RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	EIF3CL	B5ME19	914 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	C19orf81	C9J6K1	198 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835		M0QX08	132 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	LIN7A	O14910	233 aa	Predicted RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	CHUK	O15111	745 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	SART1	O43290	800 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	TCEA3	O75764	348 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	BAIAP3	O94812	1187 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	FGFR1OP	O95684	399 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	S100B	P04271	92 aa	Predicted RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	TROVE2	P10155	538 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	BCR	P11274	1271 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	BTF3	P20290	206 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	VAMP1	P23763	118 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	HSPA1L	P34931	641 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	ZNF76	P36508	570 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	USP5	P45974	858 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	TRAPPC10	P48553	1259 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	CTCF	P49711	727 aa	Predicted RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	RRP1	P56182	461 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	BASP1	P80723	227 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	PPID	Q08752	370 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	MRPL28	Q13084	256 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	PDE3B	Q13370	1112 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	CUL4B	Q13620	913 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	SMC1A	Q14683	1233 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	TRIM71	Q2Q1W2	868 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	CCDC57	Q2TAC2	916 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	WLS	Q5T9L3	541 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	THOC7	Q6I9Y2	204 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	KANK3	Q6NY19	840 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	GIGYF2	Q6Y7W6	1299 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	RUFY3	Q7L099	469 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	PPFIBP1	Q86W92	1011 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	SLC7A5P1	Q8MH63	180 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	DCLK2	Q8N568	766 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	PPP1R14C	Q8TAE6	165 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	KIAA1524	Q8TCG1	905 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	PARD3B	Q8TEW8	1205 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	APPBP2	Q92624	585 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	ZNF75CP	Q92670	426 aa	Predicted RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	CDKL2	Q92772	493 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	TBC1D20	Q96BZ9	403 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	GCC1	Q96CN9	775 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	CFAP36	Q96G28	342 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	EIF3C	Q99613	913 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	HAUS7	Q99871	368 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	SRRT	Q9BXP5	876 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	PHACTR1	Q9C0D0	580 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	LGR6	Q9HBX8	967 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	KMT5A	Q9NQR1	393 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	DISC1	Q9NRI5	854 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	AIPL1	Q9NZN9	384 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	KIAA1468	Q9P260	1216 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	TFIP11	Q9UBB9	837 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	EPS15L1	Q9UBC2	864 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	TPCN1	Q9ULQ1	816 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	PAIP2B	Q9ULR5	123 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	PRELID1	Q9Y255	219 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	TBX22	Q9Y458	520 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	COL4A3BP	Q9Y5P4	624 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	PPP2R3B	Q9Y5P8	575 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	SCAF11	Q99590	1463 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	CCDC162P	A2VCL2	907 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835		A6NJY4	79 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	TTC34	A8MYJ7	566 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	STXBP3	O00186	592 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	TBX3	O15119	743 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	SLC26A4	O43511	780 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	AKR1B10	O60218	316 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	KPNA6	O60684	536 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	ERLIN2	O94905	339 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	FER	P16591	822 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	ATF7	P17544	494 aa	Predicted RBP	4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	KCNA6	P17658	529 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	OAS2	P29728	719 aa	Known RBP	4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	ACTN2	P35609	894 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	CCT6A	P40227	531 aa	Known RBP	4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	RANBP1	P43487	201 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	PLA2G4A	P47712	749 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	NLRP12	P59046	1061 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	DYNC1I2	Q13409	638 aa	Known RBP	4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	SEPT6	Q14141	434 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	MAP7	Q14244	749 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	C10orf76	Q5T2E6	689 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	SPATA1	Q5VX52	437 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	KAZN	Q674X7	775 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	CWF19L1	Q69YN2	538 aa	Known RBP	4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	SLC30A9	Q6PML9	568 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	MTHFD1L	Q6UB35	978 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	IQCA1	Q86XH1	822 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	LSMEM2	Q8N112	164 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	LILRB2	Q8N423	598 aa		4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	PDCD7	Q8N8D1	485 aa	Known RBP	4.34	□□□□□ -1.71
LSM2-211	ENST00000475835	PRPF38A	Q8NAV1	312 aa	Known RBP	4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms