RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 IBSPP21815 317 aaPredicted RBP5.9□□□□□ -1.47
HERC4-205ENST00000412272 PTPN14Q15678 1187 aa5.9□□□□□ -1.47
HERC4-205ENST00000412272 PPP1R15BQ5SWA1 713 aa5.9□□□□□ -1.47
HERC4-205ENST00000412272 SEPT14Q6ZU15 432 aa5.9□□□□□ -1.47
HERC4-205ENST00000412272 BRAPQ7Z569 592 aa5.9□□□□□ -1.47
HERC4-205ENST00000412272 USP48Q86UV5 1035 aa5.9□□□□□ -1.47
HERC4-205ENST00000412272 CNNM3Q8NE01 707 aa5.9□□□□□ -1.47
HERC4-205ENST00000412272 TRIM58Q8NG06 486 aa5.9□□□□□ -1.47
HERC4-205ENST00000412272 HNRNPLLQ8WVV9 542 aaKnown RBP5.9□□□□□ -1.47
HERC4-205ENST00000412272 RBM33Q96EV2 1170 aaKnown RBP5.9□□□□□ -1.47
HERC4-205ENST00000412272 VMP1Q96GC9 406 aa5.9□□□□□ -1.47
HERC4-205ENST00000412272 GPATCH3Q96I76 525 aa5.9□□□□□ -1.47
HERC4-205ENST00000412272 TRPC6Q9Y210 931 aa5.9□□□□□ -1.47
HERC4-205ENST00000412272 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.9□□□□□ -1.47
HERC4-205ENST00000412272 TCHHQ07283 1943 aa5.9□□□□□ -1.47
HERC4-205ENST00000412272 CDC42BPBQ9Y5S2 1711 aa5.9□□□□□ -1.47
HERC4-205ENST00000412272 GLI2P10070 1586 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 TRAPPC8Q9Y2L5 1435 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 CCDC194A0A1B0GVG4 234 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 GOLGA6L10A6NI86 522 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 LIN7AO14910 233 aaPredicted RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 SRGAP3O43295 1099 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 LDHAP00338 332 aaKnown RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 DESP17661 470 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 HOXD12P35452 270 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 SMTNP53814 917 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 PLOD1Q02809 727 aaPredicted RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 ITIH3Q06033 890 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 APOBRQ0VD83 1088 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 CBX3Q13185 183 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 RABL6Q3YEC7 729 aaPredicted RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 NUGGCQ68CJ6 796 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 THOC7Q6I9Y2 204 aaKnown RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 BPHLQ86WA6 291 aaPredicted RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 RNF168Q8IYW5 571 aaPredicted RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 SMARCC2Q8TAQ2 1214 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 KLHDC4Q8TBB5 520 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 RUNDC1Q96C34 613 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 DHTKD1Q96HY7 919 aaPredicted RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 CDCA7Q9BWT1 371 aaPredicted RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 PREBQ9HCU5 417 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 GALNT8Q9NY28 637 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 IFT140Q96RY7 1462 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 ABCC3O15438 1527 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 NUTM2FA1L443 756 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 TBKBP1A7MCY6 615 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 EFCAB8A8MWE9 144 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 HMGB1P1B2RPK0 211 aaPredicted RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 CYP1A2P05177 515 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 EZRP15311 586 aaKnown RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 ENDOUP21128 410 aaKnown RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 MATR3P43243 847 aaKnown RBP eCLIP5.89□□□□□ -1.479e-6■■■■□ 23
HERC4-205ENST00000412272 CCT8P50990 548 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 CYP4A11Q02928 519 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 ARHGEF25Q86VW2 580 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 LRRC8AQ8IWT6 810 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 WHAMMQ8TF30 809 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 HVCN1Q96D96 273 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 MPHOSPH6Q99547 160 aaKnown RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 C2orf49Q9BVC5 232 aaPredicted RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 LRRCC1Q9C099 1032 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 OCEL1Q9H607 264 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 AATFQ9NY61 560 aaKnown RBP eCLIP5.89□□□□□ -1.47
HERC4-205ENST00000412272 GABBR1Q9UBS5 961 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 SSX2IPQ9Y2D8 614 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 EFR3BQ9Y2G0 817 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 FAN1Q9Y2M0 1017 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 TTC41PQ6P2S7 1318 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 MYH15Q9Y2K3 1946 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 TADA3O75528 432 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 PDHBP11177 359 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 GBP2P32456 591 aaPredicted RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 CLK1P49759 484 aaKnown RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 NEK2P51955 445 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 EVA1CP58658 441 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 ZNF804AQ7Z570 1209 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 DCLK2Q8N568 766 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 DDX12PQ92771 950 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 ATP6V0A2Q9Y487 856 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 TTLL3Q9Y4R7 772 aa5.89□□□□□ -1.47
HERC4-205ENST00000412272 GPATCH8Q9UKJ3 1502 aaKnown RBP5.89□□□□□ -1.47
HERC4-205ENST00000412272 KIF3BO15066 747 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 SLC26A4O43511 780 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 CCDC192P0DO97 292 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 INTS3Q68E01 1043 aaKnown RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 CCSAPQ6IQ19 270 aaPredicted RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 CCAR2Q8N163 923 aaKnown RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 CEP112Q8N8E3 955 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 MPP4Q96JB8 637 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 SENP7Q9BQF6 1050 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 TPCN1Q9ULQ1 816 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 TNNQ9UQP3 1299 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 PRELID1Q9Y255 219 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 IFT172Q9UG01 1749 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 P4HA2O15460 535 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 FOXD2O60548 495 aaPredicted RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 N4BP1O75113 896 aaKnown RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 MTA2O94776 668 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 PENKP01210 267 aaPredicted RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 AMPHP49418 695 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms