RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 GYG1P46976 350 aa17.09■□□□□ 0.33
TTC3-219ENST00000485402 UBASH3AP57075 661 aa17.09■□□□□ 0.33
TTC3-219ENST00000485402 NEK11Q8NG66 645 aa17.09■□□□□ 0.33
TTC3-219ENST00000485402 RXRAP19793 462 aa17.08■□□□□ 0.33
TTC3-219ENST00000485402 TM4SF1P30408 202 aa17.08■□□□□ 0.33
TTC3-219ENST00000485402 SF3B2Q13435 895 aaKnown RBP17.08■□□□□ 0.33
TTC3-219ENST00000485402 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.33
TTC3-219ENST00000485402 LLPHQ9BRT6 129 aaKnown RBP17.08■□□□□ 0.33
TTC3-219ENST00000485402 COL4A1P02462 1669 aa17.08■□□□□ 0.32
TTC3-219ENST00000485402 ADALQ6DHV7 355 aa17.08■□□□□ 0.32
TTC3-219ENST00000485402 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.32
TTC3-219ENST00000485402 UBR3Q6ZT12 1888 aa17.08■□□□□ 0.32
TTC3-219ENST00000485402 HMGB1P09429 215 aaKnown RBP17.08■□□□□ 0.32
TTC3-219ENST00000485402 PNMA6AP0CW24 399 aaPredicted RBP17.08■□□□□ 0.32
TTC3-219ENST00000485402 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.32
TTC3-219ENST00000485402 TEX35Q5T0J7 233 aa17.08■□□□□ 0.32
TTC3-219ENST00000485402 TMEM51Q9NW97 253 aa17.08■□□□□ 0.32
TTC3-219ENST00000485402 ARGLU1Q9NWB6 273 aaPredicted RBP17.08■□□□□ 0.32
TTC3-219ENST00000485402 DPF2Q92785 391 aa17.07■□□□□ 0.32
TTC3-219ENST00000485402 IRX5P78411 483 aaPredicted RBP17.07■□□□□ 0.32
TTC3-219ENST00000485402 LINC00301Q8NCQ3 95 aa17.07■□□□□ 0.32
TTC3-219ENST00000485402 ANKIB1Q9P2G1 1089 aa17.07■□□□□ 0.32
TTC3-219ENST00000485402 KLF18A0A0U1RQI7 1052 aa17.07■□□□□ 0.32
TTC3-219ENST00000485402 RNF113AO15541 343 aaKnown RBP17.07■□□□□ 0.32
TTC3-219ENST00000485402 HSPD1P10809 573 aaKnown RBP17.07■□□□□ 0.32
TTC3-219ENST00000485402 ETF1P62495 437 aaKnown RBP17.07■□□□□ 0.32
TTC3-219ENST00000485402 NLGN1Q8N2Q7 840 aa17.07■□□□□ 0.32
TTC3-219ENST00000485402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.07■□□□□ 0.32
TTC3-219ENST00000485402 SPEF2Q9C093 1822 aa17.06■□□□□ 0.32
TTC3-219ENST00000485402 GOLGA8BA8MQT2 603 aa17.06■□□□□ 0.32
TTC3-219ENST00000485402 POLRMTO00411 1230 aaKnown RBP17.06■□□□□ 0.32
TTC3-219ENST00000485402 UQCRFS1P1P0C7P4 283 aa17.06■□□□□ 0.32
TTC3-219ENST00000485402 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
TTC3-219ENST00000485402 RASGRF1Q13972 1273 aa17.06■□□□□ 0.32
TTC3-219ENST00000485402 OSBPL5Q9H0X9 879 aaPredicted RBP17.06■□□□□ 0.32
TTC3-219ENST00000485402 HNRNPH2P55795 449 aaKnown RBP17.06■□□□□ 0.32
TTC3-219ENST00000485402 FHOD1Q9Y613 1164 aa17.06■□□□□ 0.32
TTC3-219ENST00000485402 MMP10P09238 476 aa17.06■□□□□ 0.32
TTC3-219ENST00000485402 GYS2P54840 703 aa17.06■□□□□ 0.32
TTC3-219ENST00000485402 SPATA5Q8NB90 893 aa17.06■□□□□ 0.32
TTC3-219ENST00000485402 AIFM3Q96NN9 605 aa17.06■□□□□ 0.32
TTC3-219ENST00000485402 GNG11P61952 73 aa17.05■□□□□ 0.32
TTC3-219ENST00000485402 SPECC1Q5M775 1068 aa17.05■□□□□ 0.32
TTC3-219ENST00000485402 SLC9C2Q5TAH2 1124 aa17.05■□□□□ 0.32
TTC3-219ENST00000485402 CALCOCO1Q9P1Z2 691 aa17.05■□□□□ 0.32
TTC3-219ENST00000485402 IMPACTQ9P2X3 320 aa17.05■□□□□ 0.32
TTC3-219ENST00000485402 PIH1D3Q9NQM4 214 aaKnown RBP17.05■□□□□ 0.32
TTC3-219ENST00000485402 TMEM232C9JQI7 657 aa17.04■□□□□ 0.32
TTC3-219ENST00000485402 TOP1P11387 765 aaKnown RBP17.04■□□□□ 0.32
TTC3-219ENST00000485402 PFKFB1P16118 471 aa17.04■□□□□ 0.32
TTC3-219ENST00000485402 KLRK1P26718 216 aa17.04■□□□□ 0.32
TTC3-219ENST00000485402 PLA2G4AP47712 749 aa17.04■□□□□ 0.32
TTC3-219ENST00000485402 EVCP57679 992 aa17.04■□□□□ 0.32
TTC3-219ENST00000485402 PNOCQ13519 176 aa17.04■□□□□ 0.32
TTC3-219ENST00000485402 CAVIN4Q5BKX8 364 aa17.04■□□□□ 0.32
TTC3-219ENST00000485402 PNPLA7Q6ZV29 1317 aa17.04■□□□□ 0.32
TTC3-219ENST00000485402 OSBP2Q969R2 916 aa17.04■□□□□ 0.32
TTC3-219ENST00000485402 ABCF2Q9UG63 623 aa17.04■□□□□ 0.32
TTC3-219ENST00000485402 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
TTC3-219ENST00000485402 RTEL1Q9NZ71 1219 aa17.04■□□□□ 0.32
TTC3-219ENST00000485402 H2AFXP16104 143 aaPredicted RBP17.03■□□□□ 0.32
TTC3-219ENST00000485402 ATP2B1P20020 1258 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 ARID4AP29374 1257 aaPredicted RBP17.03■□□□□ 0.32
TTC3-219ENST00000485402 SYKP43405 635 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 NLRP12P59046 1061 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 GRAPQ13588 217 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 ZMYM1Q5SVZ6 1142 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 FLAD1Q8NFF5 587 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 GRAPLQ8TC17 118 aaPredicted RBP17.03■□□□□ 0.32
TTC3-219ENST00000485402 KCNG4Q8TDN1 519 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.03■□□□□ 0.325e-7■□□□□ 10.5
TTC3-219ENST00000485402 UBE4AQ14139 1066 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 MYSM1Q5VVJ2 828 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 CAMKK2Q96RR4 588 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 L2HGDHQ9H9P8 463 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 CLIC6Q96NY7 704 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 PARP3Q9Y6F1 533 aa17.03■□□□□ 0.32
TTC3-219ENST00000485402 PSDA5PKW4 1024 aaPredicted RBP17.02■□□□□ 0.32
TTC3-219ENST00000485402 M0R2C6 588 aa17.02■□□□□ 0.32
TTC3-219ENST00000485402 EXOSC10Q01780 885 aaKnown RBP17.02■□□□□ 0.32
TTC3-219ENST00000485402 KARSQ15046 597 aaKnown RBP17.02■□□□□ 0.32
TTC3-219ENST00000485402 PLCD3Q8N3E9 789 aa17.02■□□□□ 0.32
TTC3-219ENST00000485402 JAG2Q9Y219 1238 aa17.02■□□□□ 0.32
TTC3-219ENST00000485402 MAST3O60307 1309 aa17.02■□□□□ 0.32
TTC3-219ENST00000485402 KIF28PB7ZC32 967 aa17.02■□□□□ 0.32
TTC3-219ENST00000485402 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.32
TTC3-219ENST00000485402 SLC15A2Q16348 729 aa17.02■□□□□ 0.32
TTC3-219ENST00000485402 RALYLQ86SE5 291 aaKnown RBP17.02■□□□□ 0.32
TTC3-219ENST00000485402 GPR101Q96P66 508 aaPredicted RBP17.02■□□□□ 0.32
TTC3-219ENST00000485402 PUS7LQ9H0K6 701 aaKnown RBP17.02■□□□□ 0.32
TTC3-219ENST00000485402 HELLSQ9NRZ9 838 aa17.02■□□□□ 0.32
TTC3-219ENST00000485402 FANCLQ9NW38 375 aa17.02■□□□□ 0.32
TTC3-219ENST00000485402 LRP2BPQ9P2M1 347 aa17.02■□□□□ 0.32
TTC3-219ENST00000485402 PRC1O43663 620 aa17.02■□□□□ 0.31
TTC3-219ENST00000485402 ANO1Q5XXA6 986 aa17.02■□□□□ 0.31
TTC3-219ENST00000485402 ANKRD2Q9GZV1 360 aa17.02■□□□□ 0.31
TTC3-219ENST00000485402 GNL3LQ9NVN8 582 aaKnown RBP17.02■□□□□ 0.31
TTC3-219ENST00000485402 WWC3Q9ULE0 1092 aa17.02■□□□□ 0.31
TTC3-219ENST00000485402 ADKP55263 362 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms