RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 OLFM4Q6UX06 510 aa15.83■□□□□ 0.12
CLK3-203ENST00000454830 ILDR1Q86SU0 546 aaPredicted RBP15.83■□□□□ 0.12
CLK3-203ENST00000454830 SH3RF3Q8TEJ3 882 aaPredicted RBP15.83■□□□□ 0.12
CLK3-203ENST00000454830 GUCY1A2P33402 732 aa15.83■□□□□ 0.12
CLK3-203ENST00000454830 GTF2IP78347 998 aa15.83■□□□□ 0.12
CLK3-203ENST00000454830 GSTO1P78417 241 aa15.83■□□□□ 0.12
CLK3-203ENST00000454830 ZNF772Q68DY9 489 aaPredicted RBP15.83■□□□□ 0.12
CLK3-203ENST00000454830 PCDHA7Q9UN72 937 aa15.83■□□□□ 0.12
CLK3-203ENST00000454830 BBOX1O75936 387 aa15.82■□□□□ 0.12
CLK3-203ENST00000454830 MMP10P09238 476 aa15.82■□□□□ 0.12
CLK3-203ENST00000454830 ZNF827Q17R98 1081 aa15.82■□□□□ 0.12
CLK3-203ENST00000454830 ENAHQ8N8S7 591 aaPredicted RBP15.82■□□□□ 0.12
CLK3-203ENST00000454830 DYNLL2Q96FJ2 89 aa15.82■□□□□ 0.12
CLK3-203ENST00000454830 CLSTN2Q9H4D0 955 aa15.82■□□□□ 0.12
CLK3-203ENST00000454830 PARP3Q9Y6F1 533 aa15.82■□□□□ 0.12
CLK3-203ENST00000454830 ANO6Q4KMQ2 910 aa15.82■□□□□ 0.12
CLK3-203ENST00000454830 ATP8A2Q9NTI2 1148 aa15.82■□□□□ 0.12
CLK3-203ENST00000454830 SCN7AQ01118 1682 aa15.82■□□□□ 0.12
CLK3-203ENST00000454830 POLRMTO00411 1230 aaKnown RBP15.82■□□□□ 0.12
CLK3-203ENST00000454830 ANO1Q5XXA6 986 aa15.82■□□□□ 0.12
CLK3-203ENST00000454830 COL23A1Q86Y22 540 aaPredicted RBP15.82■□□□□ 0.12
CLK3-203ENST00000454830 NLGN1Q8N2Q7 840 aa15.82■□□□□ 0.12
CLK3-203ENST00000454830 CTCFLQ8NI51 663 aaPredicted RBP15.82■□□□□ 0.12
CLK3-203ENST00000454830 ZC3H12CQ9C0D7 883 aaKnown RBP15.82■□□□□ 0.12
CLK3-203ENST00000454830 FAM217BQ9NTX9 383 aaPredicted RBP15.82■□□□□ 0.12
CLK3-203ENST00000454830 BAZ2BQ9UIF8 2168 aaKnown RBP15.82■□□□□ 0.12
CLK3-203ENST00000454830 PPEF1O14829 653 aaPredicted RBP15.81■□□□□ 0.12
CLK3-203ENST00000454830 TDRD7Q8NHU6 1098 aaKnown RBP15.81■□□□□ 0.12
CLK3-203ENST00000454830 MRPS27Q92552 414 aaKnown RBP15.81■□□□□ 0.12
CLK3-203ENST00000454830 PPP1R9BQ96SB3 815 aa15.81■□□□□ 0.12
CLK3-203ENST00000454830 BTBD18B2RXH4 712 aa15.81■□□□□ 0.12
CLK3-203ENST00000454830 A0A087WWV3 80 aa15.81■□□□□ 0.12
CLK3-203ENST00000454830 IFNAR1P17181 557 aa15.81■□□□□ 0.12
CLK3-203ENST00000454830 DOK7Q18PE1 504 aa15.81■□□□□ 0.12
CLK3-203ENST00000454830 ATL3Q6DD88 541 aa15.81■□□□□ 0.12
CLK3-203ENST00000454830 DIS3L2Q8IYB7 885 aaKnown RBP15.81■□□□□ 0.12
CLK3-203ENST00000454830 KCNG4Q8TDN1 519 aa15.81■□□□□ 0.12
CLK3-203ENST00000454830 DNAJC25Q9H1X3 360 aa15.81■□□□□ 0.12
CLK3-203ENST00000454830 GOLPH3LQ9H4A5 285 aa15.81■□□□□ 0.12
CLK3-203ENST00000454830 ARPP21Q9UBL0 812 aaPredicted RBP15.81■□□□□ 0.12
CLK3-203ENST00000454830 POLLQ9UGP5 575 aa15.81■□□□□ 0.12
CLK3-203ENST00000454830 STX8Q9UNK0 236 aa15.81■□□□□ 0.12
CLK3-203ENST00000454830 V9GY48 417 aaPredicted RBP15.81■□□□□ 0.12
CLK3-203ENST00000454830 ADCY5O95622 1261 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 TFAP4Q01664 338 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 LUZP1Q86V48 1076 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 TEX11Q8IYF3 940 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 ZNF444Q8N0Y2 327 aaPredicted RBP15.8■□□□□ 0.12
CLK3-203ENST00000454830 TBC1D16Q8TBP0 767 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 FMNL1O95466 1100 aaPredicted RBP15.8■□□□□ 0.12
CLK3-203ENST00000454830 XBP1P17861 261 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 RXRBP28702 533 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 BTDP43251 543 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 PICALMQ13492 652 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 NTRK3Q16288 839 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 DRC7Q8IY82 874 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 LINC00301Q8NCQ3 95 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 RTEL1Q9NZ71 1219 aa15.8■□□□□ 0.12
CLK3-203ENST00000454830 LAMB2P55268 1798 aa15.79■□□□□ 0.12
CLK3-203ENST00000454830 SPC24Q8NBT2 197 aa15.79■□□□□ 0.12
CLK3-203ENST00000454830 SLC44A5Q8NCS7 719 aa15.79■□□□□ 0.12
CLK3-203ENST00000454830 VPS54Q9P1Q0 977 aa15.79■□□□□ 0.12
CLK3-203ENST00000454830 DEXIO95424 95 aa15.79■□□□□ 0.12
CLK3-203ENST00000454830 ARAP2Q8WZ64 1704 aa15.79■□□□□ 0.12
CLK3-203ENST00000454830 BAZ2AQ9UIF9 1905 aaKnown RBP15.79■□□□□ 0.12
CLK3-203ENST00000454830 PLEKHA8P1O95397 391 aa15.79■□□□□ 0.12
CLK3-203ENST00000454830 TSPY3P0CV98 308 aa15.79■□□□□ 0.12
CLK3-203ENST00000454830 TSPY8P0CW00 308 aa15.79■□□□□ 0.12
CLK3-203ENST00000454830 FAM160A1Q05DH4 1040 aa15.79■□□□□ 0.12
CLK3-203ENST00000454830 DPP8Q6V1X1 898 aaPredicted RBP15.79■□□□□ 0.12
CLK3-203ENST00000454830 CRACR2BQ8N4Y2 399 aaPredicted RBP15.79■□□□□ 0.12
CLK3-203ENST00000454830 KAT14Q9H8E8 782 aa15.79■□□□□ 0.12
CLK3-203ENST00000454830 ANAPC4Q9UJX5 808 aa15.79■□□□□ 0.12
CLK3-203ENST00000454830 CICQ96RK0 1608 aaPredicted RBP15.78■□□□□ 0.12
CLK3-203ENST00000454830 BECN2A8MW95 431 aa15.78■□□□□ 0.12
CLK3-203ENST00000454830 ZNF165P49910 485 aa15.78■□□□□ 0.12
CLK3-203ENST00000454830 CRY2Q49AN0 593 aa15.78■□□□□ 0.12
CLK3-203ENST00000454830 JMYQ8N9B5 988 aa15.78■□□□□ 0.12
CLK3-203ENST00000454830 GOLGA6L19H0YKK7 550 aa15.78■□□□□ 0.12
CLK3-203ENST00000454830 NR5A1Q13285 461 aa15.78■□□□□ 0.12
CLK3-203ENST00000454830 FAM200AQ8TCP9 573 aa15.78■□□□□ 0.12
CLK3-203ENST00000454830 BIN1O00499 593 aa15.77■□□□□ 0.12
CLK3-203ENST00000454830 NDUFA8P51970 172 aa15.77■□□□□ 0.12
CLK3-203ENST00000454830 MRVI1Q9Y6F6 885 aa15.77■□□□□ 0.12
CLK3-203ENST00000454830 YEATS4O95619 227 aa15.77■□□□□ 0.11
CLK3-203ENST00000454830 UVSSAQ2YD98 709 aa15.77■□□□□ 0.11
CLK3-203ENST00000454830 SPECC1Q5M775 1068 aa15.77■□□□□ 0.11
CLK3-203ENST00000454830 ADALQ6DHV7 355 aa15.77■□□□□ 0.11
CLK3-203ENST00000454830 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.77■□□□□ 0.11
CLK3-203ENST00000454830 MYH13Q9UKX3 1938 aa15.77■□□□□ 0.11
CLK3-203ENST00000454830 SEC23AQ15436 765 aa15.77■□□□□ 0.11
CLK3-203ENST00000454830 ISM2Q6H9L7 571 aa15.77■□□□□ 0.11
CLK3-203ENST00000454830 ZSCAN30Q86W11 494 aa15.77■□□□□ 0.11
CLK3-203ENST00000454830 POLR3EQ9NVU0 708 aa15.77■□□□□ 0.11
CLK3-203ENST00000454830 CCDC39Q9UFE4 941 aa15.77■□□□□ 0.11
CLK3-203ENST00000454830 CRAMP1Q96RY5 1269 aa15.76■□□□□ 0.11
CLK3-203ENST00000454830 CABP5Q9NP86 173 aa15.76■□□□□ 0.11
CLK3-203ENST00000454830 TNRC6CQ9HCJ0 1690 aaKnown RBP15.76■□□□□ 0.11
CLK3-203ENST00000454830 SCNN1DP51172 638 aa15.76■□□□□ 0.11
CLK3-203ENST00000454830 CLIC6Q96NY7 704 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms