RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 WNT10AQ9GZT5 417 aa9.02□□□□□ -0.97
SF3B1-210ENST00000482158 FAM105AQ9NUU6 356 aa9.02□□□□□ -0.97
SF3B1-210ENST00000482158 ZNRF3Q9ULT6 936 aa9.02□□□□□ -0.97
SF3B1-210ENST00000482158 DNAJA2O60884 412 aa9.01□□□□□ -0.97
SF3B1-210ENST00000482158 GLB1P16278 677 aa9.01□□□□□ -0.97
SF3B1-210ENST00000482158 ATP2B1P20020 1258 aa9.01□□□□□ -0.97
SF3B1-210ENST00000482158 GRK4P32298 578 aa9.01□□□□□ -0.97
SF3B1-210ENST00000482158 TTLL4Q14679 1199 aa9.01□□□□□ -0.97
SF3B1-210ENST00000482158 DYMQ7RTS9 669 aa9.01□□□□□ -0.97
SF3B1-210ENST00000482158 UBE3DQ7Z6J8 389 aa9.01□□□□□ -0.97
SF3B1-210ENST00000482158 MEGF10Q96KG7 1140 aa9.01□□□□□ -0.97
SF3B1-210ENST00000482158 ATXN3LQ9H3M9 355 aa9.01□□□□□ -0.97
SF3B1-210ENST00000482158 FANCGO15287 622 aa9□□□□□ -0.97
SF3B1-210ENST00000482158 CD163Q86VB7 1156 aa9□□□□□ -0.97
SF3B1-210ENST00000482158 DZIP1LQ8IYY4 767 aaKnown RBP9□□□□□ -0.97
SF3B1-210ENST00000482158 SRRTQ9BXP5 876 aaKnown RBP9□□□□□ -0.97
SF3B1-210ENST00000482158 ANTXR1Q9H6X2 564 aa9□□□□□ -0.97
SF3B1-210ENST00000482158 REV1Q9UBZ9 1251 aa9□□□□□ -0.97
SF3B1-210ENST00000482158 PPP1R1BQ9UD71 204 aaPredicted RBP9□□□□□ -0.97
SF3B1-210ENST00000482158 STRIP2Q9ULQ0 834 aa9□□□□□ -0.97
SF3B1-210ENST00000482158 HCLS1P14317 486 aaPredicted RBP8.99□□□□□ -0.97
SF3B1-210ENST00000482158 ETFBP38117 255 aa8.99□□□□□ -0.97
SF3B1-210ENST00000482158 ASPAP45381 313 aa8.99□□□□□ -0.97
SF3B1-210ENST00000482158 GIPRP48546 466 aa8.99□□□□□ -0.97
SF3B1-210ENST00000482158 TMEM201Q5SNT2 666 aa8.99□□□□□ -0.97
SF3B1-210ENST00000482158 TXNRD3Q86VQ6 643 aa8.99□□□□□ -0.97
SF3B1-210ENST00000482158 RBBP8NLQ8NC74 664 aaPredicted RBP8.99□□□□□ -0.97
SF3B1-210ENST00000482158 ACSF2Q96CM8 615 aaPredicted RBP8.99□□□□□ -0.97
SF3B1-210ENST00000482158 SSBP4Q9BWG4 385 aaPredicted RBP8.99□□□□□ -0.97
SF3B1-210ENST00000482158 CEP41Q9BYV8 373 aa8.99□□□□□ -0.97
SF3B1-210ENST00000482158 FBRSQ9HAH7 460 aa8.99□□□□□ -0.97
SF3B1-210ENST00000482158 MRVI1Q9Y6F6 885 aa8.99□□□□□ -0.97
SF3B1-210ENST00000482158 C1QTNF9BB2RNN3 333 aa8.98□□□□□ -0.97
SF3B1-210ENST00000482158 RNF225M0QZC1 329 aaPredicted RBP8.98□□□□□ -0.97
SF3B1-210ENST00000482158 PLCG1P19174 1290 aa8.98□□□□□ -0.97
SF3B1-210ENST00000482158 GTF2F1P35269 517 aaKnown RBP eCLIP8.98□□□□□ -0.97
SF3B1-210ENST00000482158 CDPF1Q6NVV7 123 aa8.98□□□□□ -0.97
SF3B1-210ENST00000482158 ARMC10Q8N2F6 343 aa8.98□□□□□ -0.97
SF3B1-210ENST00000482158 UBXN4Q92575 508 aa8.98□□□□□ -0.97
SF3B1-210ENST00000482158 ISL2Q96A47 359 aa8.98□□□□□ -0.97
SF3B1-210ENST00000482158 ARMC5Q96C12 935 aa8.98□□□□□ -0.97
SF3B1-210ENST00000482158 FERD3LQ96RJ6 166 aa8.98□□□□□ -0.97
SF3B1-210ENST00000482158 ACSS3Q9H6R3 686 aa8.98□□□□□ -0.97
SF3B1-210ENST00000482158 ZNF408Q9H9D4 720 aa8.98□□□□□ -0.97
SF3B1-210ENST00000482158 TJP2Q9UDY2 1190 aa8.98□□□□□ -0.97
SF3B1-210ENST00000482158 ADAM30Q9UKF2 790 aa8.98□□□□□ -0.97
SF3B1-210ENST00000482158 SSBP05455 408 aaKnown RBP eCLIP8.97□□□□□ -0.97
SF3B1-210ENST00000482158 PGRP06401 933 aa8.97□□□□□ -0.97
SF3B1-210ENST00000482158 ETF1P62495 437 aaKnown RBP8.97□□□□□ -0.97
SF3B1-210ENST00000482158 RBL2Q08999 1139 aa8.97□□□□□ -0.97
SF3B1-210ENST00000482158 KCNMA1Q12791 1236 aa8.97□□□□□ -0.97
SF3B1-210ENST00000482158 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.97□□□□□ -0.97
SF3B1-210ENST00000482158 LSRQ86X29 649 aaPredicted RBP8.97□□□□□ -0.97
SF3B1-210ENST00000482158 FAM169BQ8N8A8 192 aa8.97□□□□□ -0.97
SF3B1-210ENST00000482158 SLC22A31A6NKX4 558 aa8.96□□□□□ -0.98
SF3B1-210ENST00000482158 MEIS3P2A8K0S8 358 aa8.96□□□□□ -0.98
SF3B1-210ENST00000482158 ITGB2P05107 769 aa8.96□□□□□ -0.98
SF3B1-210ENST00000482158 EIF6P56537 245 aaKnown RBP8.96□□□□□ -0.98
SF3B1-210ENST00000482158 PDE4BQ07343 736 aa8.96□□□□□ -0.98
SF3B1-210ENST00000482158 SLBPQ14493 270 aaKnown RBP eCLIP8.96□□□□□ -0.98
SF3B1-210ENST00000482158 NKG7Q16617 165 aa8.96□□□□□ -0.98
SF3B1-210ENST00000482158 ZNF507Q8TCN5 953 aa8.96□□□□□ -0.98
SF3B1-210ENST00000482158 CPLX3Q8WVH0 158 aa8.96□□□□□ -0.98
SF3B1-210ENST00000482158 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.95□□□□□ -0.98
SF3B1-210ENST00000482158 UPK3BL1B0FP48 263 aa8.95□□□□□ -0.98
SF3B1-210ENST00000482158 UPK3BL2E5RIL1 263 aa8.95□□□□□ -0.98
SF3B1-210ENST00000482158 SART1O43290 800 aaKnown RBP8.95□□□□□ -0.98
SF3B1-210ENST00000482158 IMPDH2P12268 514 aa8.95□□□□□ -0.98
SF3B1-210ENST00000482158 RASSF7Q02833 373 aa8.95□□□□□ -0.98
SF3B1-210ENST00000482158 SGO2Q562F6 1265 aa8.95□□□□□ -0.98
SF3B1-210ENST00000482158 FBXW10Q5XX13 1052 aa8.95□□□□□ -0.98
SF3B1-210ENST00000482158 MCATQ8IVS2 390 aaKnown RBP8.95□□□□□ -0.98
SF3B1-210ENST00000482158 SMYD4Q8IYR2 804 aaPredicted RBP8.95□□□□□ -0.98
SF3B1-210ENST00000482158 EZH1Q92800 747 aaPredicted RBP8.95□□□□□ -0.98
SF3B1-210ENST00000482158 ANAPC16Q96DE5 110 aa8.95□□□□□ -0.98
SF3B1-210ENST00000482158 MYRFLQ96LU7 910 aa8.95□□□□□ -0.98
SF3B1-210ENST00000482158 PICK1Q9NRD5 415 aa8.95□□□□□ -0.98
SF3B1-210ENST00000482158 CHURC1-FNTBB4DL54 471 aa8.94□□□□□ -0.98
SF3B1-210ENST00000482158 RNGTTO60942 597 aaKnown RBP8.94□□□□□ -0.98
SF3B1-210ENST00000482158 UVSSAQ2YD98 709 aa8.94□□□□□ -0.98
SF3B1-210ENST00000482158 OVOS1Q6IE37 1185 aa8.94□□□□□ -0.98
SF3B1-210ENST00000482158 RUFY4Q6ZNE9 571 aa8.94□□□□□ -0.98
SF3B1-210ENST00000482158 HID1Q8IV36 788 aa8.94□□□□□ -0.98
SF3B1-210ENST00000482158 MRPL41Q8IXM3 137 aaKnown RBP8.94□□□□□ -0.98
SF3B1-210ENST00000482158 FBLIM1Q8WUP2 373 aa8.94□□□□□ -0.98
SF3B1-210ENST00000482158 TMEM40Q8WWA1 233 aa8.94□□□□□ -0.98
SF3B1-210ENST00000482158 SEMA6CQ9H3T2 930 aa8.94□□□□□ -0.98
SF3B1-210ENST00000482158 PIDD1Q9HB75 910 aa8.94□□□□□ -0.98
SF3B1-210ENST00000482158 GMIPQ9P107 970 aa8.94□□□□□ -0.98
SF3B1-210ENST00000482158 GAS2O43903 313 aaKnown RBP8.93□□□□□ -0.98
SF3B1-210ENST00000482158 RAB6AP20340 208 aa8.93□□□□□ -0.98
SF3B1-210ENST00000482158 CAP2P40123 477 aa8.93□□□□□ -0.98
SF3B1-210ENST00000482158 FAM20CQ8IXL6 584 aa8.93□□□□□ -0.98
SF3B1-210ENST00000482158 ATG4CQ96DT6 458 aa8.93□□□□□ -0.98
SF3B1-210ENST00000482158 TMEM87BQ96K49 555 aa8.93□□□□□ -0.98
SF3B1-210ENST00000482158 DNAJC2Q99543 621 aaKnown RBP8.93□□□□□ -0.98
SF3B1-210ENST00000482158 DYNC1LI2O43237 492 aaPredicted RBP8.92□□□□□ -0.98
SF3B1-210ENST00000482158 STK10O94804 968 aaKnown RBP8.92□□□□□ -0.98
SF3B1-210ENST00000482158 NFICP08651 508 aa8.92□□□□□ -0.98
SF3B1-210ENST00000482158 ACRP10323 421 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms