RNA–Protein interactions for RNA: ENST00000404276.5

CHEK2-208, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,785 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-208ENST00000404276 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
CHEK2-208ENST00000404276 TNNI2P48788 182 aa12.35□□□□□ -0.43
CHEK2-208ENST00000404276 ZSCAN29Q8IWY8 852 aaPredicted RBP12.35□□□□□ -0.43
CHEK2-208ENST00000404276 DYNLL2Q96FJ2 89 aa12.35□□□□□ -0.43
CHEK2-208ENST00000404276 CSRNP1Q96S65 589 aa12.35□□□□□ -0.43
CHEK2-208ENST00000404276 EHD4Q9H223 541 aa12.35□□□□□ -0.43
CHEK2-208ENST00000404276 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
CHEK2-208ENST00000404276 PI4KBQ9UBF8 816 aa12.35□□□□□ -0.43
CHEK2-208ENST00000404276 SERPINB13Q9UIV8 391 aa12.35□□□□□ -0.43
CHEK2-208ENST00000404276 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHEK2-208ENST00000404276 NEDD4P46934 1319 aa12.34□□□□□ -0.43
CHEK2-208ENST00000404276 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
CHEK2-208ENST00000404276 POTEJP0CG39 1038 aa12.34□□□□□ -0.43
CHEK2-208ENST00000404276 KRT32Q14532 448 aa12.34□□□□□ -0.43
CHEK2-208ENST00000404276 EAPPQ56P03 285 aaPredicted RBP12.34□□□□□ -0.43
CHEK2-208ENST00000404276 C16orf86Q6ZW13 317 aa12.34□□□□□ -0.43
CHEK2-208ENST00000404276 SLC44A5Q8NCS7 719 aa12.34□□□□□ -0.43
CHEK2-208ENST00000404276 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
CHEK2-208ENST00000404276 ZNF526Q8TF50 670 aaPredicted RBP12.34□□□□□ -0.43
CHEK2-208ENST00000404276 TM6SF1Q9BZW5 370 aa12.34□□□□□ -0.43
CHEK2-208ENST00000404276 DNAJC18Q9H819 358 aa12.34□□□□□ -0.43
CHEK2-208ENST00000404276 HLA-DOAP06340 250 aa12.33□□□□□ -0.44
CHEK2-208ENST00000404276 SLURP2P0DP57 97 aa12.33□□□□□ -0.44
CHEK2-208ENST00000404276 PCP11498 1178 aaKnown RBP12.33□□□□□ -0.44
CHEK2-208ENST00000404276 MFSD6Q6ZSS7 791 aa12.33□□□□□ -0.44
CHEK2-208ENST00000404276 STK11IPQ8N1F8 1099 aa12.33□□□□□ -0.44
CHEK2-208ENST00000404276 DCPSQ96C86 337 aaKnown RBP12.33□□□□□ -0.44
CHEK2-208ENST00000404276 JAKMIP1Q96N16 626 aaKnown RBP12.33□□□□□ -0.44
CHEK2-208ENST00000404276 RNF41Q9H4P4 317 aaPredicted RBP12.33□□□□□ -0.44
CHEK2-208ENST00000404276 ORC4O43929 436 aa12.33□□□□□ -0.44
CHEK2-208ENST00000404276 PRDM1O75626 825 aa12.33□□□□□ -0.44
CHEK2-208ENST00000404276 SLC3A2P08195 630 aaKnown RBP12.33□□□□□ -0.44
CHEK2-208ENST00000404276 CDK8P49336 464 aa12.33□□□□□ -0.44
CHEK2-208ENST00000404276 MAP3K10Q02779 954 aa12.33□□□□□ -0.44
CHEK2-208ENST00000404276 FOXP4Q8IVH2 680 aaPredicted RBP12.33□□□□□ -0.44
CHEK2-208ENST00000404276 NEK1Q96PY6 1258 aa12.33□□□□□ -0.44
CHEK2-208ENST00000404276 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
CHEK2-208ENST00000404276 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
CHEK2-208ENST00000404276 PPP2R3BQ9Y5P8 575 aa12.33□□□□□ -0.44
CHEK2-208ENST00000404276 CASTP20810 708 aaKnown RBP12.32□□□□□ -0.44
CHEK2-208ENST00000404276 SHMT1P34896 483 aa12.32□□□□□ -0.44
CHEK2-208ENST00000404276 PDE4BQ07343 736 aa12.32□□□□□ -0.44
CHEK2-208ENST00000404276 KRT26Q7Z3Y9 468 aa12.32□□□□□ -0.44
CHEK2-208ENST00000404276 SULF1Q8IWU6 871 aa12.32□□□□□ -0.44
CHEK2-208ENST00000404276 MB21D2Q8IYB1 491 aaPredicted RBP12.32□□□□□ -0.44
CHEK2-208ENST00000404276 NCOA7Q8NI08 942 aa12.32□□□□□ -0.44
CHEK2-208ENST00000404276 UPF3BQ9BZI7 483 aaKnown RBP12.32□□□□□ -0.44
CHEK2-208ENST00000404276 CNNM2Q9H8M5 875 aa12.32□□□□□ -0.44
CHEK2-208ENST00000404276 FAM196BA6NMK8 535 aa12.31□□□□□ -0.44
CHEK2-208ENST00000404276 B4E1Z4 1266 aa12.31□□□□□ -0.44
CHEK2-208ENST00000404276 ADM5C9JUS6 153 aa12.31□□□□□ -0.44
CHEK2-208ENST00000404276 TBC1D12O60347 775 aa12.31□□□□□ -0.44
CHEK2-208ENST00000404276 CPA1P15085 419 aa12.31□□□□□ -0.44
CHEK2-208ENST00000404276 RASA1P20936 1047 aa12.31□□□□□ -0.44
CHEK2-208ENST00000404276 PSMA5P28066 241 aa12.31□□□□□ -0.44
CHEK2-208ENST00000404276 TRDNQ13061 729 aa12.31□□□□□ -0.44
CHEK2-208ENST00000404276 NBPF12Q5TAG4 269 aaPredicted RBP12.31□□□□□ -0.44
CHEK2-208ENST00000404276 PRAMEF18Q5VWM3 479 aa12.31□□□□□ -0.44
CHEK2-208ENST00000404276 DLK2Q6UY11 383 aa12.31□□□□□ -0.44
CHEK2-208ENST00000404276 KRT23Q9C075 422 aa12.31□□□□□ -0.44
CHEK2-208ENST00000404276 SWAP70Q9UH65 585 aa12.31□□□□□ -0.44
CHEK2-208ENST00000404276 HERC5Q9UII4 1024 aaKnown RBP12.31□□□□□ -0.44
CHEK2-208ENST00000404276 KDM4AO75164 1064 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 HMGB1P09429 215 aaKnown RBP12.3□□□□□ -0.44
CHEK2-208ENST00000404276 EXOSC10Q01780 885 aaKnown RBP12.3□□□□□ -0.44
CHEK2-208ENST00000404276 RABEP1Q15276 862 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 TATDN1Q6P1N9 297 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 RUFY3Q7L099 469 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 RALYLQ86SE5 291 aaKnown RBP12.3□□□□□ -0.44
CHEK2-208ENST00000404276 CRACR2BQ8N4Y2 399 aaPredicted RBP12.3□□□□□ -0.44
CHEK2-208ENST00000404276 MKNK2Q9HBH9 465 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 ZNF287Q9HBT7 754 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 ZSWIM5Q9P217 1185 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 SSC5DA1L4H1 1573 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 MYH8P13535 1937 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 RPS6KB1P23443 525 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 NT5C2P49902 561 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 ANTXR2P58335 489 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 RRP12Q5JTH9 1297 aaKnown RBP12.3□□□□□ -0.44
CHEK2-208ENST00000404276 MAP1SQ66K74 1059 aaPredicted RBP12.3□□□□□ -0.44
CHEK2-208ENST00000404276 BLOC1S2Q6QNY1 142 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 CYB5R4Q7L1T6 521 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 CDC37L1Q7L3B6 337 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 DHX32Q7L7V1 743 aaKnown RBP12.3□□□□□ -0.44
CHEK2-208ENST00000404276 LDHDQ86WU2 507 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 ESR2Q92731 530 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 GLIS2Q9BZE0 524 aaPredicted RBP12.3□□□□□ -0.44
CHEK2-208ENST00000404276 TOMM22Q9NS69 142 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 CYP46A1Q9Y6A2 500 aa12.3□□□□□ -0.44
CHEK2-208ENST00000404276 RANBP6O60518 1105 aaKnown RBP12.29□□□□□ -0.44
CHEK2-208ENST00000404276 MCM5P33992 734 aa12.29□□□□□ -0.44
CHEK2-208ENST00000404276 NEK4P51957 841 aa12.29□□□□□ -0.44
CHEK2-208ENST00000404276 MIGA2Q7L4E1 593 aa12.29□□□□□ -0.44
CHEK2-208ENST00000404276 CHST3Q7LGC8 479 aa12.29□□□□□ -0.44
CHEK2-208ENST00000404276 USP48Q86UV5 1035 aa12.29□□□□□ -0.44
CHEK2-208ENST00000404276 TCEANC2Q96MN5 208 aa12.29□□□□□ -0.44
CHEK2-208ENST00000404276 TTC14Q96N46 770 aa12.29□□□□□ -0.44
CHEK2-208ENST00000404276 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.29□□□□□ -0.44
CHEK2-208ENST00000404276 GPBP1L1Q9HC44 474 aaPredicted RBP12.29□□□□□ -0.44
CHEK2-208ENST00000404276 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms