RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 ZNF341Q9BYN7 854 aa19.44■□□□□ 0.7
HLA-C-205ENST00000466892 SSC5DA1L4H1 1573 aa19.44■□□□□ 0.7
HLA-C-205ENST00000466892 IREB2P48200 963 aaKnown RBP19.43■□□□□ 0.7
HLA-C-205ENST00000466892 PLCD1P51178 756 aa19.43■□□□□ 0.7
HLA-C-205ENST00000466892 PPARAQ07869 468 aa19.43■□□□□ 0.7
HLA-C-205ENST00000466892 C16orf86Q6ZW13 317 aa19.43■□□□□ 0.7
HLA-C-205ENST00000466892 GINM1Q9NU53 330 aa19.43■□□□□ 0.7
HLA-C-205ENST00000466892 ZNF213O14771 459 aa19.42■□□□□ 0.7
HLA-C-205ENST00000466892 CELF2O95319 508 aaKnown RBP19.42■□□□□ 0.7
HLA-C-205ENST00000466892 PTH1RQ03431 593 aa19.42■□□□□ 0.7
HLA-C-205ENST00000466892 PDE4BQ07343 736 aa19.42■□□□□ 0.7
HLA-C-205ENST00000466892 C8orf34Q49A92 452 aa19.42■□□□□ 0.7
HLA-C-205ENST00000466892 PRAMEF18Q5VWM3 479 aa19.42■□□□□ 0.7
HLA-C-205ENST00000466892 ARMC9Q7Z3E5 817 aa19.42■□□□□ 0.7
HLA-C-205ENST00000466892 CDAN1Q8IWY9 1227 aa19.42■□□□□ 0.7
HLA-C-205ENST00000466892 C2orf69Q8N8R5 385 aa19.42■□□□□ 0.7
HLA-C-205ENST00000466892 RNF41Q9H4P4 317 aaPredicted RBP19.42■□□□□ 0.7
HLA-C-205ENST00000466892 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.42■□□□□ 0.7
HLA-C-205ENST00000466892 GBA2Q9HCG7 927 aaPredicted RBP19.42■□□□□ 0.7
HLA-C-205ENST00000466892 ZNF112Q9UJU3 913 aa19.42■□□□□ 0.7
HLA-C-205ENST00000466892 NAV1Q8NEY1 1877 aa19.41■□□□□ 0.7
HLA-C-205ENST00000466892 MINDY4BA8MYZ0 360 aa19.41■□□□□ 0.7
HLA-C-205ENST00000466892 RNF20Q5VTR2 975 aa19.41■□□□□ 0.7
HLA-C-205ENST00000466892 TATDN1Q6P1N9 297 aa19.41■□□□□ 0.7
HLA-C-205ENST00000466892 KLRG1Q96E93 195 aa19.41■□□□□ 0.7
HLA-C-205ENST00000466892 FGRP09769 529 aa19.4■□□□□ 0.7
HLA-C-205ENST00000466892 RBM8AQ9Y5S9 174 aaKnown RBP19.4■□□□□ 0.7
HLA-C-205ENST00000466892 PAPPA2Q9BXP8 1791 aa19.39■□□□□ 0.7
HLA-C-205ENST00000466892 CDK5RAP2Q96SN8 1893 aa19.39■□□□□ 0.7
HLA-C-205ENST00000466892 TMEM88BA6NKF7 163 aa19.39■□□□□ 0.69
HLA-C-205ENST00000466892 PHF20L1A8MW92 1017 aa19.39■□□□□ 0.69
HLA-C-205ENST00000466892 CTNND1O60716 968 aaKnown RBP19.39■□□□□ 0.69
HLA-C-205ENST00000466892 CYP2D6P10635 497 aa19.39■□□□□ 0.69
HLA-C-205ENST00000466892 NECTIN1Q15223 517 aa19.39■□□□□ 0.69
HLA-C-205ENST00000466892 CST9Q5W186 159 aa19.39■□□□□ 0.69
HLA-C-205ENST00000466892 MIGA2Q7L4E1 593 aa19.39■□□□□ 0.69
HLA-C-205ENST00000466892 ANKRD13AQ8IZ07 590 aa19.39■□□□□ 0.69
HLA-C-205ENST00000466892 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.39■□□□□ 0.692e-7■□□□□ 10.1
HLA-C-205ENST00000466892 STAG1Q8WVM7 1258 aa19.39■□□□□ 0.69
HLA-C-205ENST00000466892 HHIPL1Q96JK4 782 aa19.39■□□□□ 0.69
HLA-C-205ENST00000466892 CCDC17Q96LX7 622 aa19.39■□□□□ 0.69
HLA-C-205ENST00000466892 DNAJC18Q9H819 358 aa19.39■□□□□ 0.69
HLA-C-205ENST00000466892 ZNF408Q9H9D4 720 aa19.39■□□□□ 0.69
HLA-C-205ENST00000466892 CYP2D7A0A087X1C5 515 aa19.38■□□□□ 0.69
HLA-C-205ENST00000466892 USP2O75604 605 aaPredicted RBP19.38■□□□□ 0.69
HLA-C-205ENST00000466892 CDK8P49336 464 aa19.38■□□□□ 0.69
HLA-C-205ENST00000466892 APLP1P51693 650 aa19.38■□□□□ 0.69
HLA-C-205ENST00000466892 NOL9Q5SY16 702 aaKnown RBP19.38■□□□□ 0.69
HLA-C-205ENST00000466892 AKNAD1Q5T1N1 836 aa19.38■□□□□ 0.69
HLA-C-205ENST00000466892 LDLRAD1Q5T700 205 aa19.38■□□□□ 0.69
HLA-C-205ENST00000466892 DLK2Q6UY11 383 aa19.38■□□□□ 0.69
HLA-C-205ENST00000466892 ORC4O43929 436 aa19.37■□□□□ 0.69
HLA-C-205ENST00000466892 ZKSCAN1P17029 563 aaPredicted RBP19.37■□□□□ 0.69
HLA-C-205ENST00000466892 MCCP23508 829 aa19.37■□□□□ 0.69
HLA-C-205ENST00000466892 SHMT1P34896 483 aa19.37■□□□□ 0.69
HLA-C-205ENST00000466892 MAP3K9P80192 1104 aa19.37■□□□□ 0.69
HLA-C-205ENST00000466892 TTLL12Q14166 644 aaPredicted RBP19.37■□□□□ 0.69
HLA-C-205ENST00000466892 TSGA10IPQ3SY00 556 aa19.37■□□□□ 0.69
HLA-C-205ENST00000466892 MFSD6Q6ZSS7 791 aa19.37■□□□□ 0.69
HLA-C-205ENST00000466892 WRNIP1Q96S55 665 aa19.37■□□□□ 0.69
HLA-C-205ENST00000466892 CNNM2Q9H8M5 875 aa19.37■□□□□ 0.69
HLA-C-205ENST00000466892 MKNK2Q9HBH9 465 aa19.37■□□□□ 0.69
HLA-C-205ENST00000466892 CREBZFQ9NS37 354 aa19.37■□□□□ 0.69
HLA-C-205ENST00000466892 ANGEL1Q9UNK9 670 aaKnown RBP19.37■□□□□ 0.69
HLA-C-205ENST00000466892 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.37■□□□□ 0.69
HLA-C-205ENST00000466892 CYP21A2P08686 494 aa19.36■□□□□ 0.69
HLA-C-205ENST00000466892 HSPA4P34932 840 aa19.36■□□□□ 0.69
HLA-C-205ENST00000466892 CAP2P40123 477 aa19.36■□□□□ 0.69
HLA-C-205ENST00000466892 SLC4A8Q2Y0W8 1093 aa19.36■□□□□ 0.69
HLA-C-205ENST00000466892 CERKLQ49MI3 558 aaPredicted RBP19.36■□□□□ 0.69
HLA-C-205ENST00000466892 DYNLL2Q96FJ2 89 aa19.36■□□□□ 0.69
HLA-C-205ENST00000466892 USP26Q9BXU7 913 aa19.36■□□□□ 0.69
HLA-C-205ENST00000466892 TBC1D2Q9BYX2 928 aa19.36■□□□□ 0.69
HLA-C-205ENST00000466892 CSADQ9Y600 493 aa19.36■□□□□ 0.69
HLA-C-205ENST00000466892 TLL2Q9Y6L7 1015 aa19.36■□□□□ 0.69
HLA-C-205ENST00000466892 ASNSP08243 561 aa19.35■□□□□ 0.69
HLA-C-205ENST00000466892 FMR1Q06787 632 aaKnown RBP eCLIP19.35■□□□□ 0.69
HLA-C-205ENST00000466892 KRT32Q14532 448 aa19.35■□□□□ 0.69
HLA-C-205ENST00000466892 PPP4R3BQ5MIZ7 849 aa19.35■□□□□ 0.69
HLA-C-205ENST00000466892 CREB3L3Q68CJ9 461 aa19.35■□□□□ 0.69
HLA-C-205ENST00000466892 SAPCD2Q86UD0 394 aa19.35■□□□□ 0.69
HLA-C-205ENST00000466892 SCYL3Q8IZE3 742 aa19.35■□□□□ 0.69
HLA-C-205ENST00000466892 KCNB2Q92953 911 aa19.35■□□□□ 0.69
HLA-C-205ENST00000466892 KRT23Q9C075 422 aa19.35■□□□□ 0.69
HLA-C-205ENST00000466892 NBPF3Q9H094 633 aa19.35■□□□□ 0.69
HLA-C-205ENST00000466892 LAMB1P07942 1786 aa19.34■□□□□ 0.69
HLA-C-205ENST00000466892 MYH1P12882 1939 aa19.34■□□□□ 0.69
HLA-C-205ENST00000466892 SLC27A2O14975 620 aa19.34■□□□□ 0.69
HLA-C-205ENST00000466892 HAND2P61296 217 aa19.34■□□□□ 0.69
HLA-C-205ENST00000466892 CTDSPL2Q05D32 466 aa19.34■□□□□ 0.69
HLA-C-205ENST00000466892 TRDNQ13061 729 aa19.34■□□□□ 0.69
HLA-C-205ENST00000466892 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.34■□□□□ 0.69
HLA-C-205ENST00000466892 ZNF444Q8N0Y2 327 aaPredicted RBP19.34■□□□□ 0.69
HLA-C-205ENST00000466892 ESR2Q92731 530 aa19.34■□□□□ 0.69
HLA-C-205ENST00000466892 UPF2Q9HAU5 1272 aaKnown RBP19.34■□□□□ 0.69
HLA-C-205ENST00000466892 CABP5Q9NP86 173 aa19.34■□□□□ 0.69
HLA-C-205ENST00000466892 PLIN4Q96Q06 1357 aa19.33■□□□□ 0.69
HLA-C-205ENST00000466892 SIPA1L1O43166 1804 aa19.33■□□□□ 0.69
HLA-C-205ENST00000466892 RASA1P20936 1047 aa19.33■□□□□ 0.68
HLA-C-205ENST00000466892 EVX2Q03828 476 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms