RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SAP30BPQ9UHR5 308 aaKnown RBP17.22■□□□□ 0.35
SGCE-202ENST00000415788 SCAF8Q9UPN6 1271 aaKnown RBP17.22■□□□□ 0.35
SGCE-202ENST00000415788 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
SGCE-202ENST00000415788 DDTLA6NHG4 134 aaPredicted RBP17.22■□□□□ 0.35
SGCE-202ENST00000415788 NF2P35240 595 aa17.22■□□□□ 0.35
SGCE-202ENST00000415788 SH3BP5LQ7L8J4 393 aa17.22■□□□□ 0.35
SGCE-202ENST00000415788 C22orf23Q9BZE7 217 aa17.22■□□□□ 0.35
SGCE-202ENST00000415788 EHD4Q9H223 541 aa17.22■□□□□ 0.35
SGCE-202ENST00000415788 FSTL1Q12841 308 aa17.21■□□□□ 0.35
SGCE-202ENST00000415788 C12orf60Q5U649 245 aa17.21■□□□□ 0.35
SGCE-202ENST00000415788 FOXP4Q8IVH2 680 aaPredicted RBP17.21■□□□□ 0.35
SGCE-202ENST00000415788 CDCA5Q96FF9 252 aa17.21■□□□□ 0.35
SGCE-202ENST00000415788 DDX60LQ5H9U9 1706 aaKnown RBP17.2■□□□□ 0.34
SGCE-202ENST00000415788 ITGBL1O95965 494 aaPredicted RBP17.2■□□□□ 0.34
SGCE-202ENST00000415788 PTH1RQ03431 593 aa17.2■□□□□ 0.34
SGCE-202ENST00000415788 HERC5Q9UII4 1024 aaKnown RBP17.2■□□□□ 0.34
SGCE-202ENST00000415788 TBC1D12O60347 775 aa17.2■□□□□ 0.34
SGCE-202ENST00000415788 SLC3A2P08195 630 aaKnown RBP17.2■□□□□ 0.34
SGCE-202ENST00000415788 GLIPR1L2Q4G1C9 344 aa17.2■□□□□ 0.34
SGCE-202ENST00000415788 NBPF12Q5TAG4 269 aaPredicted RBP17.2■□□□□ 0.34
SGCE-202ENST00000415788 DCAF15Q66K64 600 aa17.2■□□□□ 0.34
SGCE-202ENST00000415788 METTL16Q86W50 562 aaKnown RBP17.2■□□□□ 0.34
SGCE-202ENST00000415788 SERPINB13Q9UIV8 391 aa17.2■□□□□ 0.34
SGCE-202ENST00000415788 CDK5RAP2Q96SN8 1893 aa17.2■□□□□ 0.34
SGCE-202ENST00000415788 NAV1Q8NEY1 1877 aa17.19■□□□□ 0.34
SGCE-202ENST00000415788 TRAK2O60296 914 aa17.19■□□□□ 0.34
SGCE-202ENST00000415788 PLCD1P51178 756 aa17.19■□□□□ 0.34
SGCE-202ENST00000415788 IMMTQ16891 758 aaKnown RBP17.19■□□□□ 0.34
SGCE-202ENST00000415788 TRIM34Q9BYJ4 488 aa17.19■□□□□ 0.34
SGCE-202ENST00000415788 ANAPC4Q9UJX5 808 aa17.19■□□□□ 0.34
SGCE-202ENST00000415788 ROBO3Q96MS0 1386 aa17.19■□□□□ 0.34
SGCE-202ENST00000415788 MINDY4BA8MYZ0 360 aa17.18■□□□□ 0.34
SGCE-202ENST00000415788 ZNF213O14771 459 aa17.18■□□□□ 0.34
SGCE-202ENST00000415788 PTMSP20962 102 aa17.18■□□□□ 0.34
SGCE-202ENST00000415788 MAP3K10Q02779 954 aa17.18■□□□□ 0.34
SGCE-202ENST00000415788 PPARAQ07869 468 aa17.18■□□□□ 0.34
SGCE-202ENST00000415788 PRAMEF18Q5VWM3 479 aa17.18■□□□□ 0.34
SGCE-202ENST00000415788 CDAN1Q8IWY9 1227 aa17.18■□□□□ 0.34
SGCE-202ENST00000415788 CRACR2BQ8N4Y2 399 aaPredicted RBP17.18■□□□□ 0.34
SGCE-202ENST00000415788 ZNF287Q9HBT7 754 aa17.18■□□□□ 0.34
SGCE-202ENST00000415788 SWAP70Q9UH65 585 aa17.18■□□□□ 0.34
SGCE-202ENST00000415788 RBM8AQ9Y5S9 174 aaKnown RBP17.18■□□□□ 0.34
SGCE-202ENST00000415788 TRAF5O00463 557 aa17.18■□□□□ 0.34
SGCE-202ENST00000415788 CYP2D6P10635 497 aa17.18■□□□□ 0.34
SGCE-202ENST00000415788 HSCBQ8IWL3 235 aa17.18■□□□□ 0.34
SGCE-202ENST00000415788 PPP1R12BO60237 982 aaPredicted RBP17.17■□□□□ 0.34
SGCE-202ENST00000415788 PCP11498 1178 aaKnown RBP17.17■□□□□ 0.34
SGCE-202ENST00000415788 GABPAQ06546 454 aa17.17■□□□□ 0.34
SGCE-202ENST00000415788 SLC4A8Q2Y0W8 1093 aa17.17■□□□□ 0.34
SGCE-202ENST00000415788 RNF20Q5VTR2 975 aa17.17■□□□□ 0.34
SGCE-202ENST00000415788 PASKQ96RG2 1323 aa17.16■□□□□ 0.34
SGCE-202ENST00000415788 CYP2D7A0A087X1C5 515 aa17.16■□□□□ 0.34
SGCE-202ENST00000415788 FKBP1BP68106 108 aa17.16■□□□□ 0.34
SGCE-202ENST00000415788 C16orf86Q6ZW13 317 aa17.16■□□□□ 0.34
SGCE-202ENST00000415788 ZNF341Q9BYN7 854 aa17.16■□□□□ 0.34
SGCE-202ENST00000415788 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.16■□□□□ 0.34
SGCE-202ENST00000415788 NT5C2P49902 561 aa17.16■□□□□ 0.34
SGCE-202ENST00000415788 PDE4BQ07343 736 aa17.16■□□□□ 0.34
SGCE-202ENST00000415788 NECTIN1Q15223 517 aa17.16■□□□□ 0.34
SGCE-202ENST00000415788 DLK2Q6UY11 383 aa17.16■□□□□ 0.34
SGCE-202ENST00000415788 USP26Q9BXU7 913 aa17.16■□□□□ 0.34
SGCE-202ENST00000415788 RNF41Q9H4P4 317 aaPredicted RBP17.16■□□□□ 0.34
SGCE-202ENST00000415788 CIZ1Q9ULV3 898 aaPredicted RBP17.16■□□□□ 0.34
SGCE-202ENST00000415788 MYH1P12882 1939 aa17.16■□□□□ 0.34
SGCE-202ENST00000415788 SSC5DA1L4H1 1573 aa17.15■□□□□ 0.34
SGCE-202ENST00000415788 MIGA2Q7L4E1 593 aa17.15■□□□□ 0.34
SGCE-202ENST00000415788 SNX21Q969T3 373 aa17.15■□□□□ 0.34
SGCE-202ENST00000415788 POLR2AP24928 1970 aaKnown RBP17.15■□□□□ 0.34
SGCE-202ENST00000415788 CELF2O95319 508 aaKnown RBP17.14■□□□□ 0.33
SGCE-202ENST00000415788 MCCP23508 829 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 HAND2P61296 217 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 ARMC9Q7Z3E5 817 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 STAG1Q8WVM7 1258 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 DNAJC18Q9H819 358 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 ZNF408Q9H9D4 720 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 BAZ2AQ9UIF9 1905 aaKnown RBP17.14■□□□□ 0.33
SGCE-202ENST00000415788 UNCXA6NJT0 531 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 CYP21A2P08686 494 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 FGRP09769 529 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 HSPA4P34932 840 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 IREB2P48200 963 aaKnown RBP17.14■□□□□ 0.33
SGCE-202ENST00000415788 CDK8P49336 464 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 MAP3K11Q16584 847 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 AKNAD1Q5T1N1 836 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 CREB3L3Q68CJ9 461 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 TATDN1Q6P1N9 297 aa17.14■□□□□ 0.33
SGCE-202ENST00000415788 ZKSCAN1P17029 563 aaPredicted RBP17.13■□□□□ 0.33
SGCE-202ENST00000415788 EVX2Q03828 476 aa17.13■□□□□ 0.33
SGCE-202ENST00000415788 CTDSPL2Q05D32 466 aa17.13■□□□□ 0.33
SGCE-202ENST00000415788 MFSD6Q6ZSS7 791 aa17.13■□□□□ 0.33
SGCE-202ENST00000415788 C2orf69Q8N8R5 385 aa17.13■□□□□ 0.33
SGCE-202ENST00000415788 KLRG1Q96E93 195 aa17.13■□□□□ 0.33
SGCE-202ENST00000415788 DYNLL2Q96FJ2 89 aa17.13■□□□□ 0.33
SGCE-202ENST00000415788 GRPEL1Q9HAV7 217 aa17.13■□□□□ 0.33
SGCE-202ENST00000415788 MKNK2Q9HBH9 465 aa17.13■□□□□ 0.33
SGCE-202ENST00000415788 GBA2Q9HCG7 927 aaPredicted RBP17.13■□□□□ 0.33
SGCE-202ENST00000415788 ZNF112Q9UJU3 913 aa17.13■□□□□ 0.33
SGCE-202ENST00000415788 LAMB1P07942 1786 aa17.13■□□□□ 0.33
SGCE-202ENST00000415788 SLC27A2O14975 620 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 USP2O75604 605 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms