RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 RTKN2Q8IZC4 609 aa11.94□□□□□ -0.5
TUBB-208ENST00000396389 TIGD1Q96MW7 591 aa11.94□□□□□ -0.5
TUBB-208ENST00000396389 PUS7LQ9H0K6 701 aaKnown RBP11.94□□□□□ -0.5
TUBB-208ENST00000396389 PAXBP1Q9Y5B6 917 aa11.94□□□□□ -0.5
TUBB-208ENST00000396389 NRXN2Q9P2S2 1712 aa11.94□□□□□ -0.5
TUBB-208ENST00000396389 UQCRFS1P1P0C7P4 283 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 ARID4AP29374 1257 aaPredicted RBP11.93□□□□□ -0.5
TUBB-208ENST00000396389 ERCC6LQ2NKX8 1250 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 VPS53Q5VIR6 699 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 CERS5Q8N5B7 392 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 TPCN1Q9ULQ1 816 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 ZNF532Q9HCE3 1301 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 APPP05067 770 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 SKILP12757 684 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 PTPN14Q15678 1187 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 DZIP1Q86YF9 867 aaKnown RBP11.93□□□□□ -0.5
TUBB-208ENST00000396389 LRRC8AQ8IWT6 810 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 KBTBD3Q8NAB2 608 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 ZNF397Q8NF99 534 aaPredicted RBP11.93□□□□□ -0.5
TUBB-208ENST00000396389 JDP2Q8WYK2 163 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 EYA3Q99504 573 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 CACNB3P54284 484 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 ZNF526Q8TF50 670 aaPredicted RBP11.93□□□□□ -0.5
TUBB-208ENST00000396389 OSBP2Q969R2 916 aa11.93□□□□□ -0.5
TUBB-208ENST00000396389 AATFQ9NY61 560 aaKnown RBP eCLIP11.93□□□□□ -0.5
TUBB-208ENST00000396389 CYP7A1P22680 504 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 IARSP41252 1262 aaKnown RBP11.92□□□□□ -0.5
TUBB-208ENST00000396389 HNRNPH2P55795 449 aaKnown RBP11.92□□□□□ -0.5
TUBB-208ENST00000396389 DYNLL1P63167 89 aaKnown RBP11.92□□□□□ -0.5
TUBB-208ENST00000396389 KRT85P78386 507 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 MECOMQ03112 1051 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 TMC4Q7Z404 712 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 BICD2Q8TD16 824 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 TAF6LQ9Y6J9 622 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 IRS2Q9Y4H2 1338 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 M0R2C6 588 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 POLR3GO15318 223 aaPredicted RBP11.92□□□□□ -0.5
TUBB-208ENST00000396389 C11orf57Q6ZUT1 292 aaPredicted RBP11.92□□□□□ -0.5
TUBB-208ENST00000396389 NIM1KQ8IY84 436 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 TDRD7Q8NHU6 1098 aaKnown RBP11.92□□□□□ -0.5
TUBB-208ENST00000396389 ZNF384Q8TF68 577 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 PGBD1Q96JS3 809 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 SPATA32Q96LK8 384 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 TRIM34Q9BYJ4 488 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 ARMT1Q9H993 441 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 RNF181Q9P0P0 153 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 DENND2AQ9ULE3 1009 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 LRP5O75197 1615 aa11.92□□□□□ -0.5
TUBB-208ENST00000396389 PSMD14O00487 310 aa11.91□□□□□ -0.5
TUBB-208ENST00000396389 PRKAB2O43741 272 aa11.91□□□□□ -0.5
TUBB-208ENST00000396389 PDE6AP16499 860 aa11.91□□□□□ -0.5
TUBB-208ENST00000396389 TTF2Q9UNY4 1162 aaKnown RBP11.91□□□□□ -0.5
TUBB-208ENST00000396389 CCDC66A2RUB6 948 aa11.91□□□□□ -0.5
TUBB-208ENST00000396389 SMIM22K7EJ46 135 aa11.91□□□□□ -0.5
TUBB-208ENST00000396389 LDHBP07195 334 aaKnown RBP11.91□□□□□ -0.5
TUBB-208ENST00000396389 MAP3K12Q12852 859 aa11.91□□□□□ -0.5
TUBB-208ENST00000396389 SYCP1Q15431 976 aa11.91□□□□□ -0.5
TUBB-208ENST00000396389 SDR42E1Q8WUS8 393 aa11.91□□□□□ -0.5
TUBB-208ENST00000396389 CEP350Q5VT06 3117 aa11.91□□□□□ -0.5
TUBB-208ENST00000396389 QSER1Q2KHR3 1735 aa11.9□□□□□ -0.5
TUBB-208ENST00000396389 COA1Q9GZY4 146 aa11.9□□□□□ -0.5
TUBB-208ENST00000396389 MED23Q9ULK4 1368 aa11.9□□□□□ -0.5
TUBB-208ENST00000396389 DUOX1Q9NRD9 1551 aa11.9□□□□□ -0.5
TUBB-208ENST00000396389 MBD4O95243 580 aa11.9□□□□□ -0.5
TUBB-208ENST00000396389 HAND2P61296 217 aa11.9□□□□□ -0.5
TUBB-208ENST00000396389 CXCL9Q07325 125 aa11.9□□□□□ -0.5
TUBB-208ENST00000396389 NAA16Q6N069 864 aaPredicted RBP11.9□□□□□ -0.5
TUBB-208ENST00000396389 NEK11Q8NG66 645 aa11.9□□□□□ -0.5
TUBB-208ENST00000396389 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.5
TUBB-208ENST00000396389 EPC1Q9H2F5 836 aa11.9□□□□□ -0.5
TUBB-208ENST00000396389 ZCCHC17Q9NP64 241 aaKnown RBP11.9□□□□□ -0.5
TUBB-208ENST00000396389 CCDC69A6NI79 296 aa11.9□□□□□ -0.51
TUBB-208ENST00000396389 EVX2Q03828 476 aa11.9□□□□□ -0.51
TUBB-208ENST00000396389 LEO1Q8WVC0 666 aaPredicted RBP11.9□□□□□ -0.51
TUBB-208ENST00000396389 NOL10Q9BSC4 688 aaKnown RBP11.9□□□□□ -0.51
TUBB-208ENST00000396389 COL4A5P29400 1685 aa11.9□□□□□ -0.51
TUBB-208ENST00000396389 AOX1Q06278 1338 aa11.89□□□□□ -0.51
TUBB-208ENST00000396389 RNF113AO15541 343 aaKnown RBP11.89□□□□□ -0.51
TUBB-208ENST00000396389 SLURP2P0DP57 97 aa11.89□□□□□ -0.51
TUBB-208ENST00000396389 AIDAQ96BJ3 306 aa11.89□□□□□ -0.51
TUBB-208ENST00000396389 CYP46A1Q9Y6A2 500 aa11.89□□□□□ -0.51
TUBB-208ENST00000396389 EGFRP00533 1210 aa11.89□□□□□ -0.51
TUBB-208ENST00000396389 IL1R1P14778 569 aa11.89□□□□□ -0.51
TUBB-208ENST00000396389 PICALMQ13492 652 aa11.89□□□□□ -0.51
TUBB-208ENST00000396389 GRIPAP1Q4V328 841 aa11.89□□□□□ -0.51
TUBB-208ENST00000396389 C9orf131Q5VYM1 1079 aa11.89□□□□□ -0.51
TUBB-208ENST00000396389 LCORLQ8N3X6 602 aa11.89□□□□□ -0.51
TUBB-208ENST00000396389 IL17RAQ96F46 866 aa11.89□□□□□ -0.51
TUBB-208ENST00000396389 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.89□□□□□ -0.512e-10■□□□□ 10.2
TUBB-208ENST00000396389 MAST3O60307 1309 aa11.88□□□□□ -0.51
TUBB-208ENST00000396389 ZNF541Q9H0D2 1346 aa11.88□□□□□ -0.51
TUBB-208ENST00000396389 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
TUBB-208ENST00000396389 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
TUBB-208ENST00000396389 JAK2O60674 1132 aa11.88□□□□□ -0.51
TUBB-208ENST00000396389 NYAP1Q6ZVC0 841 aa11.88□□□□□ -0.51
TUBB-208ENST00000396389 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
TUBB-208ENST00000396389 CHMP4CQ96CF2 233 aa11.88□□□□□ -0.51
TUBB-208ENST00000396389 CLSTN2Q9H4D0 955 aa11.88□□□□□ -0.51
TUBB-208ENST00000396389 CLRN2A0PK11 232 aa11.88□□□□□ -0.51
TUBB-208ENST00000396389 GOLGA6L19H0YKK7 550 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms