RNA–Protein interactions for RNA: ENST00000363655.1

RNU6-1209P-201, Transcript of RNA, U6 small nuclear 1209, pseudogene, humanhuman

BASIC

Gene RNU6-1209P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1209P-201ENST00000363655 PCDHA4Q9UN74 947 aa3.13□□□□□ -1.91
RNU6-1209P-201ENST00000363655 TIMELESSQ9UNS1 1208 aa3.13□□□□□ -1.91
RNU6-1209P-201ENST00000363655 CYP8B1Q9UNU6 501 aa3.13□□□□□ -1.91
RNU6-1209P-201ENST00000363655 SNX11Q9Y5W9 270 aa3.13□□□□□ -1.91
RNU6-1209P-201ENST00000363655 IGF2BP3O00425 579 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 FBXO24O75426 580 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 PAPLNO95428 1278 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 USP17L7P0C7H9 530 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 ITIH2P19823 946 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 ZBTB37Q5TC79 503 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 SV2BQ7L1I2 683 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 FAM214BQ7L5A3 538 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 ATG4DQ86TL0 474 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 WFDC3Q8IUB2 231 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 POU5F2Q8N7G0 328 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 ZNF507Q8TCN5 953 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 ASB11Q8WXH4 323 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 ELMO3Q96BJ8 720 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 HEXIM2Q96MH2 286 aaKnown RBP3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 SETDB2Q96T68 719 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 C12orf49Q9H741 205 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 RC3H2Q9HBD1 1191 aaKnown RBP3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 MBNL3Q9NUK0 354 aaKnown RBP3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 FAM8A1Q9UBU6 413 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 PLAGL2Q9UPG8 496 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 U3KQE9 123 aa3.12□□□□□ -1.91
RNU6-1209P-201ENST00000363655 GNAT3A8MTJ3 354 aa3.11□□□□□ -1.91
RNU6-1209P-201ENST00000363655 PATL2C9JE40 543 aaKnown RBP3.11□□□□□ -1.91
RNU6-1209P-201ENST00000363655 LDHBP07195 334 aaKnown RBP3.11□□□□□ -1.91
RNU6-1209P-201ENST00000363655 P4HBP07237 508 aaKnown RBP3.11□□□□□ -1.91
RNU6-1209P-201ENST00000363655 RNASE1P07998 156 aaKnown RBP3.11□□□□□ -1.91
RNU6-1209P-201ENST00000363655 NTF4P34130 210 aa3.11□□□□□ -1.91
RNU6-1209P-201ENST00000363655 CD96P40200 585 aa3.11□□□□□ -1.91
RNU6-1209P-201ENST00000363655 RING1Q06587 406 aa3.11□□□□□ -1.91
RNU6-1209P-201ENST00000363655 ANGEL2Q5VTE6 544 aaKnown RBP3.11□□□□□ -1.91
RNU6-1209P-201ENST00000363655 PCNX4Q63HM2 1172 aa3.11□□□□□ -1.91
RNU6-1209P-201ENST00000363655 HDXQ7Z353 690 aa3.11□□□□□ -1.91
RNU6-1209P-201ENST00000363655 TNKS2Q9H2K2 1166 aa3.11□□□□□ -1.91
RNU6-1209P-201ENST00000363655 LRIG2O94898 1065 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 CELA3AP09093 270 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 LMNB1P20700 586 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 EIF4BP23588 611 aaKnown RBP3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 FGD1P98174 961 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 IKZF1Q13422 519 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 INPP5AQ14642 412 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 RASIP1Q5U651 963 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 SLC23A3Q6PIS1 610 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 LRFN4Q6PJG9 635 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 ARMCX6Q7L4S7 300 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 CYFIP1Q7L576 1253 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 UBE3DQ7Z6J8 389 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 LRRN4CLQ8ND94 238 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 TMEM40Q8WWA1 233 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 TRAIPQ9BWF2 469 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 FOXQ1Q9C009 403 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 PRDM5Q9NQX1 630 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 ADAMTS6Q9UKP5 1117 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 TTF2Q9UNY4 1162 aaKnown RBP3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 SNCAIPQ9Y6H5 919 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 CARMIL2Q6F5E8 1435 aa3.1□□□□□ -1.91
RNU6-1209P-201ENST00000363655 PRAMEF27A3QJZ7 478 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 FAM155AB1AL88 458 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 FARP2O94887 1054 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 EOMESO95936 686 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 C8AP07357 584 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 GNA15P30679 374 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 CLCN7P51798 805 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 ETF1P62495 437 aaKnown RBP3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 ZP2Q05996 745 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 PTPN11Q06124 597 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 NKPD1Q17RQ9 610 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 TTBK2Q6IQ55 1244 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 HID1Q8IV36 788 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 SPACA3Q8IXA5 215 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 MFSD2AQ8NA29 543 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 FAM168AQ92567 244 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 PLPPR2Q96GM1 343 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 WNT10AQ9GZT5 417 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 LMCD1Q9NZU5 365 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 TPX2Q9ULW0 747 aaKnown RBP3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 MAPK8IP1Q9UQF2 711 aa3.09□□□□□ -1.91
RNU6-1209P-201ENST00000363655 PRPF40AO75400 957 aaKnown RBP3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 SLITRK5O94991 958 aa3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 CAP2P40123 477 aa3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 RPS26P62854 115 aaKnown RBP3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 SLBPQ14493 270 aaKnown RBP eCLIP3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 CCDC85BQ15834 202 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 WIPI1Q5MNZ9 446 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 SFRP5Q5T4F7 317 aa3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 ZNF648Q5T619 568 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 FLAD1Q8NFF5 587 aa3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 MIPEPQ99797 713 aa3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 FBRSQ9HAH7 460 aa3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 PRDM7Q9NQW5 492 aa3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 AK5Q9Y6K8 562 aa3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1209P-201ENST00000363655 KRTAP9-7A8MTY7 169 aa3.07□□□□□ -1.92
RNU6-1209P-201ENST00000363655 CST3P01034 146 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1209P-201ENST00000363655 CYP7A1P22680 504 aa3.07□□□□□ -1.92
RNU6-1209P-201ENST00000363655 GRK4P32298 578 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms