RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 CYP2D7A0A087X1C5 515 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 PTPDC1A2A3K4 754 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 CCDC69A6NI79 296 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 CTDNEP1O95476 244 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 USP17L8P0C7I0 530 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 RRP12Q5JTH9 1297 aaKnown RBP11.07□□□□□ -0.64
PRPF3-202ENST00000467329 SYNE3Q6ZMZ3 975 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 IQCA1Q86XH1 822 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 NKX2-3Q8TAU0 364 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 ZSCAN10Q96SZ4 725 aaPredicted RBP11.07□□□□□ -0.64
PRPF3-202ENST00000467329 INCENPQ9NQS7 918 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 TOMM22Q9NS69 142 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 TCP11L1Q9NUJ3 509 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 YDJCA8MPS7 323 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 ZBTB43O43298 467 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 CYP2D6P10635 497 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 IARSP41252 1262 aaKnown RBP11.06□□□□□ -0.64
PRPF3-202ENST00000467329 LARP1BQ659C4 914 aaKnown RBP11.06□□□□□ -0.64
PRPF3-202ENST00000467329 CPLX2Q6PUV4 134 aaKnown RBP11.06□□□□□ -0.64
PRPF3-202ENST00000467329 NFXL1Q6ZNB6 911 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 C16orf86Q6ZW13 317 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 LARGE2Q8N3Y3 721 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 ANKS1AQ92625 1134 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 STK36Q9NRP7 1315 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 ADAMTSL1Q8N6G6 1762 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 F13A1P00488 732 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 POLR3DP05423 398 aaPredicted RBP11.06□□□□□ -0.64
PRPF3-202ENST00000467329 VIL1P09327 827 aaKnown RBP11.06□□□□□ -0.64
PRPF3-202ENST00000467329 METAP2P50579 478 aaKnown RBP eCLIP11.06□□□□□ -0.64
PRPF3-202ENST00000467329 APOBEC3HQ6NTF7 200 aaKnown RBP11.06□□□□□ -0.64
PRPF3-202ENST00000467329 RSBN1LQ6PCB5 846 aaPredicted RBP11.06□□□□□ -0.64
PRPF3-202ENST00000467329 MAPKAPK5Q8IW41 473 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 NIM1KQ8IY84 436 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 ZNRF3Q9ULT6 936 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 SLC12A7Q9Y666 1083 aa11.06□□□□□ -0.64
PRPF3-202ENST00000467329 COL4A5P29400 1685 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 JAK2O60674 1132 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 DDAH1O94760 285 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 CALM1P0DP23 149 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 CALM2P0DP24 149 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 CALM3P0DP25 149 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 CDC42EP5Q6NZY7 148 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 TTC6Q86TZ1 520 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 FAM184AQ8NB25 1140 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 MXD3Q9BW11 206 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 TAOK3Q9H2K8 898 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 USP40Q9NVE5 1235 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 TNKSO95271 1327 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 PLIN4Q96Q06 1357 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 CCDC196A0A1B0GTZ2 297 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 GOLGA8AA7E2F4 631 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 WDHD1O75717 1129 aaPredicted RBP11.05□□□□□ -0.64
PRPF3-202ENST00000467329 CCT2P78371 535 aaKnown RBP11.05□□□□□ -0.64
PRPF3-202ENST00000467329 SKOR2Q2VWA4 1001 aaPredicted RBP11.05□□□□□ -0.64
PRPF3-202ENST00000467329 GMLQ99445 158 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 IDI2Q9BXS1 227 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 KCNQ5Q9NR82 932 aa11.05□□□□□ -0.64
PRPF3-202ENST00000467329 NAP1L2Q9ULW6 460 aaPredicted RBP11.05□□□□□ -0.64
PRPF3-202ENST00000467329 F8W031 263 aaPredicted RBP11.04□□□□□ -0.64
PRPF3-202ENST00000467329 CPLX1O14810 134 aa11.04□□□□□ -0.64
PRPF3-202ENST00000467329 RANBP6O60518 1105 aaKnown RBP11.04□□□□□ -0.64
PRPF3-202ENST00000467329 ENAHQ8N8S7 591 aaPredicted RBP11.04□□□□□ -0.64
PRPF3-202ENST00000467329 AGBL3Q8NEM8 1001 aa11.04□□□□□ -0.64
PRPF3-202ENST00000467329 NCOA5Q9HCD5 579 aaKnown RBP11.04□□□□□ -0.64
PRPF3-202ENST00000467329 ZNF277Q9NRM2 450 aaPredicted RBP11.04□□□□□ -0.64
PRPF3-202ENST00000467329 SCNN1DP51172 638 aa11.04□□□□□ -0.64
PRPF3-202ENST00000467329 DGKHQ86XP1 1220 aa11.04□□□□□ -0.64
PRPF3-202ENST00000467329 ZNF654Q8IZM8 581 aa11.04□□□□□ -0.64
PRPF3-202ENST00000467329 MAP3K14Q99558 947 aa11.04□□□□□ -0.64
PRPF3-202ENST00000467329 OSBPL5Q9H0X9 879 aaPredicted RBP11.04□□□□□ -0.64
PRPF3-202ENST00000467329 EHD4Q9H223 541 aa11.04□□□□□ -0.64
PRPF3-202ENST00000467329 SWAP70Q9UH65 585 aa11.04□□□□□ -0.64
PRPF3-202ENST00000467329 IFIT1BQ5T764 474 aaKnown RBP11.03□□□□□ -0.64
PRPF3-202ENST00000467329 KIAA0825Q8IV33 1275 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 TMEM87AQ8NBN3 555 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 SENP2Q9HC62 589 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 SAP30BPQ9UHR5 308 aaKnown RBP11.03□□□□□ -0.64
PRPF3-202ENST00000467329 HDAC9Q9UKV0 1011 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 SMIM22K7EJ46 135 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 IFNAR1P17181 557 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 CDK8P49336 464 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 GABPAQ06546 454 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 RTN1Q16799 776 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 CATIPQ7Z7H3 387 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 DHX36Q9H2U1 1008 aaKnown RBP11.03□□□□□ -0.64
PRPF3-202ENST00000467329 ZSCAN16Q9H4T2 348 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-202ENST00000467329 MKNK2Q9HBH9 465 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 SPON1Q9HCB6 807 aa11.03□□□□□ -0.64
PRPF3-202ENST00000467329 FAM217BQ9NTX9 383 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-202ENST00000467329 RBM28Q9NW13 759 aaKnown RBP11.03□□□□□ -0.64
PRPF3-202ENST00000467329 VPS37CA5D8V6 355 aaPredicted RBP11.02□□□□□ -0.65
PRPF3-202ENST00000467329 PSDA5PKW4 1024 aaPredicted RBP11.02□□□□□ -0.65
PRPF3-202ENST00000467329 TSPY2A6NKD2 308 aa11.02□□□□□ -0.65
PRPF3-202ENST00000467329 NFKBIEO00221 500 aa11.02□□□□□ -0.65
PRPF3-202ENST00000467329 ENTPD3O75355 529 aa11.02□□□□□ -0.65
PRPF3-202ENST00000467329 PRDM1O75626 825 aa11.02□□□□□ -0.65
PRPF3-202ENST00000467329 HLA-DOAP06340 250 aa11.02□□□□□ -0.65
PRPF3-202ENST00000467329 RASA1P20936 1047 aa11.02□□□□□ -0.65
PRPF3-202ENST00000467329 PLCD1P51178 756 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms