENST00000490278 RXRBP28702 533 aa6.18□□□□□ -1.42
CD46-216ENST00000490278 EIF6P56537 245 aaKnown RBP6.18□□□□□ -1.42
CD46-216ENST00000490278 MAP7Q14244 749 aa6.18□□□□□ -1.42
CD46-216ENST00000490278 LRRFIP1Q32MZ4 808 aaKnown RBP6.18□□□□□ -1.42
CD46-216ENST00000490278 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.18□□□□□ -1.42
CD46-216ENST00000490278 ACSF2Q96CM8 615 aaPredicted RBP6.18□□□□□ -1.42
CD46-216ENST00000490278 CRBNQ96SW2 442 aa6.18□□□□□ -1.42
CD46-216ENST00000490278 KCNF1Q9H3M0 494 aa6.18□□□□□ -1.42
CD46-216ENST00000490278 FBRSQ9HAH7 460 aa6.18□□□□□ -1.42
CD46-216ENST00000490278 TJP2Q9UDY2 1190 aa6.18□□□□□ -1.42
CD46-216ENST00000490278 DAGLAQ9Y4D2 1042 aa6.18□□□□□ -1.42
CD46-216ENST00000490278 FAM95CA0A1B0GW59 222 aa6.17□□□□□ -1.42
CD46-216ENST00000490278 FURINP09958 794 aa6.17□□□□□ -1.42
CD46-216ENST00000490278 CAP2P40123 477 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms