RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 ESR2Q92731 530 aa17.12■□□□□ 0.33
GCA-210ENST00000487445 BRF1Q92994 677 aa17.12■□□□□ 0.33
GCA-210ENST00000487445 LIMCH1Q9UPQ0 1083 aa17.12■□□□□ 0.33
GCA-210ENST00000487445 MMP14P50281 582 aa17.12■□□□□ 0.33
GCA-210ENST00000487445 ANTXR2P58335 489 aa17.12■□□□□ 0.33
GCA-210ENST00000487445 TOB2Q14106 344 aaPredicted RBP17.12■□□□□ 0.33
GCA-210ENST00000487445 SPDYE2Q495Y8 402 aa17.12■□□□□ 0.33
GCA-210ENST00000487445 SLC44A5Q8NCS7 719 aa17.12■□□□□ 0.33
GCA-210ENST00000487445 TMX3Q96JJ7 454 aa17.12■□□□□ 0.33
GCA-210ENST00000487445 GPHNQ9NQX3 736 aaPredicted RBP17.12■□□□□ 0.33
GCA-210ENST00000487445 FOXD4L1Q9NU39 408 aa17.12■□□□□ 0.33
GCA-210ENST00000487445 HLA-DOAP06340 250 aa17.11■□□□□ 0.33
GCA-210ENST00000487445 PCP11498 1178 aaKnown RBP17.11■□□□□ 0.33
GCA-210ENST00000487445 KIF4BQ2VIQ3 1234 aa17.11■□□□□ 0.33
GCA-210ENST00000487445 DPY19L2Q6NUT2 758 aa17.11■□□□□ 0.33
GCA-210ENST00000487445 ZKSCAN3Q9BRR0 538 aa17.11■□□□□ 0.33
GCA-210ENST00000487445 GPRC5DQ9NZD1 345 aa17.11■□□□□ 0.33
GCA-210ENST00000487445 DDTLA6NHG4 134 aaPredicted RBP17.1■□□□□ 0.33
GCA-210ENST00000487445 EPS15P42566 896 aa17.1■□□□□ 0.33
GCA-210ENST00000487445 FAM47AQ5JRC9 791 aa17.1■□□□□ 0.33
GCA-210ENST00000487445 ADAMTSL1Q8N6G6 1762 aa17.1■□□□□ 0.33
GCA-210ENST00000487445 ZBED3Q96IU2 234 aaPredicted RBP17.1■□□□□ 0.33
GCA-210ENST00000487445 ALDH8A1Q9H2A2 487 aaPredicted RBP17.1■□□□□ 0.33
GCA-210ENST00000487445 TPCN1Q9ULQ1 816 aa17.1■□□□□ 0.33
GCA-210ENST00000487445 NAP1L2Q9ULW6 460 aaPredicted RBP17.1■□□□□ 0.33
GCA-210ENST00000487445 SCAF8Q9UPN6 1271 aaKnown RBP17.1■□□□□ 0.33
GCA-210ENST00000487445 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
GCA-210ENST00000487445 ZNF646O15015 1829 aaPredicted RBP17.1■□□□□ 0.33
GCA-210ENST00000487445 IFIT3O14879 490 aaKnown RBP17.1■□□□□ 0.33
GCA-210ENST00000487445 ENTPD3O75355 529 aa17.1■□□□□ 0.33
GCA-210ENST00000487445 FGRP09769 529 aa17.1■□□□□ 0.33
GCA-210ENST00000487445 ZNF444Q8N0Y2 327 aaPredicted RBP17.1■□□□□ 0.33
GCA-210ENST00000487445 DHX36Q9H2U1 1008 aaKnown RBP17.1■□□□□ 0.33
GCA-210ENST00000487445 ZNF287Q9HBT7 754 aa17.1■□□□□ 0.33
GCA-210ENST00000487445 TSPY2A6NKD2 308 aa17.09■□□□□ 0.33
GCA-210ENST00000487445 ORC4O43929 436 aa17.09■□□□□ 0.33
GCA-210ENST00000487445 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
GCA-210ENST00000487445 LMOD1P29536 600 aaPredicted RBP17.09■□□□□ 0.33
GCA-210ENST00000487445 CDK8P49336 464 aa17.09■□□□□ 0.33
GCA-210ENST00000487445 APOBRQ0VD83 1088 aa17.09■□□□□ 0.33
GCA-210ENST00000487445 C16orf86Q6ZW13 317 aa17.09■□□□□ 0.33
GCA-210ENST00000487445 SH3BP5LQ7L8J4 393 aa17.09■□□□□ 0.33
GCA-210ENST00000487445 UBAC1Q9BSL1 405 aa17.09■□□□□ 0.33
GCA-210ENST00000487445 SERPINB13Q9UIV8 391 aa17.09■□□□□ 0.33
GCA-210ENST00000487445 ERICH2A1L162 156 aa17.08■□□□□ 0.33
GCA-210ENST00000487445 LARGE1O95461 756 aa17.08■□□□□ 0.33
GCA-210ENST00000487445 STK3Q13188 491 aa17.08■□□□□ 0.33
GCA-210ENST00000487445 SART3Q15020 963 aaKnown RBP17.08■□□□□ 0.33
GCA-210ENST00000487445 TMEM67Q5HYA8 995 aa17.08■□□□□ 0.33
GCA-210ENST00000487445 POTEDQ86YR6 584 aa17.08■□□□□ 0.33
GCA-210ENST00000487445 CRACR2BQ8N4Y2 399 aaPredicted RBP17.08■□□□□ 0.33
GCA-210ENST00000487445 PI4KBQ9UBF8 816 aa17.08■□□□□ 0.33
GCA-210ENST00000487445 ROBO3Q96MS0 1386 aa17.08■□□□□ 0.32
GCA-210ENST00000487445 ASTN2O75129 1339 aaPredicted RBP17.08■□□□□ 0.32
GCA-210ENST00000487445 SLURP2P0DP57 97 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 TFAP4Q01664 338 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 ME3Q16798 604 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 TRPM4Q8TD43 1214 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 TMEM87BQ96K49 555 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 ZSCAN31Q96LW9 406 aaPredicted RBP17.07■□□□□ 0.32
GCA-210ENST00000487445 CSRNP1Q96S65 589 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 TRIM34Q9BYJ4 488 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 WDR19Q8NEZ3 1342 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 NFXL1Q6ZNB6 911 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 IQCA1Q86XH1 822 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 IGDCC4Q8TDY8 1250 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 FAM151AQ8WW52 585 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 SLKQ9H2G2 1235 aaPredicted RBP17.07■□□□□ 0.32
GCA-210ENST00000487445 HACL1Q9UJ83 578 aa17.07■□□□□ 0.32
GCA-210ENST00000487445 ANGEL1Q9UNK9 670 aaKnown RBP17.07■□□□□ 0.32
GCA-210ENST00000487445 PSME4Q14997 1843 aa17.06■□□□□ 0.32
GCA-210ENST00000487445 FAM196BA6NMK8 535 aa17.06■□□□□ 0.32
GCA-210ENST00000487445 SH2B2O14492 632 aaPredicted RBP17.06■□□□□ 0.32
GCA-210ENST00000487445 TSPY3P0CV98 308 aa17.06■□□□□ 0.32
GCA-210ENST00000487445 TSPY8P0CW00 308 aa17.06■□□□□ 0.32
GCA-210ENST00000487445 RASA1P20936 1047 aa17.06■□□□□ 0.32
GCA-210ENST00000487445 NECAB1Q8N987 351 aa17.06■□□□□ 0.32
GCA-210ENST00000487445 AGXT2Q9BYV1 514 aa17.06■□□□□ 0.32
GCA-210ENST00000487445 TMEM39BQ9GZU3 492 aa17.06■□□□□ 0.32
GCA-210ENST00000487445 SENP2Q9HC62 589 aa17.06■□□□□ 0.32
GCA-210ENST00000487445 NMT2O60551 498 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 TNNI2P48788 182 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 GABPAQ06546 454 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 WTAPQ15007 396 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 FKBP1CQ5VVH2 108 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 CCDC83Q8IWF9 413 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 ZSCAN10Q96SZ4 725 aaPredicted RBP17.05■□□□□ 0.32
GCA-210ENST00000487445 SH2B1Q9NRF2 756 aaPredicted RBP17.05■□□□□ 0.32
GCA-210ENST00000487445 TNKSO95271 1327 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 KLF18A0A0U1RQI7 1052 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 TNFAIP1Q13829 316 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 RASA3Q14644 834 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 RAB11FIP4Q86YS3 637 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 FOXP4Q8IVH2 680 aaPredicted RBP17.05■□□□□ 0.32
GCA-210ENST00000487445 FBXL16Q8N461 479 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 EHD4Q9H223 541 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 LY9Q9HBG7 655 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 SWAP70Q9UH65 585 aa17.05■□□□□ 0.32
GCA-210ENST00000487445 CNTNAP1P78357 1384 aa17.04■□□□□ 0.32
GCA-210ENST00000487445 BAZ2AQ9UIF9 1905 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms