RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 DCAF15Q66K64 600 aa23.02■■□□□ 1.28
PSEN1-203ENST00000394157 CDCA5Q96FF9 252 aa23.02■■□□□ 1.28
PSEN1-203ENST00000394157 SERPINB13Q9UIV8 391 aa23.02■■□□□ 1.28
PSEN1-203ENST00000394157 SCAF8Q9UPN6 1271 aaKnown RBP23.02■■□□□ 1.28
PSEN1-203ENST00000394157 ROBO3Q96MS0 1386 aa23.01■■□□□ 1.27
PSEN1-203ENST00000394157 ZNF213O14771 459 aa23.01■■□□□ 1.27
PSEN1-203ENST00000394157 MAP3K10Q02779 954 aa23.01■■□□□ 1.27
PSEN1-203ENST00000394157 PPARAQ07869 468 aa23.01■■□□□ 1.27
PSEN1-203ENST00000394157 FSTL1Q12841 308 aa23.01■■□□□ 1.27
PSEN1-203ENST00000394157 ZNF287Q9HBT7 754 aa23.01■■□□□ 1.27
PSEN1-203ENST00000394157 RBM8AQ9Y5S9 174 aaKnown RBP23.01■■□□□ 1.27
PSEN1-203ENST00000394157 LAMB1P07942 1786 aa23.01■■□□□ 1.27
PSEN1-203ENST00000394157 MINDY4BA8MYZ0 360 aa23■■□□□ 1.27
PSEN1-203ENST00000394157 ITGBL1O95965 494 aaPredicted RBP23■■□□□ 1.27
PSEN1-203ENST00000394157 PCP11498 1178 aaKnown RBP23■■□□□ 1.27
PSEN1-203ENST00000394157 PLCD1P51178 756 aa23■■□□□ 1.27
PSEN1-203ENST00000394157 NBPF12Q5TAG4 269 aaPredicted RBP23■■□□□ 1.27
PSEN1-203ENST00000394157 RNF20Q5VTR2 975 aa23■■□□□ 1.27
PSEN1-203ENST00000394157 SWAP70Q9UH65 585 aa23■■□□□ 1.27
PSEN1-203ENST00000394157 NT5C2P49902 561 aa22.99■■□□□ 1.27
PSEN1-203ENST00000394157 NECTIN1Q15223 517 aa22.99■■□□□ 1.27
PSEN1-203ENST00000394157 CRACR2BQ8N4Y2 399 aaPredicted RBP22.99■■□□□ 1.27
PSEN1-203ENST00000394157 USP26Q9BXU7 913 aa22.99■■□□□ 1.27
PSEN1-203ENST00000394157 TRIM34Q9BYJ4 488 aa22.99■■□□□ 1.27
PSEN1-203ENST00000394157 CYP2D6P10635 497 aa22.98■■□□□ 1.27
PSEN1-203ENST00000394157 GABPAQ06546 454 aa22.98■■□□□ 1.27
PSEN1-203ENST00000394157 BACH2Q9BYV9 841 aa22.98■■□□□ 1.27
PSEN1-203ENST00000394157 RNF41Q9H4P4 317 aaPredicted RBP22.98■■□□□ 1.27
PSEN1-203ENST00000394157 LAMA4Q16363 1823 aa22.98■■□□□ 1.27
PSEN1-203ENST00000394157 CYP2D7A0A087X1C5 515 aa22.97■■□□□ 1.27
PSEN1-203ENST00000394157 PPP1R12BO60237 982 aaPredicted RBP22.97■■□□□ 1.27
PSEN1-203ENST00000394157 MCCP23508 829 aa22.97■■□□□ 1.27
PSEN1-203ENST00000394157 PDE4BQ07343 736 aa22.97■■□□□ 1.27
PSEN1-203ENST00000394157 C16orf86Q6ZW13 317 aa22.97■■□□□ 1.27
PSEN1-203ENST00000394157 CDAN1Q8IWY9 1227 aa22.97■■□□□ 1.27
PSEN1-203ENST00000394157 FKBP1BP68106 108 aa22.96■■□□□ 1.27
PSEN1-203ENST00000394157 PRAMEF18Q5VWM3 479 aa22.96■■□□□ 1.27
PSEN1-203ENST00000394157 ZNF341Q9BYN7 854 aa22.96■■□□□ 1.27
PSEN1-203ENST00000394157 UPF2Q9HAU5 1272 aaKnown RBP22.96■■□□□ 1.27
PSEN1-203ENST00000394157 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.96■■□□□ 1.27
PSEN1-203ENST00000394157 SIPA1L1O43166 1804 aa22.96■■□□□ 1.27
PSEN1-203ENST00000394157 SSC5DA1L4H1 1573 aa22.95■■□□□ 1.26
PSEN1-203ENST00000394157 TRAF5O00463 557 aa22.95■■□□□ 1.26
PSEN1-203ENST00000394157 CYP21A2P08686 494 aa22.95■■□□□ 1.26
PSEN1-203ENST00000394157 FGRP09769 529 aa22.95■■□□□ 1.26
PSEN1-203ENST00000394157 ZKSCAN1P17029 563 aaPredicted RBP22.95■■□□□ 1.26
PSEN1-203ENST00000394157 HSPA4P34932 840 aa22.95■■□□□ 1.26
PSEN1-203ENST00000394157 SLC4A8Q2Y0W8 1093 aa22.95■■□□□ 1.26
PSEN1-203ENST00000394157 AKNAD1Q5T1N1 836 aa22.95■■□□□ 1.26
PSEN1-203ENST00000394157 CREB3L3Q68CJ9 461 aa22.95■■□□□ 1.26
PSEN1-203ENST00000394157 STAG1Q8WVM7 1258 aa22.95■■□□□ 1.26
PSEN1-203ENST00000394157 PASKQ96RG2 1323 aa22.95■■□□□ 1.26
PSEN1-203ENST00000394157 UNCXA6NJT0 531 aa22.94■■□□□ 1.26
PSEN1-203ENST00000394157 SLC27A2O14975 620 aa22.94■■□□□ 1.26
PSEN1-203ENST00000394157 SEC24BO95487 1268 aa22.94■■□□□ 1.26
PSEN1-203ENST00000394157 CDK8P49336 464 aa22.94■■□□□ 1.26
PSEN1-203ENST00000394157 HAND2P61296 217 aa22.94■■□□□ 1.26
PSEN1-203ENST00000394157 TSGA10IPQ3SY00 556 aa22.94■■□□□ 1.26
PSEN1-203ENST00000394157 TATDN1Q6P1N9 297 aa22.94■■□□□ 1.26
PSEN1-203ENST00000394157 MFSD6Q6ZSS7 791 aa22.94■■□□□ 1.26
PSEN1-203ENST00000394157 KCNB2Q92953 911 aa22.94■■□□□ 1.26
PSEN1-203ENST00000394157 ORC4O43929 436 aa22.93■■□□□ 1.26
PSEN1-203ENST00000394157 IREB2P48200 963 aaKnown RBP22.93■■□□□ 1.26
PSEN1-203ENST00000394157 CTDSPL2Q05D32 466 aa22.93■■□□□ 1.26
PSEN1-203ENST00000394157 MAP3K11Q16584 847 aa22.93■■□□□ 1.26
PSEN1-203ENST00000394157 DLK2Q6UY11 383 aa22.93■■□□□ 1.26
PSEN1-203ENST00000394157 MIGA2Q7L4E1 593 aa22.93■■□□□ 1.26
PSEN1-203ENST00000394157 ARMC9Q7Z3E5 817 aa22.93■■□□□ 1.26
PSEN1-203ENST00000394157 DYNLL2Q96FJ2 89 aa22.93■■□□□ 1.26
PSEN1-203ENST00000394157 DNAJC18Q9H819 358 aa22.93■■□□□ 1.26
PSEN1-203ENST00000394157 CNNM2Q9H8M5 875 aa22.93■■□□□ 1.26
PSEN1-203ENST00000394157 MKNK2Q9HBH9 465 aa22.93■■□□□ 1.26
PSEN1-203ENST00000394157 ZNF112Q9UJU3 913 aa22.93■■□□□ 1.26
PSEN1-203ENST00000394157 TRPM7Q96QT4 1865 aa22.92■■□□□ 1.26
PSEN1-203ENST00000394157 SHMT1P34896 483 aa22.92■■□□□ 1.26
PSEN1-203ENST00000394157 KRT32Q14532 448 aa22.92■■□□□ 1.26
PSEN1-203ENST00000394157 CCDC17Q96LX7 622 aa22.92■■□□□ 1.26
PSEN1-203ENST00000394157 NBPF3Q9H094 633 aa22.92■■□□□ 1.26
PSEN1-203ENST00000394157 GINM1Q9NU53 330 aa22.92■■□□□ 1.26
PSEN1-203ENST00000394157 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.92■■□□□ 1.26
PSEN1-203ENST00000394157 PAPPA2Q9BXP8 1791 aa22.91■■□□□ 1.26
PSEN1-203ENST00000394157 PHF20L1A8MW92 1017 aa22.91■■□□□ 1.26
PSEN1-203ENST00000394157 CELF2O95319 508 aaKnown RBP22.91■■□□□ 1.26
PSEN1-203ENST00000394157 EVX2Q03828 476 aa22.91■■□□□ 1.26
PSEN1-203ENST00000394157 TBC1D10CQ8IV04 446 aa22.91■■□□□ 1.26
PSEN1-203ENST00000394157 C2orf69Q8N8R5 385 aa22.91■■□□□ 1.26
PSEN1-203ENST00000394157 KLRG1Q96E93 195 aa22.91■■□□□ 1.26
PSEN1-203ENST00000394157 KRT23Q9C075 422 aa22.91■■□□□ 1.26
PSEN1-203ENST00000394157 CTNND1O60716 968 aaKnown RBP22.9■■□□□ 1.26
PSEN1-203ENST00000394157 USP2O75604 605 aaPredicted RBP22.9■■□□□ 1.26
PSEN1-203ENST00000394157 ANAPC15P60006 121 aa22.9■■□□□ 1.26
PSEN1-203ENST00000394157 TRDNQ13061 729 aa22.9■■□□□ 1.26
PSEN1-203ENST00000394157 CERKLQ49MI3 558 aaPredicted RBP22.9■■□□□ 1.26
PSEN1-203ENST00000394157 ZNF444Q8N0Y2 327 aaPredicted RBP22.9■■□□□ 1.26
PSEN1-203ENST00000394157 GBA2Q9HCG7 927 aaPredicted RBP22.9■■□□□ 1.26
PSEN1-203ENST00000394157 E7EWF7 191 aa22.89■■□□□ 1.25
PSEN1-203ENST00000394157 SMIM22K7EJ46 135 aa22.89■■□□□ 1.25
PSEN1-203ENST00000394157 TTLL12Q14166 644 aaPredicted RBP22.89■■□□□ 1.25
PSEN1-203ENST00000394157 SLC44A5Q8NCS7 719 aa22.89■■□□□ 1.25
PSEN1-203ENST00000394157 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms