RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 HDAC9Q9UKV0 1011 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 TTC21BQ7Z4L5 1316 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 TUBB4AP04350 444 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 NXNQ6DKJ4 435 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 CERS3Q8IU89 383 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 KLHDC4Q8TBB5 520 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 RIPOR2Q9Y4F9 1068 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 PTPN23Q9H3S7 1636 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 MYCLP12524 364 aaPredicted RBP12.72□□□□□ -0.37
SEC16A-206ENST00000431893 PAK1Q13153 545 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 ERCC6LQ2NKX8 1250 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 USH1GQ495M9 461 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.72□□□□□ -0.37
SEC16A-206ENST00000431893 SYNJ1O43426 1573 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 ARHGAP42A6NI28 874 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 I3L4J1 428 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 SLC27A2O14975 620 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 RDH13Q8NBN7 331 aa12.72□□□□□ -0.37
SEC16A-206ENST00000431893 CETN3O15182 167 aa12.71□□□□□ -0.37
SEC16A-206ENST00000431893 CALUO43852 315 aaPredicted RBP12.71□□□□□ -0.37
SEC16A-206ENST00000431893 KRT19P08727 400 aa12.71□□□□□ -0.37
SEC16A-206ENST00000431893 ANO1Q5XXA6 986 aa12.71□□□□□ -0.37
SEC16A-206ENST00000431893 MORC4Q8TE76 937 aa12.71□□□□□ -0.37
SEC16A-206ENST00000431893 NELFBQ8WX92 580 aa12.71□□□□□ -0.37
SEC16A-206ENST00000431893 COBLO75128 1261 aa12.71□□□□□ -0.37
SEC16A-206ENST00000431893 RPL13P26373 211 aaKnown RBP12.71□□□□□ -0.37
SEC16A-206ENST00000431893 TAOK1Q7L7X3 1001 aa12.71□□□□□ -0.37
SEC16A-206ENST00000431893 PRDM1O75626 825 aa12.71□□□□□ -0.37
SEC16A-206ENST00000431893 CUL4BQ13620 913 aa12.71□□□□□ -0.37
SEC16A-206ENST00000431893 KSR2Q6VAB6 950 aa12.71□□□□□ -0.37
SEC16A-206ENST00000431893 DESI2Q9BSY9 194 aa12.71□□□□□ -0.37
SEC16A-206ENST00000431893 TEX13AQ9BXU3 409 aaPredicted RBP12.71□□□□□ -0.37
SEC16A-206ENST00000431893 TTF2Q9UNY4 1162 aaKnown RBP12.71□□□□□ -0.37
SEC16A-206ENST00000431893 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.71□□□□□ -0.37
SEC16A-206ENST00000431893 BUB1O43683 1085 aa12.71□□□□□ -0.38
SEC16A-206ENST00000431893 GNA11P29992 359 aa12.71□□□□□ -0.38
SEC16A-206ENST00000431893 GNGT1P63211 74 aa12.71□□□□□ -0.38
SEC16A-206ENST00000431893 TRPC3Q13507 836 aa12.71□□□□□ -0.38
SEC16A-206ENST00000431893 CDC37L1Q7L3B6 337 aa12.71□□□□□ -0.38
SEC16A-206ENST00000431893 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.38
SEC16A-206ENST00000431893 MICAL1Q8TDZ2 1067 aa12.71□□□□□ -0.38
SEC16A-206ENST00000431893 KCNJ14Q9UNX9 436 aa12.71□□□□□ -0.38
SEC16A-206ENST00000431893 NSFL1CQ9UNZ2 370 aaKnown RBP12.71□□□□□ -0.38
SEC16A-206ENST00000431893 OGFOD1Q8N543 542 aa12.71□□□□□ -0.38
SEC16A-206ENST00000431893 V9GY48 417 aaPredicted RBP12.71□□□□□ -0.38
SEC16A-206ENST00000431893 IRS4O14654 1257 aaPredicted RBP12.7□□□□□ -0.38
SEC16A-206ENST00000431893 GIGYF1O75420 1035 aaPredicted RBP12.7□□□□□ -0.38
SEC16A-206ENST00000431893 GCKP35557 465 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 MYRIPQ8NFW9 859 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 GBP5Q96PP8 586 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 TROQ12816 1431 aaPredicted RBP12.7□□□□□ -0.38
SEC16A-206ENST00000431893 LIN9Q5TKA1 542 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 FAM227BQ96M60 508 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 LONRF2Q1L5Z9 754 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 CCDC38Q502W7 563 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 DENND2CQ68D51 928 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 NLRP3Q96P20 1036 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 CSRNP2Q9H175 543 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 FAM207AQ9NSI2 230 aaPredicted RBP12.7□□□□□ -0.38
SEC16A-206ENST00000431893 SMIM24O75264 130 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 LDHBP07195 334 aaKnown RBP12.7□□□□□ -0.38
SEC16A-206ENST00000431893 VPS41P49754 854 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 CNNM4Q6P4Q7 775 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 NFATC2IPQ8NCF5 419 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 RBM28Q9NW13 759 aaKnown RBP12.7□□□□□ -0.38
SEC16A-206ENST00000431893 GCNT3O95395 438 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 MAP7Q14244 749 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
SEC16A-206ENST00000431893 CXorf38Q8TB03 319 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 NLRC4Q9NPP4 1024 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 PPME1Q9Y570 386 aa12.7□□□□□ -0.38
SEC16A-206ENST00000431893 NLRP12P59046 1061 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 KIF22Q14807 665 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 CABLES1Q8TDN4 633 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 TRIM35Q9UPQ4 493 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 NCOA1Q15788 1441 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 NPHP3Q7Z494 1330 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 LIG3P49916 1009 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 KRT71Q3SY84 523 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 HS1BP3Q53T59 392 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 PRR16Q569H4 304 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 CMTR1Q8N1G2 835 aaKnown RBP12.69□□□□□ -0.38
SEC16A-206ENST00000431893 ZCRB1Q8TBF4 217 aaKnown RBP12.69□□□□□ -0.38
SEC16A-206ENST00000431893 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
SEC16A-206ENST00000431893 PPP1R12AO14974 1030 aaPredicted RBP12.69□□□□□ -0.38
SEC16A-206ENST00000431893 RPSAP08865 295 aaKnown RBP12.69□□□□□ -0.38
SEC16A-206ENST00000431893 SAT1P21673 171 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 IL1RL1Q01638 556 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 ABCB4P21439 1286 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 SNX14Q9Y5W7 946 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 ZNF202O95125 648 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 MAP2K2P36507 400 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 TIMM10P62072 90 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 COG7P83436 770 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 CEP128Q6ZU80 1094 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 MYCT1Q8N699 235 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 VCXQ9H320 206 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 GNAT2P19087 354 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 TUBB4BP68371 445 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms