RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 ZNF274Q96GC6 653 aaPredicted RBP15.73■□□□□ 0.11
CTR9-201ENST00000361367 SPATA31A1Q5TZJ5 1347 aa15.73■□□□□ 0.11
CTR9-201ENST00000361367 CC2D2BQ6DHV5 1058 aa15.73■□□□□ 0.11
CTR9-201ENST00000361367 GTF3C6Q969F1 213 aa15.73■□□□□ 0.11
CTR9-201ENST00000361367 ZSWIM6Q9HCJ5 1215 aa15.73■□□□□ 0.11
CTR9-201ENST00000361367 ADCY7P51828 1080 aa15.73■□□□□ 0.11
CTR9-201ENST00000361367 UBASH3AP57075 661 aa15.73■□□□□ 0.11
CTR9-201ENST00000361367 LSG1Q9H089 658 aaKnown RBP15.73■□□□□ 0.11
CTR9-201ENST00000361367 GOPCQ9HD26 462 aa15.73■□□□□ 0.11
CTR9-201ENST00000361367 KCNJ14Q9UNX9 436 aa15.73■□□□□ 0.11
CTR9-201ENST00000361367 ADD2P35612 726 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 MTX1Q13505 466 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 NONOQ15233 471 aaKnown RBP eCLIP15.72■□□□□ 0.11
CTR9-201ENST00000361367 PTPN14Q15678 1187 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 CCDC93Q567U6 631 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 PNMA1Q8ND90 353 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 CERKLQ49MI3 558 aaPredicted RBP15.72■□□□□ 0.11
CTR9-201ENST00000361367 TEX35Q5T0J7 233 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 NSMFQ6X4W1 530 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 VTI1AQ96AJ9 217 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 TCHPQ9BT92 498 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 NEMFO60524 1076 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 FAM13AO94988 1023 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 TYRO3Q06418 890 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 USH1GQ495M9 461 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 TBC1D9BQ66K14 1250 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 AOPEPQ8N6M6 819 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 ISCA1Q9BUE6 129 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.72■□□□□ 0.11
CTR9-201ENST00000361367 KIF2AO00139 706 aaPredicted RBP15.72■□□□□ 0.11
CTR9-201ENST00000361367 ZBED4O75132 1171 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 RASGRF1Q13972 1273 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 TTC38Q5R3I4 469 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 DCAF15Q66K64 600 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 KRT25Q7Z3Z0 450 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 MASTLQ96GX5 879 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 MMRN2Q9H8L6 949 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 VPS54Q9P1Q0 977 aa15.72■□□□□ 0.11
CTR9-201ENST00000361367 NRKQ7Z2Y5 1582 aa15.71■□□□□ 0.11
CTR9-201ENST00000361367 ZNF589Q86UQ0 364 aaPredicted RBP15.71■□□□□ 0.11
CTR9-201ENST00000361367 FANCBQ8NB91 859 aa15.71■□□□□ 0.11
CTR9-201ENST00000361367 CSADQ9Y600 493 aa15.71■□□□□ 0.11
CTR9-201ENST00000361367 KIF5CO60282 957 aa15.71■□□□□ 0.11
CTR9-201ENST00000361367 CCNT1O60563 726 aaKnown RBP15.71■□□□□ 0.11
CTR9-201ENST00000361367 ERLIN2O94905 339 aa15.71■□□□□ 0.11
CTR9-201ENST00000361367 FAM160A1Q05DH4 1040 aa15.71■□□□□ 0.11
CTR9-201ENST00000361367 USP37Q86T82 979 aa15.71■□□□□ 0.11
CTR9-201ENST00000361367 TTLL6Q8N841 843 aa15.71■□□□□ 0.11
CTR9-201ENST00000361367 USO1O60763 962 aaKnown RBP15.71■□□□□ 0.1
CTR9-201ENST00000361367 ADD1P35611 737 aaKnown RBP15.71■□□□□ 0.1
CTR9-201ENST00000361367 MARCH10Q8NA82 808 aaPredicted RBP15.71■□□□□ 0.1
CTR9-201ENST00000361367 IVNS1ABPQ9Y6Y0 642 aa15.71■□□□□ 0.1
CTR9-201ENST00000361367 ELP1O95163 1332 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 CFBP00751 764 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 PCP11498 1178 aaKnown RBP15.7■□□□□ 0.1
CTR9-201ENST00000361367 CETN2P41208 172 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 DYNLL1P63167 89 aaKnown RBP15.7■□□□□ 0.1
CTR9-201ENST00000361367 RASEFQ8IZ41 740 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 CHURC1Q8WUH1 139 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 CTAGE1Q96RT6 745 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 CYP21A2P08686 494 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 KRT13P13646 458 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 PLCD1P51178 756 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 IQCEQ6IPM2 695 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 CDC37L1Q7L3B6 337 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 HS2ST1Q7LGA3 356 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 ADGRB1O14514 1584 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 CDHR2Q9BYE9 1310 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 RAD17O75943 681 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 TXKP42681 527 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 CLRN2A0PK11 232 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 ICA1Q05084 483 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 REXO1Q8N1G1 1221 aaKnown RBP15.7■□□□□ 0.1
CTR9-201ENST00000361367 SPAG5Q96R06 1193 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 HOMER2Q9NSB8 354 aa15.7■□□□□ 0.1
CTR9-201ENST00000361367 SULF1Q8IWU6 871 aa15.69■□□□□ 0.1
CTR9-201ENST00000361367 CMTR1Q8N1G2 835 aaKnown RBP15.69■□□□□ 0.1
CTR9-201ENST00000361367 LRRC47Q8N1G4 583 aaKnown RBP15.69■□□□□ 0.1
CTR9-201ENST00000361367 OSBP2Q969R2 916 aa15.69■□□□□ 0.1
CTR9-201ENST00000361367 KIFC2Q96AC6 838 aa15.69■□□□□ 0.1
CTR9-201ENST00000361367 TPCN1Q9ULQ1 816 aa15.69■□□□□ 0.1
CTR9-201ENST00000361367 IRX3P78415 501 aaPredicted RBP15.69■□□□□ 0.1
CTR9-201ENST00000361367 TRIM28Q13263 835 aaKnown RBP15.69■□□□□ 0.1
CTR9-201ENST00000361367 TRMT1Q9NXH9 659 aaKnown RBP15.69■□□□□ 0.1
CTR9-201ENST00000361367 SNAP23O00161 211 aa15.69■□□□□ 0.1
CTR9-201ENST00000361367 CCT6AP40227 531 aaKnown RBP15.69■□□□□ 0.1
CTR9-201ENST00000361367 STX17P56962 302 aa15.69■□□□□ 0.1
CTR9-201ENST00000361367 GTPBP4Q9BZE4 634 aaKnown RBP15.69■□□□□ 0.1
CTR9-201ENST00000361367 CARMIL3Q8ND23 1372 aa15.69■□□□□ 0.1
CTR9-201ENST00000361367 M0R2C6 588 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 CHMP2AO43633 222 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 ADCK5Q3MIX3 580 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 DALRD3Q5D0E6 543 aaKnown RBP15.68■□□□□ 0.1
CTR9-201ENST00000361367 SV2BQ7L1I2 683 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 KCNH3Q9ULD8 1083 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 ADCY9O60503 1353 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 MED23Q9ULK4 1368 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 DIXDC1Q155Q3 683 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 KIF4BQ2VIQ3 1234 aa15.68■□□□□ 0.1
CTR9-201ENST00000361367 PUS7LQ9H0K6 701 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms