RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 PI4KBQ9UBF8 816 aa18.29■□□□□ 0.52
CNOT9-205ENST00000433439 FZD1Q9UP38 647 aa18.29■□□□□ 0.52
CNOT9-205ENST00000433439 CELF2O95319 508 aaKnown RBP18.28■□□□□ 0.52
CNOT9-205ENST00000433439 ITGBL1O95965 494 aaPredicted RBP18.28■□□□□ 0.52
CNOT9-205ENST00000433439 PPARAQ07869 468 aa18.28■□□□□ 0.52
CNOT9-205ENST00000433439 ALX1Q15699 326 aa18.28■□□□□ 0.52
CNOT9-205ENST00000433439 C12orf60Q5U649 245 aa18.28■□□□□ 0.52
CNOT9-205ENST00000433439 DYNLL2Q96FJ2 89 aa18.28■□□□□ 0.52
CNOT9-205ENST00000433439 RBM8AQ9Y5S9 174 aaKnown RBP18.28■□□□□ 0.52
CNOT9-205ENST00000433439 U3KPZ7 1027 aaPredicted RBP18.28■□□□□ 0.52
CNOT9-205ENST00000433439 ATRNL1Q5VV63 1379 aa18.28■□□□□ 0.52
CNOT9-205ENST00000433439 CTDSPL2Q05D32 466 aa18.27■□□□□ 0.52
CNOT9-205ENST00000433439 SBK1Q52WX2 424 aa18.27■□□□□ 0.52
CNOT9-205ENST00000433439 HOOK2Q96ED9 719 aa18.27■□□□□ 0.52
CNOT9-205ENST00000433439 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.27■□□□□ 0.52
CNOT9-205ENST00000433439 CTNNA3Q9UI47 895 aa18.27■□□□□ 0.52
CNOT9-205ENST00000433439 COL2A1P02458 1487 aaPredicted RBP18.26■□□□□ 0.51
CNOT9-205ENST00000433439 DDX60LQ5H9U9 1706 aaKnown RBP18.26■□□□□ 0.51
CNOT9-205ENST00000433439 ZNF213O14771 459 aa18.26■□□□□ 0.51
CNOT9-205ENST00000433439 IMMTQ16891 758 aaKnown RBP18.26■□□□□ 0.51
CNOT9-205ENST00000433439 DCAF15Q66K64 600 aa18.26■□□□□ 0.51
CNOT9-205ENST00000433439 FOXP4Q8IVH2 680 aaPredicted RBP18.26■□□□□ 0.51
CNOT9-205ENST00000433439 SLC44A5Q8NCS7 719 aa18.26■□□□□ 0.51
CNOT9-205ENST00000433439 MAP4K1Q92918 833 aa18.26■□□□□ 0.51
CNOT9-205ENST00000433439 SERPINB13Q9UIV8 391 aa18.26■□□□□ 0.51
CNOT9-205ENST00000433439 SEC24BO95487 1268 aa18.25■□□□□ 0.51
CNOT9-205ENST00000433439 HTRA3P83110 453 aa18.25■□□□□ 0.51
CNOT9-205ENST00000433439 FSTL1Q12841 308 aa18.25■□□□□ 0.51
CNOT9-205ENST00000433439 MOB2Q70IA6 237 aa18.25■□□□□ 0.51
CNOT9-205ENST00000433439 TOMM22Q9NS69 142 aa18.25■□□□□ 0.51
CNOT9-205ENST00000433439 PCDH10Q9P2E7 1040 aa18.25■□□□□ 0.51
CNOT9-205ENST00000433439 ANGEL1Q9UNK9 670 aaKnown RBP18.25■□□□□ 0.51
CNOT9-205ENST00000433439 SSC5DA1L4H1 1573 aa18.25■□□□□ 0.51
CNOT9-205ENST00000433439 PPP1R12BO60237 982 aaPredicted RBP18.24■□□□□ 0.51
CNOT9-205ENST00000433439 SLC3A2P08195 630 aaKnown RBP18.24■□□□□ 0.51
CNOT9-205ENST00000433439 ZNF341Q9BYN7 854 aa18.24■□□□□ 0.51
CNOT9-205ENST00000433439 LAMB1P07942 1786 aa18.24■□□□□ 0.51
CNOT9-205ENST00000433439 ZMYM6O95789 1325 aa18.23■□□□□ 0.51
CNOT9-205ENST00000433439 SIPA1L1O43166 1804 aa18.23■□□□□ 0.51
CNOT9-205ENST00000433439 PRDM1O75626 825 aa18.23■□□□□ 0.51
CNOT9-205ENST00000433439 RRP12Q5JTH9 1297 aaKnown RBP18.23■□□□□ 0.51
CNOT9-205ENST00000433439 ARMC9Q7Z3E5 817 aa18.23■□□□□ 0.51
CNOT9-205ENST00000433439 C2orf69Q8N8R5 385 aa18.23■□□□□ 0.51
CNOT9-205ENST00000433439 EHD4Q9H223 541 aa18.23■□□□□ 0.51
CNOT9-205ENST00000433439 DNAJC18Q9H819 358 aa18.23■□□□□ 0.51
CNOT9-205ENST00000433439 GBA2Q9HCG7 927 aaPredicted RBP18.23■□□□□ 0.51
CNOT9-205ENST00000433439 INCENPQ9NQS7 918 aa18.23■□□□□ 0.51
CNOT9-205ENST00000433439 HERC5Q9UII4 1024 aaKnown RBP18.23■□□□□ 0.51
CNOT9-205ENST00000433439 PASKQ96RG2 1323 aa18.23■□□□□ 0.51
CNOT9-205ENST00000433439 UBE2Q2LH0YL09 131 aa18.22■□□□□ 0.51
CNOT9-205ENST00000433439 EIF5BO60841 1220 aaKnown RBP18.22■□□□□ 0.51
CNOT9-205ENST00000433439 USP2O75604 605 aaPredicted RBP18.22■□□□□ 0.51
CNOT9-205ENST00000433439 CDK8P49336 464 aa18.22■□□□□ 0.51
CNOT9-205ENST00000433439 CREB3L3Q68CJ9 461 aa18.22■□□□□ 0.51
CNOT9-205ENST00000433439 TBC1D10CQ8IV04 446 aa18.22■□□□□ 0.51
CNOT9-205ENST00000433439 WRNIP1Q96S55 665 aa18.22■□□□□ 0.51
CNOT9-205ENST00000433439 MKNK2Q9HBH9 465 aa18.22■□□□□ 0.51
CNOT9-205ENST00000433439 TRPM7Q96QT4 1865 aa18.21■□□□□ 0.51
CNOT9-205ENST00000433439 SLC27A2O14975 620 aa18.21■□□□□ 0.51
CNOT9-205ENST00000433439 TBC1D12O60347 775 aa18.21■□□□□ 0.51
CNOT9-205ENST00000433439 CYP21A2P08686 494 aa18.21■□□□□ 0.51
CNOT9-205ENST00000433439 IREB2P48200 963 aaKnown RBP18.21■□□□□ 0.51
CNOT9-205ENST00000433439 GABPAQ06546 454 aa18.21■□□□□ 0.51
CNOT9-205ENST00000433439 PDE4BQ07343 736 aa18.21■□□□□ 0.51
CNOT9-205ENST00000433439 CST9Q5W186 159 aa18.21■□□□□ 0.51
CNOT9-205ENST00000433439 C16orf86Q6ZW13 317 aa18.21■□□□□ 0.51
CNOT9-205ENST00000433439 USP26Q9BXU7 913 aa18.21■□□□□ 0.51
CNOT9-205ENST00000433439 SWAP70Q9UH65 585 aa18.21■□□□□ 0.51
CNOT9-205ENST00000433439 MPHOSPH10O00566 681 aaKnown RBP18.2■□□□□ 0.5
CNOT9-205ENST00000433439 GDF11O95390 407 aa18.2■□□□□ 0.5
CNOT9-205ENST00000433439 INPP5BP32019 993 aa18.2■□□□□ 0.5
CNOT9-205ENST00000433439 SHMT1P34896 483 aa18.2■□□□□ 0.5
CNOT9-205ENST00000433439 NECTIN1Q15223 517 aa18.2■□□□□ 0.5
CNOT9-205ENST00000433439 AKNAD1Q5T1N1 836 aa18.2■□□□□ 0.5
CNOT9-205ENST00000433439 RNF20Q5VTR2 975 aa18.2■□□□□ 0.5
CNOT9-205ENST00000433439 MFSD6Q6ZSS7 791 aa18.2■□□□□ 0.5
CNOT9-205ENST00000433439 NBPF3Q9H094 633 aa18.2■□□□□ 0.5
CNOT9-205ENST00000433439 ANAPC4Q9UJX5 808 aa18.2■□□□□ 0.5
CNOT9-205ENST00000433439 TAF6LQ9Y6J9 622 aa18.2■□□□□ 0.5
CNOT9-205ENST00000433439 ROBO3Q96MS0 1386 aa18.19■□□□□ 0.5
CNOT9-205ENST00000433439 MCCP23508 829 aa18.19■□□□□ 0.5
CNOT9-205ENST00000433439 RRP1BQ14684 758 aaKnown RBP18.19■□□□□ 0.5
CNOT9-205ENST00000433439 CERKLQ49MI3 558 aaPredicted RBP18.19■□□□□ 0.5
CNOT9-205ENST00000433439 ZNF444Q8N0Y2 327 aaPredicted RBP18.19■□□□□ 0.5
CNOT9-205ENST00000433439 ZKSCAN4Q969J2 545 aaPredicted RBP18.19■□□□□ 0.5
CNOT9-205ENST00000433439 RNF41Q9H4P4 317 aaPredicted RBP18.19■□□□□ 0.5
CNOT9-205ENST00000433439 ZNF287Q9HBT7 754 aa18.19■□□□□ 0.5
CNOT9-205ENST00000433439 TACC3Q9Y6A5 838 aa18.19■□□□□ 0.5
CNOT9-205ENST00000433439 LAMA4Q16363 1823 aa18.19■□□□□ 0.5
CNOT9-205ENST00000433439 RANBP6O60518 1105 aaKnown RBP18.18■□□□□ 0.5
CNOT9-205ENST00000433439 MAP3K9P80192 1104 aa18.18■□□□□ 0.5
CNOT9-205ENST00000433439 MAP3K10Q02779 954 aa18.18■□□□□ 0.5
CNOT9-205ENST00000433439 SHROOM1Q2M3G4 852 aaPredicted RBP18.18■□□□□ 0.5
CNOT9-205ENST00000433439 METTL16Q86W50 562 aaKnown RBP18.18■□□□□ 0.5
CNOT9-205ENST00000433439 STAG1Q8WVM7 1258 aa18.18■□□□□ 0.5
CNOT9-205ENST00000433439 BACH2Q9BYV9 841 aa18.18■□□□□ 0.5
CNOT9-205ENST00000433439 ABT1Q9ULW3 272 aaKnown RBP18.18■□□□□ 0.5
CNOT9-205ENST00000433439 CSADQ9Y600 493 aa18.18■□□□□ 0.5
CNOT9-205ENST00000433439 NEDD4P46934 1319 aa18.18■□□□□ 0.5
CNOT9-205ENST00000433439 MYH8P13535 1937 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms