RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 SEC24BO95487 1268 aa18.01■□□□□ 0.47
MCF2L-224ENST00000475524 FGRP09769 529 aa18.01■□□□□ 0.47
MCF2L-224ENST00000475524 ZKSCAN1P17029 563 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-224ENST00000475524 CREB3L3Q68CJ9 461 aa18.01■□□□□ 0.47
MCF2L-224ENST00000475524 SAP30BPQ9UHR5 308 aaKnown RBP18.01■□□□□ 0.47
MCF2L-224ENST00000475524 TRPM7Q96QT4 1865 aa18.01■□□□□ 0.47
MCF2L-224ENST00000475524 SLC27A2O14975 620 aa18■□□□□ 0.47
MCF2L-224ENST00000475524 CYP21A2P08686 494 aa18■□□□□ 0.47
MCF2L-224ENST00000475524 PLCD1P51178 756 aa18■□□□□ 0.47
MCF2L-224ENST00000475524 PDE4BQ07343 736 aa18■□□□□ 0.47
MCF2L-224ENST00000475524 KRT32Q14532 448 aa18■□□□□ 0.47
MCF2L-224ENST00000475524 DCAF15Q66K64 600 aa18■□□□□ 0.47
MCF2L-224ENST00000475524 C16orf86Q6ZW13 317 aa18■□□□□ 0.47
MCF2L-224ENST00000475524 STAG1Q8WVM7 1258 aa18■□□□□ 0.47
MCF2L-224ENST00000475524 MINDY4BA8MYZ0 360 aa17.99■□□□□ 0.47
MCF2L-224ENST00000475524 POTEIP0CG38 1075 aa17.99■□□□□ 0.47
MCF2L-224ENST00000475524 POTEJP0CG39 1038 aa17.99■□□□□ 0.47
MCF2L-224ENST00000475524 NF2P35240 595 aa17.99■□□□□ 0.47
MCF2L-224ENST00000475524 RBM25P49756 843 aaKnown RBP17.99■□□□□ 0.47
MCF2L-224ENST00000475524 AKNAD1Q5T1N1 836 aa17.99■□□□□ 0.47
MCF2L-224ENST00000475524 ZNF784Q8NCA9 323 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-224ENST00000475524 IL27Q8NEV9 243 aa17.99■□□□□ 0.47
MCF2L-224ENST00000475524 RBM46Q8TBY0 533 aaKnown RBP17.99■□□□□ 0.47
MCF2L-224ENST00000475524 CNNM2Q9H8M5 875 aa17.99■□□□□ 0.47
MCF2L-224ENST00000475524 PAPPA2Q9BXP8 1791 aa17.99■□□□□ 0.47
MCF2L-224ENST00000475524 ORC4O43929 436 aa17.98■□□□□ 0.47
MCF2L-224ENST00000475524 TOMM70O94826 608 aa17.98■□□□□ 0.47
MCF2L-224ENST00000475524 CRACR2BQ8N4Y2 399 aaPredicted RBP17.98■□□□□ 0.47
MCF2L-224ENST00000475524 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.98■□□□□ 0.47
MCF2L-224ENST00000475524 SSC5DA1L4H1 1573 aa17.98■□□□□ 0.47
MCF2L-224ENST00000475524 ADM5C9JUS6 153 aa17.97■□□□□ 0.47
MCF2L-224ENST00000475524 CYP2D6P10635 497 aa17.97■□□□□ 0.47
MCF2L-224ENST00000475524 MAP1SQ66K74 1059 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-224ENST00000475524 TATDN1Q6P1N9 297 aa17.97■□□□□ 0.47
MCF2L-224ENST00000475524 MFSD6Q6ZSS7 791 aa17.97■□□□□ 0.47
MCF2L-224ENST00000475524 USP48Q86UV5 1035 aa17.97■□□□□ 0.47
MCF2L-224ENST00000475524 SMC1BQ8NDV3 1235 aa17.97■□□□□ 0.47
MCF2L-224ENST00000475524 CDCA5Q96FF9 252 aa17.97■□□□□ 0.47
MCF2L-224ENST00000475524 CCDC17Q96LX7 622 aa17.97■□□□□ 0.47
MCF2L-224ENST00000475524 TRIM34Q9BYJ4 488 aa17.97■□□□□ 0.47
MCF2L-224ENST00000475524 GLIS2Q9BZE0 524 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-224ENST00000475524 NBPF3Q9H094 633 aa17.97■□□□□ 0.47
MCF2L-224ENST00000475524 GINM1Q9NU53 330 aa17.97■□□□□ 0.47
MCF2L-224ENST00000475524 GREB1LQ9C091 1923 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-224ENST00000475524 CYP2D7A0A087X1C5 515 aa17.96■□□□□ 0.47
MCF2L-224ENST00000475524 UNCXA6NJT0 531 aa17.96■□□□□ 0.47
MCF2L-224ENST00000475524 HAND2P61296 217 aa17.96■□□□□ 0.47
MCF2L-224ENST00000475524 NBPF12Q5TAG4 269 aaPredicted RBP17.96■□□□□ 0.47
MCF2L-224ENST00000475524 TBC1D10CQ8IV04 446 aa17.96■□□□□ 0.47
MCF2L-224ENST00000475524 C22orf23Q9BZE7 217 aa17.96■□□□□ 0.47
MCF2L-224ENST00000475524 KRT23Q9C075 422 aa17.96■□□□□ 0.47
MCF2L-224ENST00000475524 ATAD5Q96QE3 1844 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 DOCK1Q14185 1865 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 PLIN4Q96Q06 1357 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 ITGBL1O95965 494 aaPredicted RBP17.95■□□□□ 0.46
MCF2L-224ENST00000475524 HMGB1P09429 215 aaKnown RBP17.95■□□□□ 0.46
MCF2L-224ENST00000475524 CDK8P49336 464 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 FKBP1BP68106 108 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 CTDSPL2Q05D32 466 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 FSTL1Q12841 308 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 TRDNQ13061 729 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 MAP3K11Q16584 847 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 TBC1D32Q96NH3 1257 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 MTA3Q9BTC8 594 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 ZNF341Q9BYN7 854 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 TM6SF1Q9BZW5 370 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 DNAJC18Q9H819 358 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.95■□□□□ 0.46
MCF2L-224ENST00000475524 ZNF112Q9UJU3 913 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 SNX14Q9Y5W7 946 aa17.95■□□□□ 0.46
MCF2L-224ENST00000475524 E7EWF7 191 aa17.94■□□□□ 0.46
MCF2L-224ENST00000475524 PPP1R12BO60237 982 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-224ENST00000475524 PSMA5P28066 241 aa17.94■□□□□ 0.46
MCF2L-224ENST00000475524 SHMT1P34896 483 aa17.94■□□□□ 0.46
MCF2L-224ENST00000475524 CDAN1Q8IWY9 1227 aa17.94■□□□□ 0.46
MCF2L-224ENST00000475524 NCOA7Q8NI08 942 aa17.94■□□□□ 0.46
MCF2L-224ENST00000475524 WDR19Q8NEZ3 1342 aa17.94■□□□□ 0.46
MCF2L-224ENST00000475524 OTOFQ9HC10 1997 aa17.93■□□□□ 0.46
MCF2L-224ENST00000475524 RASA1P20936 1047 aa17.93■□□□□ 0.46
MCF2L-224ENST00000475524 RALYLQ86SE5 291 aaKnown RBP17.93■□□□□ 0.46
MCF2L-224ENST00000475524 RASEFQ8IZ41 740 aa17.93■□□□□ 0.46
MCF2L-224ENST00000475524 ESR2Q92731 530 aa17.93■□□□□ 0.46
MCF2L-224ENST00000475524 DYNLL2Q96FJ2 89 aa17.93■□□□□ 0.46
MCF2L-224ENST00000475524 MKNK2Q9HBH9 465 aa17.93■□□□□ 0.46
MCF2L-224ENST00000475524 SCAF8Q9UPN6 1271 aaKnown RBP17.93■□□□□ 0.46
MCF2L-224ENST00000475524 PHF20L1A8MW92 1017 aa17.92■□□□□ 0.46
MCF2L-224ENST00000475524 SLC4A8Q2Y0W8 1093 aa17.92■□□□□ 0.46
MCF2L-224ENST00000475524 PPP4R3BQ5MIZ7 849 aa17.92■□□□□ 0.46
MCF2L-224ENST00000475524 ZNF444Q8N0Y2 327 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-224ENST00000475524 KLRG1Q96E93 195 aa17.92■□□□□ 0.46
MCF2L-224ENST00000475524 NEDD4P46934 1319 aa17.92■□□□□ 0.46
MCF2L-224ENST00000475524 PASKQ96RG2 1323 aa17.92■□□□□ 0.46
MCF2L-224ENST00000475524 SMIM22K7EJ46 135 aa17.91■□□□□ 0.46
MCF2L-224ENST00000475524 CTNND1O60716 968 aaKnown RBP17.91■□□□□ 0.46
MCF2L-224ENST00000475524 IREB2P48200 963 aaKnown RBP17.91■□□□□ 0.46
MCF2L-224ENST00000475524 EVX2Q03828 476 aa17.91■□□□□ 0.46
MCF2L-224ENST00000475524 CERKLQ49MI3 558 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-224ENST00000475524 CCDC178Q5BJE1 867 aa17.91■□□□□ 0.46
MCF2L-224ENST00000475524 NOL9Q5SY16 702 aaKnown RBP17.91■□□□□ 0.46
MCF2L-224ENST00000475524 STOX1Q6ZVD7 989 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms