RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 OPHN1O60890 802 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 CORO7P57737 925 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 TTF1Q15361 905 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-203ENST00000358544 CACNA1DQ01668 2161 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 RAB34Q9BZG1 259 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 HYOU1Q9Y4L1 999 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 EMILIN1Q9Y6C2 1016 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 RTEL1-TNFRSF6BF6WH68 1400 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 ATP2A1O14983 1001 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 ZBTB43O43298 467 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 SUN1O94901 812 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 DONSONQ9NYP3 566 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 FANCD2Q9BXW9 1451 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 EP300Q09472 2414 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-203ENST00000358544 PSMD1Q99460 953 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 YIPF3Q9GZM5 350 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 HHATQ5VTY9 493 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 ARMC2Q8NEN0 867 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 MGARPQ8TDB4 240 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 EVI5O60447 810 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 PFKFB1P16118 471 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 POSTNQ15063 836 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 TRMT44Q8IYL2 757 aaKnown RBP6.76□□□□□ -1.33
VPS13B-203ENST00000358544 GNAT3A8MTJ3 354 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 TRIM31Q9BZY9 425 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 FAM83GA6ND36 823 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 KRT9P35527 623 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 FAM173BQ6P4H8 233 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 SLC20A2Q08357 652 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 TMEM110-MUSTN1A8MSY1 372 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 SGSM2O43147 1006 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 GCFC2P16383 781 aaKnown RBP6.76□□□□□ -1.33
VPS13B-203ENST00000358544 TEX11Q8IYF3 940 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 PRG4Q92954 1404 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-203ENST00000358544 TBCAO75347 108 aaKnown RBP6.76□□□□□ -1.33
VPS13B-203ENST00000358544 RPSAP08865 295 aaKnown RBP6.76□□□□□ -1.33
VPS13B-203ENST00000358544 ZNF710Q8N1W2 664 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 IQCDQ96DY2 449 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 STX2P32856 288 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 MFSD6Q6ZSS7 791 aa6.76□□□□□ -1.33
VPS13B-203ENST00000358544 NSFL1CQ9UNZ2 370 aaKnown RBP6.76□□□□□ -1.33
VPS13B-203ENST00000358544 PSMD2Q13200 908 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 OSBPL1AQ9BXW6 950 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 NPC1L1Q9UHC9 1359 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 TXNDC9O14530 226 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 NR1I2O75469 434 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 CTNNA2P26232 953 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 SLMAPQ14BN4 828 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 MED12Q93074 2177 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 PRAG1Q86YV5 1406 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 NBPF3Q9H094 633 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 USP19O94966 1318 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 ARHGEF12Q9NZN5 1544 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 TCP11Q8WWU5 503 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 ECM2O94769 699 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-203ENST00000358544 PNOCQ13519 176 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 C8orf58Q8NAV2 365 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 GSDMBQ8TAX9 411 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 P3H4Q92791 437 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 TBC1D8BQ0IIM8 1120 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 TMED1Q13445 227 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 PDCD2Q16342 344 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-203ENST00000358544 VSTM4Q8IW00 320 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 THEGQ9P2T0 379 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 NAV3Q8IVL0 2385 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 POLEQ07864 2286 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 ARID5BQ14865 1188 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 HVCN1Q96D96 273 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 Q9H521 79 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 NUP160Q12769 1436 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 ZMYND10O75800 440 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 NR1D1P20393 614 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 MCMDC2Q4G0Z9 681 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 VWA3BQ502W6 1294 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 NELFBQ8WX92 580 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 ARHGAP5Q13017 1502 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 BTBD11A6QL63 1104 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 RAPGEF1Q13905 1077 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 TTC6Q86TZ1 520 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 IFIT1P09914 478 aaKnown RBP6.75□□□□□ -1.33
VPS13B-203ENST00000358544 METTL24Q5JXM2 366 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 SLC35F6Q8N357 371 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 HAUS4Q9H6D7 363 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 EPRSP07814 1512 aaKnown RBP6.75□□□□□ -1.33
VPS13B-203ENST00000358544 PTPRZ1P23471 2315 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-203ENST00000358544 FAM133BQ5BKY9 247 aaKnown RBP6.75□□□□□ -1.33
VPS13B-203ENST00000358544 TSNARE1Q96NA8 513 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 KRT23Q9C075 422 aa6.75□□□□□ -1.33
VPS13B-203ENST00000358544 ZCCHC17Q9NP64 241 aaKnown RBP6.75□□□□□ -1.33
VPS13B-203ENST00000358544 COL17A1Q9UMD9 1497 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-203ENST00000358544 ATP2A2P16615 1042 aaKnown RBP6.74□□□□□ -1.33
VPS13B-203ENST00000358544 MORC3Q14149 939 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 KIF6Q6ZMV9 814 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 GSTA5Q7RTV2 222 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 TRIM58Q8NG06 486 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 CLEC17AQ6ZS10 378 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 CCDC65Q8IXS2 484 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 ERMNQ8TAM6 284 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 FGD4Q96M96 766 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 PCDHA7Q9UN72 937 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms