RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.72■■■□□ 2.19
LRFN4-202ENST00000393952 GLTPD2A6NH11 291 aa28.71■■■□□ 2.19
LRFN4-202ENST00000393952 PRDM1O75626 825 aa28.71■■■□□ 2.19
LRFN4-202ENST00000393952 FGRP09769 529 aa28.71■■■□□ 2.19
LRFN4-202ENST00000393952 L3MBTL3Q96JM7 780 aaPredicted RBP28.71■■■□□ 2.19
LRFN4-202ENST00000393952 KRT23Q9C075 422 aa28.71■■■□□ 2.19
LRFN4-202ENST00000393952 CNTNAP1P78357 1384 aa28.71■■■□□ 2.19
LRFN4-202ENST00000393952 SIPA1L1O43166 1804 aa28.71■■■□□ 2.19
LRFN4-202ENST00000393952 DDTLA6NHG4 134 aaPredicted RBP28.71■■■□□ 2.19
LRFN4-202ENST00000393952 EXOSC10Q01780 885 aaKnown RBP28.71■■■□□ 2.19
LRFN4-202ENST00000393952 CHST3Q7LGC8 479 aa28.71■■■□□ 2.19
LRFN4-202ENST00000393952 ZSCAN29Q8IWY8 852 aaPredicted RBP28.71■■■□□ 2.19
LRFN4-202ENST00000393952 TBC1D2Q9BYX2 928 aa28.71■■■□□ 2.19
LRFN4-202ENST00000393952 PCP11498 1178 aaKnown RBP28.7■■■□□ 2.18
LRFN4-202ENST00000393952 SLC44A5Q8NCS7 719 aa28.7■■■□□ 2.18
LRFN4-202ENST00000393952 DHX36Q9H2U1 1008 aaKnown RBP28.7■■■□□ 2.18
LRFN4-202ENST00000393952 COL2A1P02458 1487 aaPredicted RBP28.7■■■□□ 2.18
LRFN4-202ENST00000393952 DCAF8L1A6NGE4 600 aa28.69■■■□□ 2.18
LRFN4-202ENST00000393952 ORC4O43929 436 aa28.69■■■□□ 2.18
LRFN4-202ENST00000393952 KDM4AO75164 1064 aa28.69■■■□□ 2.18
LRFN4-202ENST00000393952 HLA-DOAP06340 250 aa28.69■■■□□ 2.18
LRFN4-202ENST00000393952 HIRAP54198 1017 aaPredicted RBP28.69■■■□□ 2.18
LRFN4-202ENST00000393952 ANTXR2P58335 489 aa28.69■■■□□ 2.18
LRFN4-202ENST00000393952 PDE4BQ07343 736 aa28.69■■■□□ 2.18
LRFN4-202ENST00000393952 CYB5R4Q7L1T6 521 aa28.69■■■□□ 2.18
LRFN4-202ENST00000393952 FAM151AQ8WW52 585 aa28.69■■■□□ 2.18
LRFN4-202ENST00000393952 LRRC2Q9BYS8 371 aa28.69■■■□□ 2.18
LRFN4-202ENST00000393952 ADARB2Q9NS39 739 aaKnown RBP28.69■■■□□ 2.18
LRFN4-202ENST00000393952 HACL1Q9UJ83 578 aa28.69■■■□□ 2.18
LRFN4-202ENST00000393952 ATRNL1Q5VV63 1379 aa28.68■■■□□ 2.18
LRFN4-202ENST00000393952 PRC1O43663 620 aa28.68■■■□□ 2.18
LRFN4-202ENST00000393952 MCM5P33992 734 aa28.68■■■□□ 2.18
LRFN4-202ENST00000393952 AK2P54819 239 aa28.68■■■□□ 2.18
LRFN4-202ENST00000393952 C16orf86Q6ZW13 317 aa28.68■■■□□ 2.18
LRFN4-202ENST00000393952 HSCBQ8IWL3 235 aa28.68■■■□□ 2.18
LRFN4-202ENST00000393952 IL27Q8NEV9 243 aa28.68■■■□□ 2.18
LRFN4-202ENST00000393952 NOL8Q76FK4 1167 aaKnown RBP28.67■■■□□ 2.18
LRFN4-202ENST00000393952 FAM83AQ86UY5 434 aa28.67■■■□□ 2.18
LRFN4-202ENST00000393952 SCAF8Q9UPN6 1271 aaKnown RBP28.67■■■□□ 2.18
LRFN4-202ENST00000393952 GABPAQ06546 454 aa28.67■■■□□ 2.18
LRFN4-202ENST00000393952 ZSWIM5Q9P217 1185 aa28.67■■■□□ 2.18
LRFN4-202ENST00000393952 RANBP6O60518 1105 aaKnown RBP28.66■■■□□ 2.18
LRFN4-202ENST00000393952 CDK8P49336 464 aa28.66■■■□□ 2.18
LRFN4-202ENST00000393952 BECN1Q14457 450 aa28.66■■■□□ 2.18
LRFN4-202ENST00000393952 Q6ZUG5 572 aa28.66■■■□□ 2.18
LRFN4-202ENST00000393952 ESR2Q92731 530 aa28.66■■■□□ 2.18
LRFN4-202ENST00000393952 TMEM39BQ9GZU3 492 aa28.66■■■□□ 2.18
LRFN4-202ENST00000393952 ALDH8A1Q9H2A2 487 aaPredicted RBP28.66■■■□□ 2.18
LRFN4-202ENST00000393952 MKNK2Q9HBH9 465 aa28.66■■■□□ 2.18
LRFN4-202ENST00000393952 PI4KBQ9UBF8 816 aa28.66■■■□□ 2.18
LRFN4-202ENST00000393952 SERPINB13Q9UIV8 391 aa28.66■■■□□ 2.18
LRFN4-202ENST00000393952 WDR19Q8NEZ3 1342 aa28.65■■■□□ 2.18
LRFN4-202ENST00000393952 TOB2Q14106 344 aaPredicted RBP28.65■■■□□ 2.18
LRFN4-202ENST00000393952 LARP6Q9BRS8 491 aaKnown RBP28.65■■■□□ 2.18
LRFN4-202ENST00000393952 EHD4Q9H223 541 aa28.65■■■□□ 2.18
LRFN4-202ENST00000393952 MYH8P13535 1937 aa28.65■■■□□ 2.18
LRFN4-202ENST00000393952 SLURP2P0DP57 97 aa28.64■■■□□ 2.18
LRFN4-202ENST00000393952 TNNI2P48788 182 aa28.64■■■□□ 2.18
LRFN4-202ENST00000393952 ANGEL2Q5VTE6 544 aaKnown RBP28.64■■■□□ 2.18
LRFN4-202ENST00000393952 IPO9Q96P70 1041 aaKnown RBP28.64■■■□□ 2.18
LRFN4-202ENST00000393952 SCN4AP35499 1836 aa28.63■■■□□ 2.17
LRFN4-202ENST00000393952 TNFAIP1Q13829 316 aa28.63■■■□□ 2.17
LRFN4-202ENST00000393952 RASA3Q14644 834 aa28.63■■■□□ 2.17
LRFN4-202ENST00000393952 CDAN1Q8IWY9 1227 aa28.63■■■□□ 2.17
LRFN4-202ENST00000393952 CSRNP1Q96S65 589 aa28.63■■■□□ 2.17
LRFN4-202ENST00000393952 GPHNQ9NQX3 736 aaPredicted RBP28.63■■■□□ 2.17
LRFN4-202ENST00000393952 GGA3Q9NZ52 723 aa28.63■■■□□ 2.17
LRFN4-202ENST00000393952 WDR90Q96KV7 1748 aa28.63■■■□□ 2.17
LRFN4-202ENST00000393952 RASA1P20936 1047 aa28.62■■■□□ 2.17
LRFN4-202ENST00000393952 SLC4A3P48751 1232 aa28.62■■■□□ 2.17
LRFN4-202ENST00000393952 MCM2P49736 904 aa28.62■■■□□ 2.17
LRFN4-202ENST00000393952 FGD1P98174 961 aa28.62■■■□□ 2.17
LRFN4-202ENST00000393952 FAM47AQ5JRC9 791 aa28.62■■■□□ 2.17
LRFN4-202ENST00000393952 ZNF287Q9HBT7 754 aa28.62■■■□□ 2.17
LRFN4-202ENST00000393952 FAM196BA6NMK8 535 aa28.62■■■□□ 2.17
LRFN4-202ENST00000393952 K7ELQ4 463 aaPredicted RBP28.62■■■□□ 2.17
LRFN4-202ENST00000393952 CRACR2BQ8N4Y2 399 aaPredicted RBP28.62■■■□□ 2.17
LRFN4-202ENST00000393952 DNAJC18Q9H819 358 aa28.62■■■□□ 2.17
LRFN4-202ENST00000393952 PGAP2Q9UHJ9 254 aa28.62■■■□□ 2.17
LRFN4-202ENST00000393952 EPHX2P34913 555 aa28.61■■■□□ 2.17
LRFN4-202ENST00000393952 ANKRD1Q15327 319 aa28.61■■■□□ 2.17
LRFN4-202ENST00000393952 APOBEC3FQ8IUX4 373 aaKnown RBP28.61■■■□□ 2.17
LRFN4-202ENST00000393952 BRF1Q92994 677 aa28.61■■■□□ 2.17
LRFN4-202ENST00000393952 ZKSCAN3Q9BRR0 538 aa28.61■■■□□ 2.17
LRFN4-202ENST00000393952 SWAP70Q9UH65 585 aa28.61■■■□□ 2.17
LRFN4-202ENST00000393952 POLR2AP24928 1970 aaKnown RBP28.6■■■□□ 2.17
LRFN4-202ENST00000393952 SHMT1P34896 483 aa28.6■■■□□ 2.17
LRFN4-202ENST00000393952 FOXP4Q8IVH2 680 aaPredicted RBP28.6■■■□□ 2.17
LRFN4-202ENST00000393952 ZNF444Q8N0Y2 327 aaPredicted RBP28.6■■■□□ 2.17
LRFN4-202ENST00000393952 AGXT2Q9BYV1 514 aa28.6■■■□□ 2.17
LRFN4-202ENST00000393952 TSPY2A6NKD2 308 aa28.59■■■□□ 2.17
LRFN4-202ENST00000393952 POTECB2RU33 542 aa28.59■■■□□ 2.17
LRFN4-202ENST00000393952 TFAP4Q01664 338 aa28.59■■■□□ 2.17
LRFN4-202ENST00000393952 METTL16Q86W50 562 aaKnown RBP28.59■■■□□ 2.17
LRFN4-202ENST00000393952 FBXL16Q8N461 479 aa28.59■■■□□ 2.17
LRFN4-202ENST00000393952 TMEM87BQ96K49 555 aa28.59■■■□□ 2.17
LRFN4-202ENST00000393952 DEFB129Q9H1M3 183 aa28.59■■■□□ 2.17
LRFN4-202ENST00000393952 LIMCH1Q9UPQ0 1083 aa28.59■■■□□ 2.17
LRFN4-202ENST00000393952 SH2B2O14492 632 aaPredicted RBP28.58■■■□□ 2.17
LRFN4-202ENST00000393952 IFIT3O14879 490 aaKnown RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms