RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 ADAM33Q9BZ11 813 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 CRNKL1Q9BZJ0 848 aaKnown RBP9.72□□□□□ -0.85
RPA3-205ENST00000462723 NAPBQ9H115 298 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 MROH7-TTC4A0A0A0MT08 1334 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 FER1L6Q2WGJ9 1857 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 ARFGEF1Q9Y6D6 1849 aa9.71□□□□□ -0.85
RPA3-205ENST00000462723 USP17L3A6NCW0 530 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 SOWAHBA6NEL2 793 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 GSG1L2A8MUP6 293 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 PRKAB2O43741 272 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 SLC4A3P48751 1232 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 DYNLL1P63167 89 aaKnown RBP9.71□□□□□ -0.86
RPA3-205ENST00000462723 DIXDC1Q155Q3 683 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 GRIK5Q16478 980 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 ADCK5Q3MIX3 580 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 GIMAP6Q6P9H5 292 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 RUFY3Q7L099 469 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 NEK1Q96PY6 1258 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 TAOK3Q9H2K8 898 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 ZNF277Q9NRM2 450 aaPredicted RBP9.71□□□□□ -0.86
RPA3-205ENST00000462723 PDRG1Q9NUG6 133 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 AATFQ9NY61 560 aaKnown RBP eCLIP9.71□□□□□ -0.86
RPA3-205ENST00000462723 RABGEF1Q9UJ41 708 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 BCS1LQ9Y276 419 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 SCN9AQ15858 1988 aa9.71□□□□□ -0.86
RPA3-205ENST00000462723 PSME4Q14997 1843 aa9.7□□□□□ -0.86
RPA3-205ENST00000462723 E7EWF7 191 aa9.7□□□□□ -0.86
RPA3-205ENST00000462723 CD2BP2O95400 341 aaKnown RBP9.7□□□□□ -0.86
RPA3-205ENST00000462723 HSP90AA1P07900 732 aaKnown RBP9.7□□□□□ -0.86
RPA3-205ENST00000462723 RPS6KB1P23443 525 aa9.7□□□□□ -0.86
RPA3-205ENST00000462723 IARSP41252 1262 aaKnown RBP9.7□□□□□ -0.86
RPA3-205ENST00000462723 PPP4CP60510 307 aa9.7□□□□□ -0.86
RPA3-205ENST00000462723 HAND2P61296 217 aa9.7□□□□□ -0.86
RPA3-205ENST00000462723 DACT2Q5SW24 774 aa9.7□□□□□ -0.86
RPA3-205ENST00000462723 NIM1KQ8IY84 436 aa9.7□□□□□ -0.86
RPA3-205ENST00000462723 CERS5Q8N5B7 392 aa9.7□□□□□ -0.86
RPA3-205ENST00000462723 NLGN2Q8NFZ4 835 aa9.7□□□□□ -0.86
RPA3-205ENST00000462723 EPB41L4AQ9HCS5 686 aaPredicted RBP9.7□□□□□ -0.86
RPA3-205ENST00000462723 ATP8A2Q9NTI2 1148 aa9.7□□□□□ -0.86
RPA3-205ENST00000462723 TTF2Q9UNY4 1162 aaKnown RBP9.7□□□□□ -0.86
RPA3-205ENST00000462723 TAF6LQ9Y6J9 622 aa9.7□□□□□ -0.86
RPA3-205ENST00000462723 GAKO14976 1311 aa9.7□□□□□ -0.86
RPA3-205ENST00000462723 GPR75-ASB3A0A0A6YYF3 556 aa9.69□□□□□ -0.86
RPA3-205ENST00000462723 F8W031 263 aaPredicted RBP9.69□□□□□ -0.86
RPA3-205ENST00000462723 BTDP43251 543 aa9.69□□□□□ -0.86
RPA3-205ENST00000462723 TRDNQ13061 729 aa9.69□□□□□ -0.86
RPA3-205ENST00000462723 ANKRD1Q15327 319 aa9.69□□□□□ -0.86
RPA3-205ENST00000462723 RALYLQ86SE5 291 aaKnown RBP9.69□□□□□ -0.86
RPA3-205ENST00000462723 SDR42E1Q8WUS8 393 aa9.69□□□□□ -0.86
RPA3-205ENST00000462723 MYO3BQ8WXR4 1341 aa9.69□□□□□ -0.86
RPA3-205ENST00000462723 TEKT1Q969V4 418 aa9.69□□□□□ -0.86
RPA3-205ENST00000462723 TTC14Q96N46 770 aa9.69□□□□□ -0.86
RPA3-205ENST00000462723 LTBP3Q9NS15 1303 aa9.69□□□□□ -0.86
RPA3-205ENST00000462723 ZNRF3Q9ULT6 936 aa9.69□□□□□ -0.86
RPA3-205ENST00000462723 BAZ2AQ9UIF9 1905 aaKnown RBP9.68□□□□□ -0.86
RPA3-205ENST00000462723 ZNF646O15015 1829 aaPredicted RBP9.68□□□□□ -0.86
RPA3-205ENST00000462723 YDJCA8MPS7 323 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 NRG2O14511 850 aaPredicted RBP9.68□□□□□ -0.86
RPA3-205ENST00000462723 CPA1P15085 419 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 USP5P45974 858 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 AK2P54819 239 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 FGD1P98174 961 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 HDLBPQ00341 1268 aaKnown RBP9.68□□□□□ -0.86
RPA3-205ENST00000462723 ZNF787Q6DD87 383 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 HHIPL2Q6UWX4 724 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 STOX1Q6ZVD7 989 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 DHX32Q7L7V1 743 aaKnown RBP9.68□□□□□ -0.86
RPA3-205ENST00000462723 AMOTL1Q8IY63 956 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 NCOA7Q8NI08 942 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 SH3RF3Q8TEJ3 882 aaPredicted RBP9.68□□□□□ -0.86
RPA3-205ENST00000462723 JDP2Q8WYK2 163 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 MXD3Q9BW11 206 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 MRIQ9BWK5 157 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 FHDC1Q9C0D6 1143 aaPredicted RBP9.68□□□□□ -0.86
RPA3-205ENST00000462723 ALDH8A1Q9H2A2 487 aaPredicted RBP9.68□□□□□ -0.86
RPA3-205ENST00000462723 RNF41Q9H4P4 317 aaPredicted RBP9.68□□□□□ -0.86
RPA3-205ENST00000462723 CNNM2Q9H8M5 875 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 KCNQ5Q9NR82 932 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 WBP1LQ9NX94 342 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 ARPP21Q9UBL0 812 aaPredicted RBP9.68□□□□□ -0.86
RPA3-205ENST00000462723 LIMCH1Q9UPQ0 1083 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 DAGLAQ9Y4D2 1042 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 TIAM2Q8IVF5 1701 aa9.68□□□□□ -0.86
RPA3-205ENST00000462723 MINDY4BA8MYZ0 360 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 NFKBIEO00221 500 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 SLC3A2P08195 630 aaKnown RBP9.67□□□□□ -0.86
RPA3-205ENST00000462723 MCM5P33992 734 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 SCNN1DP51172 638 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 PPARAQ07869 468 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 AKNAD1Q5T1N1 836 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 RSBN1LQ6PCB5 846 aaPredicted RBP9.67□□□□□ -0.86
RPA3-205ENST00000462723 MFSD6Q6ZSS7 791 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 NOL8Q76FK4 1167 aaKnown RBP9.67□□□□□ -0.86
RPA3-205ENST00000462723 TBC1D10CQ8IV04 446 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 KIAA0825Q8IV33 1275 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 TEX11Q8IYF3 940 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 ZSCAN31Q96LW9 406 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms