RNA–Protein interactions for RNA: ENST00000483868.5

TPRA1-208, Transcript of transmembrane protein adipocyte associated 1, human

TSL 5

Gene TPRA1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRA1-208	ENST00000483868	DNAJC18	Q9H819	358 aa		32.89	■■■□□ 2.86
TPRA1-208	ENST00000483868	PI4KB	Q9UBF8	816 aa		32.89	■■■□□ 2.86
TPRA1-208	ENST00000483868	LAMB1	P07942	1786 aa		32.89	■■■□□ 2.86
TPRA1-208	ENST00000483868	ZNF213	O14771	459 aa		32.88	■■■□□ 2.85
TPRA1-208	ENST00000483868	MIGA2	Q7L4E1	593 aa		32.88	■■■□□ 2.85
TPRA1-208	ENST00000483868	PPP2R3B	Q9Y5P8	575 aa		32.88	■■■□□ 2.85
TPRA1-208	ENST00000483868	HSPA4	P34932	840 aa		32.88	■■■□□ 2.85
TPRA1-208	ENST00000483868	IMMT	Q16891	758 aa	Known RBP	32.88	■■■□□ 2.85
TPRA1-208	ENST00000483868	ANAPC4	Q9UJX5	808 aa		32.88	■■■□□ 2.85
TPRA1-208	ENST00000483868	FZD1	Q9UP38	647 aa		32.88	■■■□□ 2.85
TPRA1-208	ENST00000483868	SSC5D	A1L4H1	1573 aa		32.87	■■■□□ 2.85
TPRA1-208	ENST00000483868	HLA-DOA	P06340	250 aa		32.87	■■■□□ 2.85
TPRA1-208	ENST00000483868	GABPA	Q06546	454 aa		32.87	■■■□□ 2.85
TPRA1-208	ENST00000483868	CHADL	Q6NUI6	762 aa		32.87	■■■□□ 2.85
TPRA1-208	ENST00000483868	AMOTL1	Q8IY63	956 aa		32.87	■■■□□ 2.85
TPRA1-208	ENST00000483868	CDCA5	Q96FF9	252 aa		32.87	■■■□□ 2.85
TPRA1-208	ENST00000483868	LAMA4	Q16363	1823 aa		32.86	■■■□□ 2.85
TPRA1-208	ENST00000483868	EPB41L2	O43491	1005 aa	Known RBP	32.86	■■■□□ 2.85
TPRA1-208	ENST00000483868	SERPINB13	Q9UIV8	391 aa		32.86	■■■□□ 2.85
TPRA1-208	ENST00000483868	NKX2-3	Q8TAU0	364 aa		32.85	■■■□□ 2.85
TPRA1-208	ENST00000483868	ROBO3	Q96MS0	1386 aa		32.84	■■■□□ 2.85
TPRA1-208	ENST00000483868	STOX1	Q6ZVD7	989 aa		32.84	■■■□□ 2.85
TPRA1-208	ENST00000483868	METTL16	Q86W50	562 aa	Known RBP	32.84	■■■□□ 2.85
TPRA1-208	ENST00000483868	EHD4	Q9H223	541 aa		32.84	■■■□□ 2.85
TPRA1-208	ENST00000483868	PRDM1	O75626	825 aa		32.83	■■■□□ 2.85
TPRA1-208	ENST00000483868	ITGBL1	O95965	494 aa	Predicted RBP	32.83	■■■□□ 2.85
TPRA1-208	ENST00000483868	COL9A3	Q14050	684 aa	Predicted RBP	32.83	■■■□□ 2.85
TPRA1-208	ENST00000483868	EIF5B	O60841	1220 aa	Known RBP	32.82	■■■□□ 2.85
TPRA1-208	ENST00000483868	C16orf86	Q6ZW13	317 aa		32.82	■■■□□ 2.85
TPRA1-208	ENST00000483868	FOXP4	Q8IVH2	680 aa	Predicted RBP	32.82	■■■□□ 2.85
TPRA1-208	ENST00000483868	KCNB2	Q92953	911 aa		32.82	■■■□□ 2.85
TPRA1-208	ENST00000483868	CDK8	P49336	464 aa		32.82	■■■□□ 2.84
TPRA1-208	ENST00000483868	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	32.82	■■■□□ 2.84
TPRA1-208	ENST00000483868	SNX14	Q9Y5W7	946 aa		32.82	■■■□□ 2.84
TPRA1-208	ENST00000483868	MAP3K10	Q02779	954 aa		32.81	■■■□□ 2.84
TPRA1-208	ENST00000483868	PRKG1	Q13976	671 aa		32.81	■■■□□ 2.84
TPRA1-208	ENST00000483868	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	32.81	■■■□□ 2.84
TPRA1-208	ENST00000483868	SHMT1	P34896	483 aa		32.8	■■■□□ 2.84
TPRA1-208	ENST00000483868	RRP1B	Q14684	758 aa	Known RBP	32.8	■■■□□ 2.84
TPRA1-208	ENST00000483868	AKNAD1	Q5T1N1	836 aa		32.8	■■■□□ 2.84
TPRA1-208	ENST00000483868	NEDD4	P46934	1319 aa		32.8	■■■□□ 2.84
TPRA1-208	ENST00000483868		E7EWF7	191 aa		32.8	■■■□□ 2.84
TPRA1-208	ENST00000483868	ADCK5	Q3MIX3	580 aa		32.8	■■■□□ 2.84
TPRA1-208	ENST00000483868	SUPT20HL1	Q3ZLR7	823 aa		32.8	■■■□□ 2.84
TPRA1-208	ENST00000483868	STAG1	Q8WVM7	1258 aa		32.8	■■■□□ 2.84
TPRA1-208	ENST00000483868	C22orf23	Q9BZE7	217 aa		32.8	■■■□□ 2.84
TPRA1-208	ENST00000483868	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	32.8	■■■□□ 2.84
TPRA1-208	ENST00000483868	TBC1D12	O60347	775 aa		32.79	■■■□□ 2.84
TPRA1-208	ENST00000483868	RNF20	Q5VTR2	975 aa		32.79	■■■□□ 2.84
TPRA1-208	ENST00000483868	HERC5	Q9UII4	1024 aa	Known RBP	32.79	■■■□□ 2.84
TPRA1-208	ENST00000483868	FGR	P09769	529 aa		32.78	■■■□□ 2.84
TPRA1-208	ENST00000483868	SHROOM1	Q2M3G4	852 aa	Predicted RBP	32.78	■■■□□ 2.84
TPRA1-208	ENST00000483868	ZNF408	Q9H9D4	720 aa		32.78	■■■□□ 2.84
TPRA1-208	ENST00000483868	TOMM70	O94826	608 aa		32.77	■■■□□ 2.84
TPRA1-208	ENST00000483868	MFSD6	Q6ZSS7	791 aa		32.77	■■■□□ 2.84
TPRA1-208	ENST00000483868	SLC3A2	P08195	630 aa	Known RBP	32.77	■■■□□ 2.84
TPRA1-208	ENST00000483868	MCC	P23508	829 aa		32.77	■■■□□ 2.84
TPRA1-208	ENST00000483868	TSGA10IP	Q3SY00	556 aa		32.77	■■■□□ 2.84
TPRA1-208	ENST00000483868	TRIM34	Q9BYJ4	488 aa		32.77	■■■□□ 2.84
TPRA1-208	ENST00000483868	PHF20L1	A8MW92	1017 aa		32.76	■■■□□ 2.83
TPRA1-208	ENST00000483868	RRP12	Q5JTH9	1297 aa	Known RBP	32.76	■■■□□ 2.83
TPRA1-208	ENST00000483868	TATDN1	Q6P1N9	297 aa		32.76	■■■□□ 2.83
TPRA1-208	ENST00000483868	MOB2	Q70IA6	237 aa		32.76	■■■□□ 2.83
TPRA1-208	ENST00000483868	UPF2	Q9HAU5	1272 aa	Known RBP	32.76	■■■□□ 2.83
TPRA1-208	ENST00000483868	MKNK2	Q9HBH9	465 aa		32.76	■■■□□ 2.83
TPRA1-208	ENST00000483868	ZKSCAN1	P17029	563 aa	Predicted RBP	32.75	■■■□□ 2.83
TPRA1-208	ENST00000483868	RASA1	P20936	1047 aa		32.75	■■■□□ 2.83
TPRA1-208	ENST00000483868	PDE4B	Q07343	736 aa		32.75	■■■□□ 2.83
TPRA1-208	ENST00000483868	SMC1B	Q8NDV3	1235 aa		32.75	■■■□□ 2.83
TPRA1-208	ENST00000483868	TOMM22	Q9NS69	142 aa		32.75	■■■□□ 2.83
TPRA1-208	ENST00000483868	SWAP70	Q9UH65	585 aa		32.75	■■■□□ 2.83
TPRA1-208	ENST00000483868	USP2	O75604	605 aa	Predicted RBP	32.74	■■■□□ 2.83
TPRA1-208	ENST00000483868	JAG1	P78504	1218 aa		32.74	■■■□□ 2.83
TPRA1-208	ENST00000483868	RBM46	Q8TBY0	533 aa	Known RBP	32.74	■■■□□ 2.83
TPRA1-208	ENST00000483868	TBC1D32	Q96NH3	1257 aa		32.74	■■■□□ 2.83
TPRA1-208	ENST00000483868		B4E1Z4	1266 aa		32.74	■■■□□ 2.83
TPRA1-208	ENST00000483868	RBM25	P49756	843 aa	Known RBP	32.73	■■■□□ 2.83
TPRA1-208	ENST00000483868	FAM47A	Q5JRC9	791 aa		32.73	■■■□□ 2.83
TPRA1-208	ENST00000483868	DCAF15	Q66K64	600 aa		32.73	■■■□□ 2.83
TPRA1-208	ENST00000483868	RNF41	Q9H4P4	317 aa	Predicted RBP	32.73	■■■□□ 2.83
TPRA1-208	ENST00000483868	ORC4	O43929	436 aa		32.72	■■■□□ 2.83
TPRA1-208	ENST00000483868	CELF2	O95319	508 aa	Known RBP	32.72	■■■□□ 2.83
TPRA1-208	ENST00000483868	GDF11	O95390	407 aa		32.72	■■■□□ 2.83
TPRA1-208	ENST00000483868	CST9	Q5W186	159 aa		32.72	■■■□□ 2.83
TPRA1-208	ENST00000483868	HOOK2	Q96ED9	719 aa		32.72	■■■□□ 2.83
TPRA1-208	ENST00000483868	ZNF341	Q9BYN7	854 aa		32.72	■■■□□ 2.83
TPRA1-208	ENST00000483868	PASK	Q96RG2	1323 aa		32.72	■■■□□ 2.83
TPRA1-208	ENST00000483868	INPP5B	P32019	993 aa		32.71	■■■□□ 2.83
TPRA1-208	ENST00000483868	NF2	P35240	595 aa		32.71	■■■□□ 2.83
TPRA1-208	ENST00000483868	KLRG1	Q96E93	195 aa		32.71	■■■□□ 2.83
TPRA1-208	ENST00000483868	KIF2C	Q99661	725 aa		32.71	■■■□□ 2.83
TPRA1-208	ENST00000483868	MYH8	P13535	1937 aa		32.71	■■■□□ 2.83
TPRA1-208	ENST00000483868	RANBP6	O60518	1105 aa	Known RBP	32.71	■■■□□ 2.83
TPRA1-208	ENST00000483868	CPA1	P15085	419 aa		32.71	■■■□□ 2.83
TPRA1-208	ENST00000483868	AKR1B1	P15121	316 aa		32.71	■■■□□ 2.83
TPRA1-208	ENST00000483868	CERKL	Q49MI3	558 aa	Predicted RBP	32.71	■■■□□ 2.83
TPRA1-208	ENST00000483868	WRNIP1	Q96S55	665 aa		32.71	■■■□□ 2.83
TPRA1-208	ENST00000483868	JAKMIP1	Q96N16	626 aa	Known RBP	32.7	■■■□□ 2.83
TPRA1-208	ENST00000483868	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	32.7	■■■□□ 2.83
TPRA1-208	ENST00000483868	ZNF112	Q9UJU3	913 aa		32.7	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 200 ms