RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 SEZ6L2Q6UXD5 910 aa9.25□□□□□ -0.93
SSB-209ENST00000470621 CYFIP1Q7L576 1253 aa9.25□□□□□ -0.93
SSB-209ENST00000470621 METTL16Q86W50 562 aaKnown RBP9.25□□□□□ -0.93
SSB-209ENST00000470621 FBXO27Q8NI29 283 aa9.25□□□□□ -0.93
SSB-209ENST00000470621 RNF34Q969K3 372 aa9.25□□□□□ -0.93
SSB-209ENST00000470621 RNF112Q9ULX5 631 aa9.25□□□□□ -0.93
SSB-209ENST00000470621 IGLV1-40P01703 118 aa9.24□□□□□ -0.93
SSB-209ENST00000470621 ADMP35318 185 aa9.24□□□□□ -0.93
SSB-209ENST00000470621 EIF4A3P38919 411 aaKnown RBP9.24□□□□□ -0.93
SSB-209ENST00000470621 RNF43Q68DV7 783 aa9.24□□□□□ -0.93
SSB-209ENST00000470621 HDXQ7Z353 690 aa9.24□□□□□ -0.93
SSB-209ENST00000470621 GATAD2BQ8WXI9 593 aa9.24□□□□□ -0.93
SSB-209ENST00000470621 PICK1Q9NRD5 415 aa9.24□□□□□ -0.93
SSB-209ENST00000470621 C1GALT1Q9NS00 363 aa9.24□□□□□ -0.93
SSB-209ENST00000470621 PRKAG2Q9UGJ0 569 aa9.24□□□□□ -0.93
SSB-209ENST00000470621 CILPO75339 1184 aa9.23□□□□□ -0.93
SSB-209ENST00000470621 RACK1P63244 317 aaKnown RBP9.23□□□□□ -0.93
SSB-209ENST00000470621 RPL6Q02878 288 aaKnown RBP9.23□□□□□ -0.93
SSB-209ENST00000470621 MAP7Q14244 749 aa9.23□□□□□ -0.93
SSB-209ENST00000470621 PAOXQ6QHF9 649 aa9.23□□□□□ -0.93
SSB-209ENST00000470621 USP48Q86UV5 1035 aa9.23□□□□□ -0.93
SSB-209ENST00000470621 FBXL6Q8N531 539 aa9.23□□□□□ -0.93
SSB-209ENST00000470621 GATA6Q92908 595 aa9.23□□□□□ -0.93
SSB-209ENST00000470621 FBRSQ9HAH7 460 aa9.23□□□□□ -0.93
SSB-209ENST00000470621 SNCAIPQ9Y6H5 919 aa9.23□□□□□ -0.93
SSB-209ENST00000470621 CDK5R2Q13319 367 aa9.22□□□□□ -0.93
SSB-209ENST00000470621 CCDC84Q86UT8 332 aaPredicted RBP9.22□□□□□ -0.93
SSB-209ENST00000470621 DBNDD2Q9BQY9 259 aa9.22□□□□□ -0.93
SSB-209ENST00000470621 KCNQ5Q9NR82 932 aa9.22□□□□□ -0.93
SSB-209ENST00000470621 FANCGO15287 622 aa9.21□□□□□ -0.94
SSB-209ENST00000470621 TLR3O15455 904 aaKnown RBP9.21□□□□□ -0.94
SSB-209ENST00000470621 F13BP05160 661 aa9.21□□□□□ -0.94
SSB-209ENST00000470621 GRK4P32298 578 aa9.21□□□□□ -0.94
SSB-209ENST00000470621 CRKP46108 304 aa9.21□□□□□ -0.94
SSB-209ENST00000470621 SHKBP1Q8TBC3 707 aa9.21□□□□□ -0.94
SSB-209ENST00000470621 ZNF296Q8WUU4 475 aaPredicted RBP9.21□□□□□ -0.94
SSB-209ENST00000470621 TBC1D32Q96NH3 1257 aa9.21□□□□□ -0.94
SSB-209ENST00000470621 SSU72Q9NP77 194 aaKnown RBP9.21□□□□□ -0.94
SSB-209ENST00000470621 CORINQ9Y5Q5 1042 aa9.21□□□□□ -0.94
SSB-209ENST00000470621 NKG7Q16617 165 aa9.2□□□□□ -0.94
SSB-209ENST00000470621 FAM196AQ6ZSG2 479 aa9.2□□□□□ -0.94
SSB-209ENST00000470621 ZAR1Q86SH2 424 aa9.2□□□□□ -0.94
SSB-209ENST00000470621 ZDHHC13Q8IUH4 622 aa9.2□□□□□ -0.94
SSB-209ENST00000470621 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.2□□□□□ -0.94
SSB-209ENST00000470621 WNT10AQ9GZT5 417 aa9.2□□□□□ -0.94
SSB-209ENST00000470621 PCOLCE2Q9UKZ9 415 aa9.2□□□□□ -0.94
SSB-209ENST00000470621 SUPT16HQ9Y5B9 1047 aaKnown RBP9.2□□□□□ -0.94
SSB-209ENST00000470621 FAM170BA6NMN3 283 aa9.19□□□□□ -0.94
SSB-209ENST00000470621 GREM1O60565 184 aa9.19□□□□□ -0.94
SSB-209ENST00000470621 ETF1P62495 437 aaKnown RBP9.19□□□□□ -0.94
SSB-209ENST00000470621 NT5DC4Q86YG4 428 aa9.19□□□□□ -0.94
SSB-209ENST00000470621 UBP1Q9NZI7 540 aa9.19□□□□□ -0.94
SSB-209ENST00000470621 DDX41Q9UJV9 622 aaKnown RBP9.19□□□□□ -0.94
SSB-209ENST00000470621 POLR3KQ9Y2Y1 108 aaPredicted RBP9.19□□□□□ -0.94
SSB-209ENST00000470621 WDR64B1ANS9 1081 aa9.18□□□□□ -0.94
SSB-209ENST00000470621 GRIN3BO60391 1043 aa9.18□□□□□ -0.94
SSB-209ENST00000470621 BPNT1O95861 308 aa9.18□□□□□ -0.94
SSB-209ENST00000470621 MPP2Q14168 576 aa9.18□□□□□ -0.94
SSB-209ENST00000470621 KRTAP19-1Q8IUB9 90 aa9.18□□□□□ -0.94
SSB-209ENST00000470621 GSC2O15499 205 aa9.17□□□□□ -0.94
SSB-209ENST00000470621 TGFB1P01137 390 aa9.17□□□□□ -0.94
SSB-209ENST00000470621 REC114Q7Z4M0 266 aa9.17□□□□□ -0.94
SSB-209ENST00000470621 SLC51AQ86UW1 340 aa9.17□□□□□ -0.94
SSB-209ENST00000470621 EAF1Q96JC9 268 aaPredicted RBP9.17□□□□□ -0.94
SSB-209ENST00000470621 SPON2Q9BUD6 331 aa9.17□□□□□ -0.94
SSB-209ENST00000470621 RBAK-RBAKDNI3L0D1 243 aa9.16□□□□□ -0.94
SSB-209ENST00000470621 LEFTY1O75610 366 aa9.16□□□□□ -0.94
SSB-209ENST00000470621 PGRP06401 933 aa9.16□□□□□ -0.94
SSB-209ENST00000470621 RAD51AP2Q09MP3 1159 aa9.16□□□□□ -0.94
SSB-209ENST00000470621 SLBPQ14493 270 aaKnown RBP eCLIP9.16□□□□□ -0.94
SSB-209ENST00000470621 MCTP1Q6DN14 999 aa9.16□□□□□ -0.94
SSB-209ENST00000470621 ZNF765Q7L2R6 523 aa9.16□□□□□ -0.94
SSB-209ENST00000470621 KIAA0825Q8IV33 1275 aa9.16□□□□□ -0.94
SSB-209ENST00000470621 ZNF507Q8TCN5 953 aa9.16□□□□□ -0.94
SSB-209ENST00000470621 GOLGA2P5Q9HBQ8 144 aa9.16□□□□□ -0.94
SSB-209ENST00000470621 PRR19A6NJB7 356 aa9.15□□□□□ -0.94
SSB-209ENST00000470621 FAM87AP0C7U9 286 aa9.15□□□□□ -0.94
SSB-209ENST00000470621 CDC37L1Q7L3B6 337 aa9.15□□□□□ -0.94
SSB-209ENST00000470621 ACSF2Q96CM8 615 aaPredicted RBP9.15□□□□□ -0.94
SSB-209ENST00000470621 DPH2Q9BQC3 489 aaPredicted RBP9.15□□□□□ -0.94
SSB-209ENST00000470621 LRRC3Q9BY71 257 aa9.15□□□□□ -0.94
SSB-209ENST00000470621 BRMS1Q9HCU9 246 aa9.15□□□□□ -0.94
SSB-209ENST00000470621 TJP2Q9UDY2 1190 aa9.15□□□□□ -0.94
SSB-209ENST00000470621 TCF3P15923 654 aa9.14□□□□□ -0.95
SSB-209ENST00000470621 ARMCX6Q7L4S7 300 aa9.14□□□□□ -0.95
SSB-209ENST00000470621 TOP6BLQ8N6T0 577 aa9.14□□□□□ -0.95
SSB-209ENST00000470621 TACC3Q9Y6A5 838 aa9.14□□□□□ -0.95
SSB-209ENST00000470621 BTBD11A6QL63 1104 aa9.13□□□□□ -0.95
SSB-209ENST00000470621 DNAJA2O60884 412 aa9.13□□□□□ -0.95
SSB-209ENST00000470621 PLCG1P19174 1290 aa9.13□□□□□ -0.95
SSB-209ENST00000470621 SEZ6Q53EL9 994 aa9.13□□□□□ -0.95
SSB-209ENST00000470621 HID1Q8IV36 788 aa9.13□□□□□ -0.95
SSB-209ENST00000470621 DUSP23Q9BVJ7 150 aa9.13□□□□□ -0.95
SSB-209ENST00000470621 PCMTD2Q9NV79 361 aa9.13□□□□□ -0.95
SSB-209ENST00000470621 HOXA10P31260 410 aaPredicted RBP9.12□□□□□ -0.95
SSB-209ENST00000470621 APOBRQ0VD83 1088 aa9.12□□□□□ -0.95
SSB-209ENST00000470621 CWF19L2Q2TBE0 894 aaKnown RBP9.12□□□□□ -0.95
SSB-209ENST00000470621 PRAMEF13Q5VWM6 474 aa9.12□□□□□ -0.95
SSB-209ENST00000470621 ZNF654Q8IZM8 581 aa9.12□□□□□ -0.95
SSB-209ENST00000470621 KCT2Q8NC54 265 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms