RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 RASGRP2Q7LDG7 609 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 CCDC148Q8NFR7 591 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 LINS1Q8NG48 757 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 KLHDC4Q8TBB5 520 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 COG1Q8WTW3 980 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 SUCLG2Q96I99 432 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 RBL2Q08999 1139 aa23.35■■□□□ 1.33
TMEFF1-201ENST00000374879 SLC39A14Q15043 492 aa23.35■■□□□ 1.33
TMEFF1-201ENST00000374879 BRAPQ7Z569 592 aa23.35■■□□□ 1.33
TMEFF1-201ENST00000374879 GIMAP7Q8NHV1 300 aa23.35■■□□□ 1.33
TMEFF1-201ENST00000374879 CABS1Q96KC9 395 aa23.35■■□□□ 1.33
TMEFF1-201ENST00000374879 A1CFQ9NQ94 594 aaKnown RBP23.35■■□□□ 1.33
TMEFF1-201ENST00000374879 SAMSN1Q9NSI8 373 aaKnown RBP23.35■■□□□ 1.33
TMEFF1-201ENST00000374879 TEX33O43247 280 aa23.34■■□□□ 1.33
TMEFF1-201ENST00000374879 ACRBPQ8NEB7 543 aa23.34■■□□□ 1.33
TMEFF1-201ENST00000374879 KAZALD1Q96I82 304 aa23.34■■□□□ 1.33
TMEFF1-201ENST00000374879 CD248Q9HCU0 757 aa23.34■■□□□ 1.33
TMEFF1-201ENST00000374879 MYO6Q9UM54 1294 aa23.34■■□□□ 1.33
TMEFF1-201ENST00000374879 GOLGA6CA6NDK9 693 aa23.34■■□□□ 1.33
TMEFF1-201ENST00000374879 C21orf2O43822 256 aa23.34■■□□□ 1.33
TMEFF1-201ENST00000374879 GOLGA6DP0CG33 693 aa23.34■■□□□ 1.33
TMEFF1-201ENST00000374879 GPHNQ9NQX3 736 aaPredicted RBP23.34■■□□□ 1.33
TMEFF1-201ENST00000374879 GOLGA6AQ9NYA3 693 aa23.34■■□□□ 1.33
TMEFF1-201ENST00000374879 DDX58O95786 925 aaKnown RBP23.33■■□□□ 1.33
TMEFF1-201ENST00000374879 USP14P54578 494 aa23.33■■□□□ 1.33
TMEFF1-201ENST00000374879 CAPS2Q9BXY5 557 aa23.33■■□□□ 1.33
TMEFF1-201ENST00000374879 SHTN1A0MZ66 631 aa23.33■■□□□ 1.33
TMEFF1-201ENST00000374879 FNTAP49354 379 aa23.33■■□□□ 1.33
TMEFF1-201ENST00000374879 TRDNQ13061 729 aa23.33■■□□□ 1.33
TMEFF1-201ENST00000374879 TTC19Q6DKK2 380 aaPredicted RBP23.33■■□□□ 1.33
TMEFF1-201ENST00000374879 DDX21Q9NR30 783 aaKnown RBP eCLIP23.33■■□□□ 1.33
TMEFF1-201ENST00000374879 ZMYND10O75800 440 aa23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 AMPD2Q01433 879 aa23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 DDR1Q08345 913 aa23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 STAG1Q8WVM7 1258 aa23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 NAA15Q9BXJ9 866 aaKnown RBP23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 GRIN2DO15399 1336 aa23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 SLIT3O75094 1523 aa23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 E7EWF7 191 aa23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 EIF3HO15372 352 aaKnown RBP eCLIP23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 PPFIA1Q13136 1202 aa23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 MAP9Q49MG5 647 aa23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 GSPT2Q8IYD1 628 aaKnown RBP23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 CRACR2AQ9BSW2 395 aa23.32■■□□□ 1.32
TMEFF1-201ENST00000374879 GNGT1P63211 74 aa23.31■■□□□ 1.32
TMEFF1-201ENST00000374879 KIF23Q02241 960 aaPredicted RBP23.31■■□□□ 1.32
TMEFF1-201ENST00000374879 PPP2R5AQ15172 486 aa23.31■■□□□ 1.32
TMEFF1-201ENST00000374879 ZKSCAN4Q969J2 545 aaPredicted RBP23.31■■□□□ 1.32
TMEFF1-201ENST00000374879 MED15Q96RN5 788 aa23.31■■□□□ 1.32
TMEFF1-201ENST00000374879 H0YHG0 523 aa23.31■■□□□ 1.32
TMEFF1-201ENST00000374879 CCDC102BQ68D86 513 aa23.31■■□□□ 1.32
TMEFF1-201ENST00000374879 PPFIBP1Q86W92 1011 aa23.31■■□□□ 1.32
TMEFF1-201ENST00000374879 MIEF2Q96C03 454 aa23.31■■□□□ 1.32
TMEFF1-201ENST00000374879 HOOK1Q9UJC3 728 aaKnown RBP23.31■■□□□ 1.32
TMEFF1-201ENST00000374879 ZNF827Q17R98 1081 aa23.3■■□□□ 1.32
TMEFF1-201ENST00000374879 MAN1B1Q9UKM7 699 aa23.3■■□□□ 1.32
TMEFF1-201ENST00000374879 UTYO14607 1347 aa23.3■■□□□ 1.32
TMEFF1-201ENST00000374879 ELF1P32519 619 aa23.3■■□□□ 1.32
TMEFF1-201ENST00000374879 PDIA6Q15084 440 aa23.3■■□□□ 1.32
TMEFF1-201ENST00000374879 ENOX1Q8TC92 643 aaKnown RBP23.3■■□□□ 1.32
TMEFF1-201ENST00000374879 XAGE2Q96GT9 111 aa23.3■■□□□ 1.32
TMEFF1-201ENST00000374879 A0A1B0GTH6 734 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 SLC39A6Q13433 755 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 NEDD9Q14511 834 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 RIC3Q7Z5B4 369 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 MCM8Q9UJA3 840 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 TTF2Q9UNY4 1162 aaKnown RBP23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 RESP18Q5W5W9 173 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 RAB11FIP4Q86YS3 637 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 NUTM2AQ8IVF1 878 aaPredicted RBP23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 IGKV5-2P06315 115 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 MYBL2P10244 700 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 ATP5JP18859 108 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 ARHGAP25P42331 645 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 LRCH2Q5VUJ6 765 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 DDX46Q7L014 1031 aaKnown RBP23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 TACO1Q9BSH4 297 aaKnown RBP23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 NBPF3Q9H094 633 aa23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 DBNLQ9UJU6 430 aaKnown RBP23.29■■□□□ 1.32
TMEFF1-201ENST00000374879 MDM2Q00987 491 aaPredicted RBP23.28■■□□□ 1.32
TMEFF1-201ENST00000374879 MYL6BP14649 208 aa23.28■■□□□ 1.32
TMEFF1-201ENST00000374879 EGFL6Q8IUX8 553 aa23.28■■□□□ 1.32
TMEFF1-201ENST00000374879 SELENOOQ9BVL4 669 aa23.28■■□□□ 1.32
TMEFF1-201ENST00000374879 TAOK2Q9UL54 1235 aa23.28■■□□□ 1.32
TMEFF1-201ENST00000374879 KCNH3Q9ULD8 1083 aa23.28■■□□□ 1.32
TMEFF1-201ENST00000374879 SIPA1L3O60292 1781 aaPredicted RBP23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 FAM237AA0A1B0GTK4 181 aa23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 CASP14P31944 242 aa23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 PTPAQ15257 358 aa23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 ZNF790Q6PG37 636 aa23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 KRT28Q7Z3Y7 464 aa23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 OTUD6BQ8N6M0 293 aa23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 N4BP2L2Q92802 583 aaPredicted RBP23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 MMS19Q96T76 1030 aa23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 MFAP3LO75121 409 aa23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 PPP6R2O75170 966 aa23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 MCM3P25205 808 aa23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 SLC9C2Q5TAH2 1124 aa23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 HDAC6Q9UBN7 1215 aa23.27■■□□□ 1.32
TMEFF1-201ENST00000374879 GOLGA6BA6NDN3 693 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms