RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 ANO2Q9NQ90 1003 aa28.7■■■□□ 2.18
APOE-202ENST00000425718 SIPA1L1O43166 1804 aa28.7■■■□□ 2.18
APOE-202ENST00000425718 TRAF5O00463 557 aa28.69■■■□□ 2.18
APOE-202ENST00000425718 FGAP02671 866 aa28.69■■■□□ 2.18
APOE-202ENST00000425718 MAP3K10Q02779 954 aa28.69■■■□□ 2.18
APOE-202ENST00000425718 NT5C2P49902 561 aa28.68■■■□□ 2.18
APOE-202ENST00000425718 ZNF408Q9H9D4 720 aa28.68■■■□□ 2.18
APOE-202ENST00000425718 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.68■■■□□ 2.18
APOE-202ENST00000425718 GBA2Q9HCG7 927 aaPredicted RBP28.68■■■□□ 2.18
APOE-202ENST00000425718 ROBO3Q96MS0 1386 aa28.67■■■□□ 2.18
APOE-202ENST00000425718 MINDY4BA8MYZ0 360 aa28.67■■■□□ 2.18
APOE-202ENST00000425718 PCP11498 1178 aaKnown RBP28.67■■■□□ 2.18
APOE-202ENST00000425718 TTLL12Q14166 644 aaPredicted RBP28.67■■■□□ 2.18
APOE-202ENST00000425718 IMMTQ16891 758 aaKnown RBP28.67■■■□□ 2.18
APOE-202ENST00000425718 PRAMEF18Q5VWM3 479 aa28.67■■■□□ 2.18
APOE-202ENST00000425718 PDE4BQ07343 736 aa28.66■■■□□ 2.18
APOE-202ENST00000425718 MAP3K11Q16584 847 aa28.66■■■□□ 2.18
APOE-202ENST00000425718 MAP4K1Q92918 833 aa28.66■■■□□ 2.18
APOE-202ENST00000425718 IL25Q9H293 177 aa28.66■■■□□ 2.18
APOE-202ENST00000425718 ANAPC4Q9UJX5 808 aa28.66■■■□□ 2.18
APOE-202ENST00000425718 ZNF213O14771 459 aa28.65■■■□□ 2.18
APOE-202ENST00000425718 FOXP2O15409 715 aa28.65■■■□□ 2.18
APOE-202ENST00000425718 PPARAQ07869 468 aa28.65■■■□□ 2.18
APOE-202ENST00000425718 GINM1Q9NU53 330 aa28.65■■■□□ 2.18
APOE-202ENST00000425718 SSC5DA1L4H1 1573 aa28.65■■■□□ 2.18
APOE-202ENST00000425718 TMEM88BA6NKF7 163 aa28.64■■■□□ 2.18
APOE-202ENST00000425718 PLCD1P51178 756 aa28.64■■■□□ 2.18
APOE-202ENST00000425718 RNF20Q5VTR2 975 aa28.64■■■□□ 2.18
APOE-202ENST00000425718 LSG1Q9H089 658 aaKnown RBP28.64■■■□□ 2.18
APOE-202ENST00000425718 RNF41Q9H4P4 317 aaPredicted RBP28.64■■■□□ 2.18
APOE-202ENST00000425718 GABPAQ06546 454 aa28.63■■■□□ 2.17
APOE-202ENST00000425718 C16orf86Q6ZW13 317 aa28.63■■■□□ 2.17
APOE-202ENST00000425718 ANGEL1Q9UNK9 670 aaKnown RBP28.63■■■□□ 2.17
APOE-202ENST00000425718 ATAD5Q96QE3 1844 aa28.63■■■□□ 2.17
APOE-202ENST00000425718 APLP1P51693 650 aa28.62■■■□□ 2.17
APOE-202ENST00000425718 PTH1RQ03431 593 aa28.62■■■□□ 2.17
APOE-202ENST00000425718 MIGA2Q7L4E1 593 aa28.62■■■□□ 2.17
APOE-202ENST00000425718 CDAN1Q8IWY9 1227 aa28.62■■■□□ 2.17
APOE-202ENST00000425718 ZNF112Q9UJU3 913 aa28.62■■■□□ 2.17
APOE-202ENST00000425718 DOCK1Q14185 1865 aa28.61■■■□□ 2.17
APOE-202ENST00000425718 USP2O75604 605 aaPredicted RBP28.61■■■□□ 2.17
APOE-202ENST00000425718 ANKRD13AQ8IZ07 590 aa28.61■■■□□ 2.17
APOE-202ENST00000425718 KLRG1Q96E93 195 aa28.61■■■□□ 2.17
APOE-202ENST00000425718 CCDC17Q96LX7 622 aa28.61■■■□□ 2.17
APOE-202ENST00000425718 RBM8AQ9Y5S9 174 aaKnown RBP28.61■■■□□ 2.17
APOE-202ENST00000425718 CSADQ9Y600 493 aa28.61■■■□□ 2.17
APOE-202ENST00000425718 OTOFQ9HC10 1997 aa28.61■■■□□ 2.17
APOE-202ENST00000425718 CTNND1O60716 968 aaKnown RBP28.6■■■□□ 2.17
APOE-202ENST00000425718 CYP2D6P10635 497 aa28.6■■■□□ 2.17
APOE-202ENST00000425718 MAP3K9P80192 1104 aa28.6■■■□□ 2.17
APOE-202ENST00000425718 SLC4A8Q2Y0W8 1093 aa28.6■■■□□ 2.17
APOE-202ENST00000425718 CST9Q5W186 159 aa28.6■■■□□ 2.17
APOE-202ENST00000425718 WRNIP1Q96S55 665 aa28.6■■■□□ 2.17
APOE-202ENST00000425718 MKNK2Q9HBH9 465 aa28.6■■■□□ 2.17
APOE-202ENST00000425718 MCCP23508 829 aa28.59■■■□□ 2.17
APOE-202ENST00000425718 CDK8P49336 464 aa28.59■■■□□ 2.17
APOE-202ENST00000425718 TATDN1Q6P1N9 297 aa28.59■■■□□ 2.17
APOE-202ENST00000425718 DLK2Q6UY11 383 aa28.59■■■□□ 2.17
APOE-202ENST00000425718 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.59■■■□□ 2.171e-51■□□□□ 9.2
APOE-202ENST00000425718 CREBZFQ9NS37 354 aa28.59■■■□□ 2.17
APOE-202ENST00000425718 CYP2D7A0A087X1C5 515 aa28.58■■■□□ 2.17
APOE-202ENST00000425718 CERKLQ49MI3 558 aaPredicted RBP28.58■■■□□ 2.17
APOE-202ENST00000425718 HHIPL1Q96JK4 782 aa28.58■■■□□ 2.17
APOE-202ENST00000425718 FMR1Q06787 632 aaKnown RBP eCLIP28.57■■■□□ 2.162e-8■□□□□ 8.9
APOE-202ENST00000425718 PRKG1Q13976 671 aa28.57■■■□□ 2.16
APOE-202ENST00000425718 NOL9Q5SY16 702 aaKnown RBP28.57■■■□□ 2.16
APOE-202ENST00000425718 AKNAD1Q5T1N1 836 aa28.57■■■□□ 2.16
APOE-202ENST00000425718 MFSD6Q6ZSS7 791 aa28.57■■■□□ 2.16
APOE-202ENST00000425718 ZNF444Q8N0Y2 327 aaPredicted RBP28.57■■■□□ 2.16
APOE-202ENST00000425718 STAG1Q8WVM7 1258 aa28.57■■■□□ 2.16
APOE-202ENST00000425718 TBC1D2Q9BYX2 928 aa28.57■■■□□ 2.16
APOE-202ENST00000425718 CNNM2Q9H8M5 875 aa28.57■■■□□ 2.16
APOE-202ENST00000425718 CABP5Q9NP86 173 aa28.57■■■□□ 2.16
APOE-202ENST00000425718 TLL2Q9Y6L7 1015 aa28.57■■■□□ 2.16
APOE-202ENST00000425718 PHF20L1A8MW92 1017 aa28.56■■■□□ 2.16
APOE-202ENST00000425718 ASNSP08243 561 aa28.56■■■□□ 2.16
APOE-202ENST00000425718 ZKSCAN1P17029 563 aaPredicted RBP28.56■■■□□ 2.16
APOE-202ENST00000425718 C8orf34Q49A92 452 aa28.56■■■□□ 2.16
APOE-202ENST00000425718 LDLRAD1Q5T700 205 aa28.56■■■□□ 2.16
APOE-202ENST00000425718 DNAJC18Q9H819 358 aa28.56■■■□□ 2.16
APOE-202ENST00000425718 PICK1Q9NRD5 415 aa28.56■■■□□ 2.16
APOE-202ENST00000425718 ORC4O43929 436 aa28.55■■■□□ 2.16
APOE-202ENST00000425718 SHMT1P34896 483 aa28.55■■■□□ 2.16
APOE-202ENST00000425718 CAP2P40123 477 aa28.55■■■□□ 2.16
APOE-202ENST00000425718 HUNKP57058 714 aa28.55■■■□□ 2.16
APOE-202ENST00000425718 C1QTNF8P60827 252 aa28.55■■■□□ 2.16
APOE-202ENST00000425718 TRDNQ13061 729 aa28.55■■■□□ 2.16
APOE-202ENST00000425718 PPP4R3BQ5MIZ7 849 aa28.55■■■□□ 2.16
APOE-202ENST00000425718 DYNLL2Q96FJ2 89 aa28.55■■■□□ 2.16
APOE-202ENST00000425718 ABT1Q9ULW3 272 aaKnown RBP28.55■■■□□ 2.16
APOE-202ENST00000425718 FGRP09769 529 aa28.54■■■□□ 2.16
APOE-202ENST00000425718 HAND2P61296 217 aa28.54■■■□□ 2.16
APOE-202ENST00000425718 NECTIN1Q15223 517 aa28.54■■■□□ 2.16
APOE-202ENST00000425718 SAPCD2Q86UD0 394 aa28.54■■■□□ 2.16
APOE-202ENST00000425718 SCYL3Q8IZE3 742 aa28.54■■■□□ 2.16
APOE-202ENST00000425718 KRT23Q9C075 422 aa28.54■■■□□ 2.16
APOE-202ENST00000425718 CTDSPL2Q05D32 466 aa28.53■■■□□ 2.16
APOE-202ENST00000425718 KRT32Q14532 448 aa28.53■■■□□ 2.16
APOE-202ENST00000425718 UPF2Q9HAU5 1272 aaKnown RBP28.53■■■□□ 2.16
APOE-202ENST00000425718 FAM196BA6NMK8 535 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms