RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 IFT20Q8IY31 132 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 FAM177A1Q8N128 213 aaPredicted RBP3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 CNPY4Q8N129 248 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 GPATCH11Q8N954 259 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 IGSF22Q8N9C0 903 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 TC2NQ8N9U0 490 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 PRPF38AQ8NAV1 312 aaKnown RBP3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 NGDNQ8NEJ9 315 aaKnown RBP3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 TRIM58Q8NG06 486 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 CAGE1Q8TC20 777 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 BCAS4Q8TDM0 211 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 EAF2Q96CJ1 260 aaPredicted RBP3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 RSRC1Q96IZ7 334 aaKnown RBP3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 FAM227BQ96M60 508 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 DRC1Q96MC2 740 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 PSMD1Q99460 953 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 EYA1Q99502 592 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 PLCD4Q9BRC7 762 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 FOXP1Q9H334 677 aaPredicted RBP3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 BOLA2Q9H3K6 86 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 GOLPH3LQ9H4A5 285 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 VEZTQ9HBM0 779 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 ABCB6Q9NP58 842 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 GNL3LQ9NVN8 582 aaKnown RBP3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 FANCLQ9NW38 375 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 MAGEC2Q9UBF1 373 aaPredicted RBP3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 FAN1Q9Y2M0 1017 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 MAP3K2Q9Y2U5 619 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 NFE2L3Q9Y4A8 694 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 ADGRG1Q9Y653 693 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 EID1Q9Y6B2 187 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 FAM169AQ9Y6X4 670 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 FPGT-TNNI3KV9GXZ4 949 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 DLG5Q8TDM6 1919 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 MRC1P22897 1456 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 DIP2CQ9Y2E4 1556 aa3.2□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZMYM6O95789 1325 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ERBB3P21860 1342 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 NFAT5O94916 1531 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 A0A0D9SFI3 127 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 KLF18A0A0U1RQI7 1052 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 BICDL2A1A5D9 508 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 GOLGA8BA8MQT2 603 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 N4BP3O15049 544 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZBTB22O15209 634 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 JAK2O60674 1132 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 SASH1O94885 1247 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 LUC7L3O95232 432 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 DEXIO95424 95 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CALM1P0DP23 149 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CALM2P0DP24 149 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CALM3P0DP25 149 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 PCP11498 1178 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CPA1P15085 419 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 GCFC2P16383 781 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 EIF2S2P20042 333 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 PTPREP23469 700 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 HNRNPH1P31943 449 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 PDE6BP35913 854 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 TRAPPC10P48553 1259 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 SARSP49591 514 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 DNM2P50570 870 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 METAP2P50579 478 aaKnown RBP eCLIP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 SARNPP82979 210 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CDK17Q00537 523 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 KIF23Q02241 960 aaPredicted RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 SSRP1Q08945 709 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 PAK2Q13177 524 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 BIRC3Q13489 604 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 MTMR3Q13615 1198 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 MORC3Q14149 939 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 SNCBQ16143 134 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 IFI16Q16666 785 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 RABL6Q3YEC7 729 aaPredicted RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 FIGNQ5HY92 759 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 SPDYCQ5MJ68 293 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZMYM1Q5SVZ6 1142 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CEP85LQ5SZL2 805 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 LRCH2Q5VUJ6 765 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 PAPD7Q5XG87 772 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 PPP4R3AQ6IN85 833 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CCNI2Q6ZMN8 369 aaPredicted RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CCDC121Q6ZUS5 278 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZNF572Q7Z3I7 529 aaPredicted RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CCDC84Q86UT8 332 aaPredicted RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 PACS2Q86VP3 889 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 TMEM139Q8IV31 216 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CD302Q8IX05 232 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 TEX11Q8IYF3 940 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 MMGT1Q8N4V1 131 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 RNF10Q8N5U6 811 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ANKS4BQ8N8V4 417 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 IL17REQ8NFR9 667 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 OR8K1Q8NGG5 319 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 SPATA20Q8TB22 786 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 WHAMMQ8TF30 809 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CAVIN3Q969G5 261 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 LRRC45Q96CN5 670 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 HOOK2Q96ED9 719 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZFP91Q96JP5 570 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms