RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 RNF225M0QZC1 329 aaPredicted RBP12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 PRPF6O94906 941 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 INPP5BP32019 993 aa12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 IRAK1P51617 712 aa12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 TRDNQ13061 729 aa12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 SAMD1Q6SPF0 538 aaPredicted RBP12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 PROSER2Q86WR7 435 aaPredicted RBP12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 CCDC82Q8N4S0 544 aa12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 C19orf44Q9H6X5 657 aa12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 KLF18A0A0U1RQI7 1052 aa12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 GOLGA8BA8MQT2 603 aa12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 AKR1B15C9JRZ8 316 aaPredicted RBP12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 CMA1P23946 247 aa12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 USPL1Q5W0Q7 1092 aa12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 STAMQ92783 540 aa12.82□□□□□ -0.36
SEC61A1-202ENST00000424880 ZNF185O15231 689 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 SKAP2O75563 359 aaPredicted RBP12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 MYL6BP14649 208 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 SF3A3Q12874 501 aaKnown RBP eCLIP12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 MMS19Q96T76 1030 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 LLPHQ9BRT6 129 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 HPCAL4Q9UM19 191 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 CDHR2Q9BYE9 1310 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 ZNF335Q9H4Z2 1342 aaPredicted RBP12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 GOLGA6L9A6NEM1 432 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 MATR3P43243 847 aaKnown RBP eCLIP12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 FXR1P51114 621 aaKnown RBP eCLIP12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 GNGT1P63211 74 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 FCHSD1Q86WN1 690 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 RRP36Q96EU6 259 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 GOLGA6CA6NDK9 693 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 GOLGA6DP0CG33 693 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 EIF5P55010 431 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 STIM1Q13586 685 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 GRIPAP1Q4V328 841 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 GBP6Q6ZN66 633 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 TACO1Q9BSH4 297 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 POLR3EQ9NVU0 708 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 GOLGA6AQ9NYA3 693 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 SALL1Q9NSC2 1324 aa12.81□□□□□ -0.36
SEC61A1-202ENST00000424880 EIF4A1P60842 406 aaKnown RBP12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 USP49Q70CQ1 688 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 PPFIBP1Q86W92 1011 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 CEP57Q86XR8 500 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 SH2D3CQ8N5H7 860 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 PSMB7Q99436 277 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 CRACR2AQ9BSW2 395 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 MYL10Q9BUA6 226 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 TUBE1Q9UJT0 475 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 AGPSO00116 658 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 POLR2DO15514 142 aaKnown RBP12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 AFMP43652 599 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 TIMM10P62072 90 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 PDCLQ13371 301 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 EEF2KMTQ96G04 330 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 NBPF3Q9H094 633 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 SNRKQ9NRH2 765 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 KCNH3Q9ULD8 1083 aa12.8□□□□□ -0.36
SEC61A1-202ENST00000424880 GRM8O00222 908 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 PAX7P23759 505 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 EXOSC10Q01780 885 aaKnown RBP12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 CCDC102BQ68D86 513 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 FAM76AQ8TAV0 307 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 NAPGQ99747 312 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 MAN1B1Q9UKM7 699 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 MYO6Q9UM54 1294 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 USP54Q70EL1 1684 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 KIF23Q02241 960 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 EZH2Q15910 746 aaKnown RBP12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 RNF187Q5TA31 235 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 VPS37DQ86XT2 251 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 GIMAP7Q8NHV1 300 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 YEATS4O95619 227 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 CCDC148Q8NFR7 591 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 HDAC7Q8WUI4 952 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 SERTAD1Q9UHV2 236 aa12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 HOOK1Q9UJC3 728 aaKnown RBP12.79□□□□□ -0.36
SEC61A1-202ENST00000424880 HSPD1P10809 573 aaKnown RBP12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 SLC7A5Q01650 507 aa12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 SLC39A14Q15043 492 aa12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 N4BP2L2Q92802 583 aaPredicted RBP12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 DDX17Q92841 729 aaKnown RBP12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 CHP1Q99653 195 aa12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 NFAT5O94916 1531 aa12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 BTBD11A6QL63 1104 aa12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 PES1O00541 588 aaKnown RBP12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 ATP2C2O75185 946 aa12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 NEBLO76041 1014 aa12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 PPARAQ07869 468 aa12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 NBPF20Q3BBV1 942 aa12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 CAPS2Q9BXY5 557 aa12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 A1CFQ9NQ94 594 aaKnown RBP12.78□□□□□ -0.36
SEC61A1-202ENST00000424880 NDUFAB1O14561 156 aa12.77□□□□□ -0.36
SEC61A1-202ENST00000424880 C21orf2O43822 256 aa12.77□□□□□ -0.36
SEC61A1-202ENST00000424880 ATP1A1P05023 1023 aaKnown RBP12.77□□□□□ -0.36
SEC61A1-202ENST00000424880 ERVK-24P63145 666 aa12.77□□□□□ -0.36
SEC61A1-202ENST00000424880 IP6K1Q92551 441 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms