RNA–Protein interactions for RNA: ENST00000438417.2

TRBV25OR9-2-201, Transcript of T cell receptor beta variable 25/OR9-2 (pseudogene), humanhuman

BASIC

Gene TRBV25OR9-2, Length 374 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25OR9-2-201ENST00000438417 TTBK1Q5TCY1 1321 aaPredicted RBP3.35□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 PRR36Q9H6K5 1346 aa3.35□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 C9orf172C9J069 976 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 F8W735 103 aaPredicted RBP3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 U2SURPO15042 1029 aaKnown RBP3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 FANCGO15287 622 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 TMPRSS2O15393 492 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 SART1O43290 800 aaKnown RBP3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 RNGTTO60942 597 aaKnown RBP3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 PGRP06401 933 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 DRD2P14416 443 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 GLB1P16278 677 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 LORP23490 312 aaPredicted RBP3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 NRG1Q02297 640 aaPredicted RBP3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 SOX4Q06945 474 aaPredicted RBP3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 ZBTB37Q5TC79 503 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 NBPF6Q5VWK0 638 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 SHISA2Q6UWI4 295 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 CDC37L1Q7L3B6 337 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 DYMQ7RTS9 669 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 AGGF1Q8N302 714 aaeCLIP3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 KCT2Q8NC54 265 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 RBBP8NLQ8NC74 664 aaPredicted RBP3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 RNF214Q8ND24 703 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 ZNF507Q8TCN5 953 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 LENG1Q96BZ8 264 aaPredicted RBP3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 NBPF4Q96M43 638 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 FANCD2OSQ96PS1 177 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 CEP41Q9BYV8 373 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 LNPKQ9C0E8 428 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 WNT10AQ9GZT5 417 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 PIDD1Q9HB75 910 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 SSU72Q9NP77 194 aaKnown RBP3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 DISC1Q9NRI5 854 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 GMIPQ9P107 970 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 REV1Q9UBZ9 1251 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 PRKAG3Q9UGI9 489 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 ADAM30Q9UKF2 790 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 CORINQ9Y5Q5 1042 aa3.34□□□□□ -1.87
TRBV25OR9-2-201ENST00000438417 FAM181BA6NEQ2 426 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 SMAD7O15105 426 aaKnown RBP3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 GAS2O43903 313 aaKnown RBP3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 ALX3O95076 343 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 TIAF1O95411 115 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 HCLS1P14317 486 aaPredicted RBP3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 ASPAP45381 313 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 USP11P51784 963 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 YARSP54577 528 aaKnown RBP3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 RING1Q06587 406 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 TTLL4Q14679 1199 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 PPP2R5EQ16537 467 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 CCDC144BQ3MJ40 725 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 TMEM201Q5SNT2 666 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 ALYREFQ86V81 257 aaKnown RBP3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 LSRQ86X29 649 aaPredicted RBP3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 HID1Q8IV36 788 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 FAM13CQ8NE31 585 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 HNRNPLLQ8WVV9 542 aaKnown RBP3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 TMEM40Q8WWA1 233 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 TM9SF2Q99805 663 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 OSBPL2Q9H1P3 480 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 ANTXR1Q9H6X2 564 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 ZSWIM4Q9H7M6 989 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 ACTR10Q9NZ32 417 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 KLHL3Q9UH77 587 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 ACTL7BQ9Y614 415 aa3.33□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 SLC22A31A6NKX4 558 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 MEIS3P2A8K0S8 358 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 KLF4O43474 513 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 HMGB1P09429 215 aaKnown RBP3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 COL8A1P27658 744 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 IREB2P48200 963 aaKnown RBP3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 CASP7P55210 303 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 RAB33AQ14088 237 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 NFE2L2Q16236 605 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 ARSHQ5FYA8 562 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 SLC6A19Q695T7 634 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 OVOS1Q6IE37 1185 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 RUFY4Q6ZNE9 571 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 NLRC3Q7RTR2 1065 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 MCATQ8IVS2 390 aaKnown RBP3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 SMYD4Q8IYR2 804 aaPredicted RBP3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 FAM169BQ8N8A8 192 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 C19orf47Q8N9M1 422 aaKnown RBP3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 C2CD4AQ8NCU7 369 aaPredicted RBP3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 WFDC12Q8WWY7 111 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 ACSF2Q96CM8 615 aaPredicted RBP3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 ATG4CQ96DT6 458 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 TMEM87BQ96K49 555 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 YIPF2Q9BWQ6 316 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 GSX1Q9H4S2 264 aaPredicted RBP3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 FAM105AQ9NUU6 356 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 SIRPGQ9P1W8 387 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 TJP2Q9UDY2 1190 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 PCOLCE2Q9UKZ9 415 aa3.32□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 UPK3BL1B0FP48 263 aa3.31□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 CHURC1-FNTBB4DL54 471 aa3.31□□□□□ -1.88
TRBV25OR9-2-201ENST00000438417 UPK3BL2E5RIL1 263 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms