RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 TTC14Q96N46 770 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 CNTNAP3BQ96NU0 1288 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 COL25A1Q9BXS0 654 aaPredicted RBP3.3□□□□□ -1.88
LINC00407-201ENST00000426509 CHMP4AQ9BY43 222 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 CNTNAP3Q9BZ76 1288 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 ETNK1Q9HBU6 452 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 ANO2Q9NQ90 1003 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 HYPKQ9NX55 129 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 PA2G4Q9UQ80 394 aaKnown RBP3.3□□□□□ -1.88
LINC00407-201ENST00000426509 AK9Q5TCS8 1911 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 TJP1Q07157 1748 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 WDR90Q96KV7 1748 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 COL5A2P05997 1499 aaPredicted RBP3.29□□□□□ -1.88
LINC00407-201ENST00000426509 NEURL1BA8MQ27 555 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 GRM8O00222 908 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 GLRX3O76003 335 aaKnown RBP3.29□□□□□ -1.88
LINC00407-201ENST00000426509 TATP17735 454 aaPredicted RBP3.29□□□□□ -1.88
LINC00407-201ENST00000426509 POLD1P28340 1107 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 RFX5P48382 616 aaPredicted RBP3.29□□□□□ -1.88
LINC00407-201ENST00000426509 RGS19P49795 217 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 SCNN1DP51172 638 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 CASP7P55210 303 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 ZNF445P59923 1031 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 PTH1RQ03431 593 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 ST3GAL1Q11201 340 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 USP4Q13107 963 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 GAS6Q14393 721 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 DDB1Q16531 1140 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 HSP90AB4PQ58FF6 505 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 WDR44Q5JSH3 913 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 MCTP1Q6DN14 999 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 NBPF10Q6P3W6 841 aaKnown RBP3.29□□□□□ -1.88
LINC00407-201ENST00000426509 ZNF790Q6PG37 636 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 RUFY3Q7L099 469 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 AMIGO3Q86WK7 504 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 CNTROBQ8N137 903 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 NBPF15Q8N660 670 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 XAGE3Q8WTP9 111 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 EAF2Q96CJ1 260 aaPredicted RBP3.29□□□□□ -1.88
LINC00407-201ENST00000426509 INTS4Q96HW7 963 aaKnown RBP3.29□□□□□ -1.88
LINC00407-201ENST00000426509 ZNF496Q96IT1 587 aaPredicted RBP3.29□□□□□ -1.88
LINC00407-201ENST00000426509 NLRP3Q96P20 1036 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 METTL22Q9BUU2 404 aaPredicted RBP3.29□□□□□ -1.88
LINC00407-201ENST00000426509 UPF3BQ9BZI7 483 aaKnown RBP3.29□□□□□ -1.88
LINC00407-201ENST00000426509 BICC1Q9H694 974 aaKnown RBP3.29□□□□□ -1.88
LINC00407-201ENST00000426509 SLC52A2Q9HAB3 445 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 ECHDC1Q9NTX5 307 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 NLRP2Q9NX02 1062 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 KIAA1024Q9UPX6 916 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 THRAP3Q9Y2W1 955 aaKnown RBP3.29□□□□□ -1.88
LINC00407-201ENST00000426509 PCDHGA11Q9Y5H2 935 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 SNX14Q9Y5W7 946 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 UBR2Q8IWV8 1755 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 ARFGEF2Q9Y6D5 1785 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 KCPQ6ZWJ8 1503 aa3.29□□□□□ -1.88
LINC00407-201ENST00000426509 BCL9O00512 1426 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 RGPD3A6NKT7 1758 aaPredicted RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 RGPD4Q7Z3J3 1758 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 MED23Q9ULK4 1368 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 TOGARAM1Q9Y4F4 1720 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 TMEM229AB2RXF0 380 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 GOLGA6L22H0YM25 854 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 PRPF40AO75400 957 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 LARGE1O95461 756 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 DDX58O95786 925 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 MYCP01106 439 aaPredicted RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 SNRPA1P09661 255 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 CPA1P15085 419 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 CLDN10P78369 228 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 MLLT1Q03111 559 aaPredicted RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 AIMP1Q12904 312 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 NMIQ13287 307 aaPredicted RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 OS9Q13438 667 aaPredicted RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 GCKRQ14397 625 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 NECTIN1Q15223 517 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 EML3Q32P44 896 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 MAP7D1Q3KQU3 841 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 ZSCAN23Q3MJ62 389 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 RABL6Q3YEC7 729 aaPredicted RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 CRTC2Q53ET0 693 aaPredicted RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 SLC27A3Q5K4L6 730 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 CAVIN1Q6NZI2 390 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 CWC27Q6UX04 472 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 NOL8Q76FK4 1167 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 SV2AQ7L0J3 742 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 COPS6Q7L5N1 327 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 AACSQ86V21 672 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 ERC1Q8IUD2 1116 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 IFNL2Q8IZJ0 200 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 ZNF295-AS1Q8N0V1 137 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 CLASRPQ8N2M8 674 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 TMEM87AQ8NBN3 555 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 WHAMMQ8TF30 809 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 FOXD4L4Q8WXT5 416 aaPredicted RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 RAPGEF4Q8WZA2 1011 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 PBXIP1Q96AQ6 731 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 ZNF837Q96EG3 531 aaPredicted RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 ZNF594Q96JF6 807 aaPredicted RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 DCAF5Q96JK2 942 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 PPP1R9BQ96SB3 815 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms