RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 IMMTQ16891 758 aaKnown RBP15.26■□□□□ 0.03
ATG4B-208ENST00000419606 LDHDQ86WU2 507 aa15.26■□□□□ 0.03
ATG4B-208ENST00000419606 SULF1Q8IWU6 871 aa15.26■□□□□ 0.03
ATG4B-208ENST00000419606 ZNF784Q8NCA9 323 aaPredicted RBP15.26■□□□□ 0.03
ATG4B-208ENST00000419606 CSRNP1Q96S65 589 aa15.26■□□□□ 0.03
ATG4B-208ENST00000419606 DNAJC18Q9H819 358 aa15.26■□□□□ 0.03
ATG4B-208ENST00000419606 CTNNA3Q9UI47 895 aa15.26■□□□□ 0.03
ATG4B-208ENST00000419606 ANAPC4Q9UJX5 808 aa15.26■□□□□ 0.03
ATG4B-208ENST00000419606 SSC5DA1L4H1 1573 aa15.26■□□□□ 0.03
ATG4B-208ENST00000419606 ADCK5Q3MIX3 580 aa15.25■□□□□ 0.03
ATG4B-208ENST00000419606 MIGA2Q7L4E1 593 aa15.25■□□□□ 0.03
ATG4B-208ENST00000419606 TTC6Q86TZ1 520 aa15.25■□□□□ 0.03
ATG4B-208ENST00000419606 KCNB2Q92953 911 aa15.25■□□□□ 0.03
ATG4B-208ENST00000419606 DHX36Q9H2U1 1008 aaKnown RBP15.25■□□□□ 0.03
ATG4B-208ENST00000419606 SNX14Q9Y5W7 946 aa15.25■□□□□ 0.03
ATG4B-208ENST00000419606 ROBO3Q96MS0 1386 aa15.24■□□□□ 0.03
ATG4B-208ENST00000419606 NEDD4P46934 1319 aa15.24■□□□□ 0.03
ATG4B-208ENST00000419606 E7EWF7 191 aa15.24■□□□□ 0.03
ATG4B-208ENST00000419606 EPB41L2O43491 1005 aaKnown RBP15.24■□□□□ 0.03
ATG4B-208ENST00000419606 PRDM1O75626 825 aa15.24■□□□□ 0.03
ATG4B-208ENST00000419606 HLA-DOAP06340 250 aa15.24■□□□□ 0.03
ATG4B-208ENST00000419606 GABPAQ06546 454 aa15.24■□□□□ 0.03
ATG4B-208ENST00000419606 SHROOM1Q2M3G4 852 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-208ENST00000419606 CDCA5Q96FF9 252 aa15.24■□□□□ 0.03
ATG4B-208ENST00000419606 C22orf23Q9BZE7 217 aa15.24■□□□□ 0.03
ATG4B-208ENST00000419606 PI4KBQ9UBF8 816 aa15.24■□□□□ 0.03
ATG4B-208ENST00000419606 CDK8P49336 464 aa15.23■□□□□ 0.03
ATG4B-208ENST00000419606 PRKG1Q13976 671 aa15.23■□□□□ 0.03
ATG4B-208ENST00000419606 RRP1BQ14684 758 aaKnown RBP15.23■□□□□ 0.03
ATG4B-208ENST00000419606 CHADLQ6NUI6 762 aa15.23■□□□□ 0.03
ATG4B-208ENST00000419606 C16orf86Q6ZW13 317 aa15.23■□□□□ 0.03
ATG4B-208ENST00000419606 CDC37L1Q7L3B6 337 aa15.23■□□□□ 0.03
ATG4B-208ENST00000419606 METTL16Q86W50 562 aaKnown RBP15.23■□□□□ 0.03
ATG4B-208ENST00000419606 AMOTL1Q8IY63 956 aa15.23■□□□□ 0.03
ATG4B-208ENST00000419606 SERPINB13Q9UIV8 391 aa15.23■□□□□ 0.03
ATG4B-208ENST00000419606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.23■□□□□ 0.03
ATG4B-208ENST00000419606 PPP2R3BQ9Y5P8 575 aa15.23■□□□□ 0.03
ATG4B-208ENST00000419606 MYH8P13535 1937 aa15.22■□□□□ 0.03
ATG4B-208ENST00000419606 EIF5BO60841 1220 aaKnown RBP15.22■□□□□ 0.03
ATG4B-208ENST00000419606 CPA1P15085 419 aa15.22■□□□□ 0.03
ATG4B-208ENST00000419606 SHMT1P34896 483 aa15.22■□□□□ 0.03
ATG4B-208ENST00000419606 AKNAD1Q5T1N1 836 aa15.22■□□□□ 0.03
ATG4B-208ENST00000419606 FOXP4Q8IVH2 680 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-208ENST00000419606 CRACR2BQ8N4Y2 399 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-208ENST00000419606 STAG1Q8WVM7 1258 aa15.22■□□□□ 0.03
ATG4B-208ENST00000419606 TBC1D32Q96NH3 1257 aa15.22■□□□□ 0.03
ATG4B-208ENST00000419606 EHD4Q9H223 541 aa15.22■□□□□ 0.03
ATG4B-208ENST00000419606 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.22■□□□□ 0.03
ATG4B-208ENST00000419606 ITGBL1O95965 494 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-208ENST00000419606 FGRP09769 529 aa15.21■□□□□ 0.03
ATG4B-208ENST00000419606 RASA1P20936 1047 aa15.21■□□□□ 0.03
ATG4B-208ENST00000419606 MCCP23508 829 aa15.21■□□□□ 0.03
ATG4B-208ENST00000419606 RBM25P49756 843 aaKnown RBP15.21■□□□□ 0.03
ATG4B-208ENST00000419606 JAG1P78504 1218 aa15.21■□□□□ 0.03
ATG4B-208ENST00000419606 RRP12Q5JTH9 1297 aaKnown RBP15.21■□□□□ 0.03
ATG4B-208ENST00000419606 RNF20Q5VTR2 975 aa15.21■□□□□ 0.03
ATG4B-208ENST00000419606 MOB2Q70IA6 237 aa15.21■□□□□ 0.03
ATG4B-208ENST00000419606 KIF2CQ99661 725 aa15.21■□□□□ 0.03
ATG4B-208ENST00000419606 B4E1Z4 1266 aa15.2■□□□□ 0.02
ATG4B-208ENST00000419606 MAP3K10Q02779 954 aa15.2■□□□□ 0.02
ATG4B-208ENST00000419606 TSGA10IPQ3SY00 556 aa15.2■□□□□ 0.02
ATG4B-208ENST00000419606 FAM47AQ5JRC9 791 aa15.2■□□□□ 0.02
ATG4B-208ENST00000419606 TATDN1Q6P1N9 297 aa15.2■□□□□ 0.02
ATG4B-208ENST00000419606 MFSD6Q6ZSS7 791 aa15.2■□□□□ 0.02
ATG4B-208ENST00000419606 CYB5R4Q7L1T6 521 aa15.2■□□□□ 0.02
ATG4B-208ENST00000419606 ZNF408Q9H9D4 720 aa15.2■□□□□ 0.02
ATG4B-208ENST00000419606 UPF2Q9HAU5 1272 aaKnown RBP15.2■□□□□ 0.02
ATG4B-208ENST00000419606 TOMM22Q9NS69 142 aa15.2■□□□□ 0.02
ATG4B-208ENST00000419606 PHF20L1A8MW92 1017 aa15.19■□□□□ 0.02
ATG4B-208ENST00000419606 TBC1D12O60347 775 aa15.19■□□□□ 0.02
ATG4B-208ENST00000419606 USP2O75604 605 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-208ENST00000419606 GDF11O95390 407 aa15.19■□□□□ 0.02
ATG4B-208ENST00000419606 SLC3A2P08195 630 aaKnown RBP15.19■□□□□ 0.02
ATG4B-208ENST00000419606 AKR1B1P15121 316 aa15.19■□□□□ 0.02
ATG4B-208ENST00000419606 ZKSCAN1P17029 563 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-208ENST00000419606 PDE4BQ07343 736 aa15.19■□□□□ 0.02
ATG4B-208ENST00000419606 SUPT20HL1Q3ZLR7 823 aa15.19■□□□□ 0.02
ATG4B-208ENST00000419606 CHST3Q7LGC8 479 aa15.19■□□□□ 0.02
ATG4B-208ENST00000419606 JAKMIP1Q96N16 626 aaKnown RBP15.19■□□□□ 0.02
ATG4B-208ENST00000419606 TRIM34Q9BYJ4 488 aa15.19■□□□□ 0.02
ATG4B-208ENST00000419606 MKNK2Q9HBH9 465 aa15.19■□□□□ 0.02
ATG4B-208ENST00000419606 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-208ENST00000419606 SWAP70Q9UH65 585 aa15.19■□□□□ 0.02
ATG4B-208ENST00000419606 HERC5Q9UII4 1024 aaKnown RBP15.19■□□□□ 0.02
ATG4B-208ENST00000419606 PAPPA2Q9BXP8 1791 aa15.19■□□□□ 0.02
ATG4B-208ENST00000419606 OTOFQ9HC10 1997 aa15.18■□□□□ 0.02
ATG4B-208ENST00000419606 ATAD5Q96QE3 1844 aa15.18■□□□□ 0.02
ATG4B-208ENST00000419606 ORC4O43929 436 aa15.18■□□□□ 0.02
ATG4B-208ENST00000419606 KDM4AO75164 1064 aa15.18■□□□□ 0.02
ATG4B-208ENST00000419606 INPP5BP32019 993 aa15.18■□□□□ 0.02
ATG4B-208ENST00000419606 ANTXR2P58335 489 aa15.18■□□□□ 0.02
ATG4B-208ENST00000419606 TCEANC2Q96MN5 208 aa15.18■□□□□ 0.02
ATG4B-208ENST00000419606 RNF41Q9H4P4 317 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-208ENST00000419606 RANBP6O60518 1105 aaKnown RBP15.17■□□□□ 0.02
ATG4B-208ENST00000419606 ANAPC15P60006 121 aa15.17■□□□□ 0.02
ATG4B-208ENST00000419606 TFAP4Q01664 338 aa15.17■□□□□ 0.02
ATG4B-208ENST00000419606 CERKLQ49MI3 558 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-208ENST00000419606 MB21D2Q8IYB1 491 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-208ENST00000419606 NCOA7Q8NI08 942 aa15.17■□□□□ 0.02
ATG4B-208ENST00000419606 IL17RAQ96F46 866 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 262.7 ms