RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 FAM151AQ8WW52 585 aa11.97□□□□□ -0.49
VPS45-204ENST00000460366 RIOK1Q9BRS2 568 aaKnown RBP11.97□□□□□ -0.49
VPS45-204ENST00000460366 AATFQ9NY61 560 aaKnown RBP eCLIP11.97□□□□□ -0.49
VPS45-204ENST00000460366 DOCK2Q92608 1830 aa11.97□□□□□ -0.49
VPS45-204ENST00000460366 TCP10L2B9ZVM9 353 aa11.96□□□□□ -0.49
VPS45-204ENST00000460366 ADM5C9JUS6 153 aa11.96□□□□□ -0.49
VPS45-204ENST00000460366 HIP1O00291 1037 aa11.96□□□□□ -0.49
VPS45-204ENST00000460366 C1QTNF8P60827 252 aa11.96□□□□□ -0.49
VPS45-204ENST00000460366 SUPT20HL1Q3ZLR7 823 aa11.96□□□□□ -0.49
VPS45-204ENST00000460366 ZMYM1Q5SVZ6 1142 aa11.96□□□□□ -0.49
VPS45-204ENST00000460366 PAXIP1Q6ZW49 1069 aaPredicted RBP11.96□□□□□ -0.49
VPS45-204ENST00000460366 SPNS2Q8IVW8 549 aa11.96□□□□□ -0.49
VPS45-204ENST00000460366 TEX11Q8IYF3 940 aa11.96□□□□□ -0.49
VPS45-204ENST00000460366 SH3RF3Q8TEJ3 882 aaPredicted RBP11.96□□□□□ -0.49
VPS45-204ENST00000460366 RILPL2Q969X0 211 aa11.96□□□□□ -0.49
VPS45-204ENST00000460366 FAM198AQ9UFP1 575 aa11.96□□□□□ -0.49
VPS45-204ENST00000460366 MAST2Q6P0Q8 1798 aa11.95□□□□□ -0.5
VPS45-204ENST00000460366 CNTNAP1P78357 1384 aa11.95□□□□□ -0.5
VPS45-204ENST00000460366 RPAP1Q9BWH6 1393 aaPredicted RBP11.95□□□□□ -0.5
VPS45-204ENST00000460366 TRAF5O00463 557 aa11.95□□□□□ -0.5
VPS45-204ENST00000460366 GSPT1P15170 499 aaKnown RBP11.95□□□□□ -0.5
VPS45-204ENST00000460366 SDSP20132 328 aa11.95□□□□□ -0.5
VPS45-204ENST00000460366 RGS3P49796 1198 aa11.95□□□□□ -0.5
VPS45-204ENST00000460366 NFIAQ12857 509 aa11.95□□□□□ -0.5
VPS45-204ENST00000460366 MIGA1Q8NAN2 632 aa11.95□□□□□ -0.5
VPS45-204ENST00000460366 OSBP2Q969R2 916 aa11.95□□□□□ -0.5
VPS45-204ENST00000460366 HOOK2Q96ED9 719 aa11.95□□□□□ -0.5
VPS45-204ENST00000460366 CDCA5Q96FF9 252 aa11.95□□□□□ -0.5
VPS45-204ENST00000460366 TEPSINQ96N21 525 aa11.95□□□□□ -0.5
VPS45-204ENST00000460366 CRNKL1Q9BZJ0 848 aaKnown RBP11.95□□□□□ -0.5
VPS45-204ENST00000460366 POLR2AP24928 1970 aaKnown RBP11.94□□□□□ -0.5
VPS45-204ENST00000460366 MYO5AQ9Y4I1 1855 aaKnown RBP11.94□□□□□ -0.5
VPS45-204ENST00000460366 GNAT2P19087 354 aa11.94□□□□□ -0.5
VPS45-204ENST00000460366 NF2P35240 595 aa11.94□□□□□ -0.5
VPS45-204ENST00000460366 CACNB3P54284 484 aa11.94□□□□□ -0.5
VPS45-204ENST00000460366 DYNLL1P63167 89 aaKnown RBP11.94□□□□□ -0.5
VPS45-204ENST00000460366 FKBP1BP68106 108 aa11.94□□□□□ -0.5
VPS45-204ENST00000460366 BMP2KLQ5H9B9 411 aa11.94□□□□□ -0.5
VPS45-204ENST00000460366 TGFBRAP1Q8WUH2 860 aa11.94□□□□□ -0.5
VPS45-204ENST00000460366 AIDAQ96BJ3 306 aa11.94□□□□□ -0.5
VPS45-204ENST00000460366 STRBPQ96SI9 672 aaKnown RBP11.94□□□□□ -0.5
VPS45-204ENST00000460366 PUS7LQ9H0K6 701 aaKnown RBP11.94□□□□□ -0.5
VPS45-204ENST00000460366 DHX36Q9H2U1 1008 aaKnown RBP11.94□□□□□ -0.5
VPS45-204ENST00000460366 HELLSQ9NRZ9 838 aa11.94□□□□□ -0.5
VPS45-204ENST00000460366 ECM29Q5VYK3 1845 aa11.94□□□□□ -0.5
VPS45-204ENST00000460366 MBD4O95243 580 aa11.93□□□□□ -0.5
VPS45-204ENST00000460366 CHGBP05060 677 aa11.93□□□□□ -0.5
VPS45-204ENST00000460366 APLP1P51693 650 aa11.93□□□□□ -0.5
VPS45-204ENST00000460366 TCP10Q12799 353 aa11.93□□□□□ -0.5
VPS45-204ENST00000460366 SLFNL1Q499Z3 407 aa11.93□□□□□ -0.5
VPS45-204ENST00000460366 MCMDC2Q4G0Z9 681 aa11.93□□□□□ -0.5
VPS45-204ENST00000460366 CST9Q5W186 159 aa11.93□□□□□ -0.5
VPS45-204ENST00000460366 GIMAP6Q6P9H5 292 aa11.93□□□□□ -0.5
VPS45-204ENST00000460366 LCORLQ8N3X6 602 aa11.93□□□□□ -0.5
VPS45-204ENST00000460366 TMEM39BQ9GZU3 492 aa11.93□□□□□ -0.5
VPS45-204ENST00000460366 OSBPL5Q9H0X9 879 aaPredicted RBP11.93□□□□□ -0.5
VPS45-204ENST00000460366 DDX4Q9NQI0 724 aaKnown RBP11.93□□□□□ -0.5
VPS45-204ENST00000460366 ATP8A2Q9NTI2 1148 aa11.93□□□□□ -0.5
VPS45-204ENST00000460366 MKRN1Q9UHC7 482 aaKnown RBP11.93□□□□□ -0.5
VPS45-204ENST00000460366 COL2A1P02458 1487 aaPredicted RBP11.93□□□□□ -0.5
VPS45-204ENST00000460366 ATRNL1Q5VV63 1379 aa11.92□□□□□ -0.5
VPS45-204ENST00000460366 UNCXA6NJT0 531 aa11.92□□□□□ -0.5
VPS45-204ENST00000460366 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
VPS45-204ENST00000460366 PPP1R12BO60237 982 aaPredicted RBP11.92□□□□□ -0.5
VPS45-204ENST00000460366 CELF2O95319 508 aaKnown RBP11.92□□□□□ -0.5
VPS45-204ENST00000460366 USP5P45974 858 aa11.92□□□□□ -0.5
VPS45-204ENST00000460366 MAP3K10Q02779 954 aa11.92□□□□□ -0.5
VPS45-204ENST00000460366 NBPF12Q5TAG4 269 aaPredicted RBP11.92□□□□□ -0.5
VPS45-204ENST00000460366 PRAMEF18Q5VWM3 479 aa11.92□□□□□ -0.5
VPS45-204ENST00000460366 ZFPM1Q8IX07 1006 aa11.92□□□□□ -0.5
VPS45-204ENST00000460366 C2orf69Q8N8R5 385 aa11.92□□□□□ -0.5
VPS45-204ENST00000460366 ARMT1Q9H993 441 aa11.92□□□□□ -0.5
VPS45-204ENST00000460366 DIAPH3Q9NSV4 1193 aa11.92□□□□□ -0.5
VPS45-204ENST00000460366 SCAF8Q9UPN6 1271 aaKnown RBP11.92□□□□□ -0.5
VPS45-204ENST00000460366 FLT1P17948 1338 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 PATL2C9JE40 543 aaKnown RBP11.91□□□□□ -0.5
VPS45-204ENST00000460366 GPAA1O43292 621 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 TBC1D12O60347 775 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 MFAP1P55081 439 aaKnown RBP11.91□□□□□ -0.5
VPS45-204ENST00000460366 FMR1Q06787 632 aaKnown RBP eCLIP11.91□□□□□ -0.5
VPS45-204ENST00000460366 PICALMQ13492 652 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 MAP3K11Q16584 847 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 DCAF15Q66K64 600 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 DLK2Q6UY11 383 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 SH3BP5LQ7L8J4 393 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 ARMC9Q7Z3E5 817 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 METTL16Q86W50 562 aaKnown RBP11.91□□□□□ -0.5
VPS45-204ENST00000460366 FOXP4Q8IVH2 680 aaPredicted RBP11.91□□□□□ -0.5
VPS45-204ENST00000460366 MAPKAPK5Q8IW41 473 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 RUFY2Q8WXA3 655 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 DDRGK1Q96HY6 314 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 GBA2Q9HCG7 927 aaPredicted RBP11.91□□□□□ -0.5
VPS45-204ENST00000460366 DCP1AQ9NPI6 582 aaPredicted RBP11.91□□□□□ -0.5
VPS45-204ENST00000460366 PI4KBQ9UBF8 816 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 MYH7P12883 1935 aa11.91□□□□□ -0.5
VPS45-204ENST00000460366 DDTLA6NHG4 134 aaPredicted RBP11.9□□□□□ -0.5
VPS45-204ENST00000460366 M0R2C6 588 aa11.9□□□□□ -0.5
VPS45-204ENST00000460366 HSPA6P17066 643 aa11.9□□□□□ -0.5
VPS45-204ENST00000460366 CHMLP26374 656 aa11.9□□□□□ -0.5
VPS45-204ENST00000460366 NMIQ13287 307 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms