RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 DSCC1Q9BVC3 393 aa21.37■■□□□ 1.01
CLK2-202ENST00000361168 NACAP1Q9BZK3 213 aa21.37■■□□□ 1.01
CLK2-202ENST00000361168 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.37■■□□□ 1.01
CLK2-202ENST00000361168 USP2O75604 605 aaPredicted RBP21.36■■□□□ 1.01
CLK2-202ENST00000361168 FSTL1Q12841 308 aa21.36■■□□□ 1.01
CLK2-202ENST00000361168 DDRGK1Q96HY6 314 aa21.36■■□□□ 1.01
CLK2-202ENST00000361168 COL2A1P02458 1487 aaPredicted RBP21.36■■□□□ 1.01
CLK2-202ENST00000361168 SUPT20HL1Q3ZLR7 823 aa21.35■■□□□ 1.01
CLK2-202ENST00000361168 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.35■■□□□ 1.01
CLK2-202ENST00000361168 ARPP21Q9UBL0 812 aaPredicted RBP21.35■■□□□ 1.01
CLK2-202ENST00000361168 JAG1P78504 1218 aa21.35■■□□□ 1.01
CLK2-202ENST00000361168 HTRA3P83110 453 aa21.35■■□□□ 1.01
CLK2-202ENST00000361168 GABPAQ06546 454 aa21.35■■□□□ 1.01
CLK2-202ENST00000361168 ALX1Q15699 326 aa21.35■■□□□ 1.01
CLK2-202ENST00000361168 SBK1Q52WX2 424 aa21.35■■□□□ 1.01
CLK2-202ENST00000361168 TTC6Q86TZ1 520 aa21.35■■□□□ 1.01
CLK2-202ENST00000361168 SERPINB13Q9UIV8 391 aa21.35■■□□□ 1.01
CLK2-202ENST00000361168 UBE2Q2LH0YL09 131 aa21.34■■□□□ 1.01
CLK2-202ENST00000361168 PRDM1O75626 825 aa21.34■■□□□ 1.01
CLK2-202ENST00000361168 INPP5BP32019 993 aa21.34■■□□□ 1.01
CLK2-202ENST00000361168 PPARAQ07869 468 aa21.34■■□□□ 1.01
CLK2-202ENST00000361168 KIAA1211Q6ZU35 1233 aa21.34■■□□□ 1.01
CLK2-202ENST00000361168 ZKSCAN4Q969J2 545 aaPredicted RBP21.34■■□□□ 1.01
CLK2-202ENST00000361168 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.34■■□□□ 1.01
CLK2-202ENST00000361168 ANGEL1Q9UNK9 670 aaKnown RBP21.34■■□□□ 1.01
CLK2-202ENST00000361168 RBM8AQ9Y5S9 174 aaKnown RBP21.34■■□□□ 1.01
CLK2-202ENST00000361168 PHF20L1A8MW92 1017 aa21.33■■□□□ 1.01
CLK2-202ENST00000361168 HLA-DOAP06340 250 aa21.33■■□□□ 1.01
CLK2-202ENST00000361168 MAP3K10Q02779 954 aa21.33■■□□□ 1.01
CLK2-202ENST00000361168 TTLL12Q14166 644 aaPredicted RBP21.33■■□□□ 1.01
CLK2-202ENST00000361168 METTL16Q86W50 562 aaKnown RBP21.33■■□□□ 1.01
CLK2-202ENST00000361168 CRACR2BQ8N4Y2 399 aaPredicted RBP21.33■■□□□ 1.01
CLK2-202ENST00000361168 CYP21A2P08686 494 aa21.33■■□□□ 1
CLK2-202ENST00000361168 SHMT1P34896 483 aa21.33■■□□□ 1
CLK2-202ENST00000361168 COL9A3Q14050 684 aaPredicted RBP21.33■■□□□ 1
CLK2-202ENST00000361168 KLRG1Q96E93 195 aa21.33■■□□□ 1
CLK2-202ENST00000361168 GBA2Q9HCG7 927 aaPredicted RBP21.33■■□□□ 1
CLK2-202ENST00000361168 TBC1D10CQ8IV04 446 aa21.32■■□□□ 1
CLK2-202ENST00000361168 CLMNQ96JQ2 1002 aa21.32■■□□□ 1
CLK2-202ENST00000361168 WRNIP1Q96S55 665 aa21.32■■□□□ 1
CLK2-202ENST00000361168 FOXP4Q8IVH2 680 aaPredicted RBP21.31■■□□□ 1
CLK2-202ENST00000361168 EHD4Q9H223 541 aa21.31■■□□□ 1
CLK2-202ENST00000361168 GDF11O95390 407 aa21.31■■□□□ 1
CLK2-202ENST00000361168 NF2P35240 595 aa21.31■■□□□ 1
CLK2-202ENST00000361168 CDK8P49336 464 aa21.31■■□□□ 1
CLK2-202ENST00000361168 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.31■■□□□ 1
CLK2-202ENST00000361168 CCDC84Q86UT8 332 aaPredicted RBP21.31■■□□□ 1
CLK2-202ENST00000361168 ZMYM6O95789 1325 aa21.31■■□□□ 1
CLK2-202ENST00000361168 PPP1R12BO60237 982 aaPredicted RBP21.3■■□□□ 1
CLK2-202ENST00000361168 TBC1D12O60347 775 aa21.3■■□□□ 1
CLK2-202ENST00000361168 NECTIN1Q15223 517 aa21.3■■□□□ 1
CLK2-202ENST00000361168 C16orf86Q6ZW13 317 aa21.3■■□□□ 1
CLK2-202ENST00000361168 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.3■■□□□ 18e-7■■□□□ 14.4
CLK2-202ENST00000361168 ZNF213O14771 459 aa21.29■■□□□ 1
CLK2-202ENST00000361168 AMOTL1Q8IY63 956 aa21.29■■□□□ 1
CLK2-202ENST00000361168 HERC5Q9UII4 1024 aaKnown RBP21.29■■□□□ 1
CLK2-202ENST00000361168 TATDN1Q6P1N9 297 aa21.29■■□□□ 1
CLK2-202ENST00000361168 SAPCD2Q86UD0 394 aa21.29■■□□□ 1
CLK2-202ENST00000361168 CNKSR2Q8WXI2 1034 aa21.29■■□□□ 1
CLK2-202ENST00000361168 ZNF341Q9BYN7 854 aa21.29■■□□□ 1
CLK2-202ENST00000361168 ANAPC4Q9UJX5 808 aa21.29■■□□□ 1
CLK2-202ENST00000361168 DCAF15Q66K64 600 aa21.28■■□□□ 1
CLK2-202ENST00000361168 RASEFQ8IZ41 740 aa21.28■■□□□ 1
CLK2-202ENST00000361168 C2orf69Q8N8R5 385 aa21.28■■□□□ 1
CLK2-202ENST00000361168 ROBO3Q96MS0 1386 aa21.28■■□□□ 1
CLK2-202ENST00000361168 USP26Q9BXU7 913 aa21.28■■□□□ 1
CLK2-202ENST00000361168 ZNF112Q9UJU3 913 aa21.28■■□□□ 1
CLK2-202ENST00000361168 U3KPZ7 1027 aaPredicted RBP21.28■■□□□ 1
CLK2-202ENST00000361168 TRPM7Q96QT4 1865 aa21.28■■□□□ 1
CLK2-202ENST00000361168 NEDD4P46934 1319 aa21.27■■□□□ 1
CLK2-202ENST00000361168 TMEM88BA6NKF7 163 aa21.27■■□□□ 1
CLK2-202ENST00000361168 SLC27A2O14975 620 aa21.27■■□□□ 1
CLK2-202ENST00000361168 APLP1P51693 650 aa21.27■■□□□ 1
CLK2-202ENST00000361168 C1QTNF8P60827 252 aa21.27■■□□□ 1
CLK2-202ENST00000361168 VGLL4Q14135 290 aa21.27■■□□□ 1
CLK2-202ENST00000361168 CREB3L3Q68CJ9 461 aa21.27■■□□□ 1
CLK2-202ENST00000361168 STOX1Q6ZVD7 989 aa21.27■■□□□ 1
CLK2-202ENST00000361168 TRIM34Q9BYJ4 488 aa21.27■■□□□ 1
CLK2-202ENST00000361168 LAMB1P07942 1786 aa21.27■■□□□ 1
CLK2-202ENST00000361168 REC8O95072 547 aa21.27■■□□□ 1
CLK2-202ENST00000361168 AKR1B1P15121 316 aa21.27■■□□□ 1
CLK2-202ENST00000361168 HUNKP57058 714 aa21.27■■□□□ 1
CLK2-202ENST00000361168 MAP3K11Q16584 847 aa21.27■■□□□ 1
CLK2-202ENST00000361168 IMMTQ16891 758 aaKnown RBP21.27■■□□□ 1
CLK2-202ENST00000361168 LDLRAD1Q5T700 205 aa21.27■■□□□ 1
CLK2-202ENST00000361168 CLEC10AQ8IUN9 316 aa21.27■■□□□ 1
CLK2-202ENST00000361168 RASA1P20936 1047 aa21.26■□□□□ 0.99
CLK2-202ENST00000361168 FAM47AQ5JRC9 791 aa21.26■□□□□ 0.99
CLK2-202ENST00000361168 CTNNA3Q9UI47 895 aa21.26■□□□□ 0.99
CLK2-202ENST00000361168 ABT1Q9ULW3 272 aaKnown RBP21.26■□□□□ 0.99
CLK2-202ENST00000361168 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.26■□□□□ 0.99
CLK2-202ENST00000361168 OTOFQ9HC10 1997 aa21.26■□□□□ 0.99
CLK2-202ENST00000361168 CAP2P40123 477 aa21.25■□□□□ 0.99
CLK2-202ENST00000361168 IREB2P48200 963 aaKnown RBP21.25■□□□□ 0.99
CLK2-202ENST00000361168 MAP3K9P80192 1104 aa21.25■□□□□ 0.99
CLK2-202ENST00000361168 CERKLQ49MI3 558 aaPredicted RBP21.25■□□□□ 0.99
CLK2-202ENST00000361168 RRP12Q5JTH9 1297 aaKnown RBP21.25■□□□□ 0.99
CLK2-202ENST00000361168 ARMC9Q7Z3E5 817 aa21.25■□□□□ 0.99
CLK2-202ENST00000361168 HOOK2Q96ED9 719 aa21.25■□□□□ 0.99
CLK2-202ENST00000361168 ELP3Q9H9T3 547 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms