RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.08■■■□□ 2.25
ALKAL1-201ENST00000358543 CCDC171Q6TFL3 1326 aa29.08■■■□□ 2.25
ALKAL1-201ENST00000358543 PHF20L1A8MW92 1017 aa29.07■■■□□ 2.24
ALKAL1-201ENST00000358543 APPP05067 770 aa29.07■■■□□ 2.24
ALKAL1-201ENST00000358543 PLCD1P51178 756 aa29.07■■■□□ 2.24
ALKAL1-201ENST00000358543 SBK1Q52WX2 424 aa29.07■■■□□ 2.24
ALKAL1-201ENST00000358543 AMOTL1Q8IY63 956 aa29.07■■■□□ 2.24
ALKAL1-201ENST00000358543 WRNIP1Q96S55 665 aa29.07■■■□□ 2.24
ALKAL1-201ENST00000358543 ARPP21Q9UBL0 812 aaPredicted RBP29.07■■■□□ 2.24
ALKAL1-201ENST00000358543 RAD50Q92878 1312 aa29.06■■■□□ 2.24
ALKAL1-201ENST00000358543 USP17L12C9JPN9 530 aa29.06■■■□□ 2.24
ALKAL1-201ENST00000358543 USP17L21D6R901 530 aa29.06■■■□□ 2.24
ALKAL1-201ENST00000358543 C12orf60Q5U649 245 aa29.06■■■□□ 2.24
ALKAL1-201ENST00000358543 CTR9Q6PD62 1173 aa29.06■■■□□ 2.24
ALKAL1-201ENST00000358543 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.06■■■□□ 2.24
ALKAL1-201ENST00000358543 EPB41L4AQ9HCS5 686 aaPredicted RBP29.06■■■□□ 2.24
ALKAL1-201ENST00000358543 SERPINB13Q9UIV8 391 aa29.06■■■□□ 2.24
ALKAL1-201ENST00000358543 FOXP2O15409 715 aa29.05■■■□□ 2.24
ALKAL1-201ENST00000358543 CRACR2BQ8N4Y2 399 aaPredicted RBP29.05■■■□□ 2.24
ALKAL1-201ENST00000358543 SIPA1L1O43166 1804 aa29.05■■■□□ 2.24
ALKAL1-201ENST00000358543 HSPD1P10809 573 aaKnown RBP29.04■■■□□ 2.24
ALKAL1-201ENST00000358543 TDO2P48775 406 aa29.04■■■□□ 2.24
ALKAL1-201ENST00000358543 ZNF157P51786 506 aaPredicted RBP29.04■■■□□ 2.24
ALKAL1-201ENST00000358543 ALX1Q15699 326 aa29.04■■■□□ 2.24
ALKAL1-201ENST00000358543 VPS53Q5VIR6 699 aa29.04■■■□□ 2.24
ALKAL1-201ENST00000358543 CCDC102AQ96A19 550 aa29.04■■■□□ 2.24
ALKAL1-201ENST00000358543 TRIM34Q9BYJ4 488 aa29.04■■■□□ 2.24
ALKAL1-201ENST00000358543 DNAJC18Q9H819 358 aa29.04■■■□□ 2.24
ALKAL1-201ENST00000358543 BAZ2AQ9UIF9 1905 aaKnown RBP29.04■■■□□ 2.24
ALKAL1-201ENST00000358543 CTNND1O60716 968 aaKnown RBP29.03■■■□□ 2.24
ALKAL1-201ENST00000358543 SLURP2P0DP57 97 aa29.03■■■□□ 2.24
ALKAL1-201ENST00000358543 GABPAQ06546 454 aa29.03■■■□□ 2.24
ALKAL1-201ENST00000358543 SLC4A8Q2Y0W8 1093 aa29.03■■■□□ 2.24
ALKAL1-201ENST00000358543 NOL9Q5SY16 702 aaKnown RBP29.03■■■□□ 2.24
ALKAL1-201ENST00000358543 SLC10A4Q96EP9 437 aa29.03■■■□□ 2.24
ALKAL1-201ENST00000358543 CSADQ9Y600 493 aa29.03■■■□□ 2.24
ALKAL1-201ENST00000358543 CYP2D6P10635 497 aa29.02■■■□□ 2.24
ALKAL1-201ENST00000358543 ECE1P42892 770 aa29.02■■■□□ 2.24
ALKAL1-201ENST00000358543 VGLL4Q14135 290 aa29.02■■■□□ 2.24
ALKAL1-201ENST00000358543 TATDN1Q6P1N9 297 aa29.02■■■□□ 2.24
ALKAL1-201ENST00000358543 DNAJC5GQ8N7S2 189 aa29.02■■■□□ 2.24
ALKAL1-201ENST00000358543 CLMNQ96JQ2 1002 aa29.02■■■□□ 2.24
ALKAL1-201ENST00000358543 NAPBQ9H115 298 aa29.02■■■□□ 2.24
ALKAL1-201ENST00000358543 FAM196BA6NMK8 535 aa29.01■■■□□ 2.23
ALKAL1-201ENST00000358543 INPP5BP32019 993 aa29.01■■■□□ 2.23
ALKAL1-201ENST00000358543 ZKSCAN4Q969J2 545 aaPredicted RBP29.01■■■□□ 2.23
ALKAL1-201ENST00000358543 SWAP70Q9UH65 585 aa29.01■■■□□ 2.23
ALKAL1-201ENST00000358543 ZMYM6O95789 1325 aa29■■■□□ 2.23
ALKAL1-201ENST00000358543 SGSM2O43147 1006 aa29■■■□□ 2.23
ALKAL1-201ENST00000358543 CAPNS2Q96L46 248 aa29■■■□□ 2.23
ALKAL1-201ENST00000358543 IL25Q9H293 177 aa29■■■□□ 2.23
ALKAL1-201ENST00000358543 OTOFQ9HC10 1997 aa28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 CYP2D7A0A087X1C5 515 aa28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 FAM155AB1AL88 458 aaPredicted RBP28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 CDC45O75419 566 aa28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 FGAP02671 866 aa28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 SLC10A3P09131 477 aa28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 EVX2Q03828 476 aa28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 CYP4F22Q6NT55 531 aa28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 PAXIP1Q6ZW49 1069 aaPredicted RBP28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 RASAL3Q86YV0 1011 aa28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 DSCC1Q9BVC3 393 aa28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 GTF3C3Q9Y5Q9 886 aa28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 SNCAIPQ9Y6H5 919 aa28.99■■■□□ 2.23
ALKAL1-201ENST00000358543 CAP2P40123 477 aa28.98■■■□□ 2.23
ALKAL1-201ENST00000358543 VEGFBP49765 207 aa28.98■■■□□ 2.23
ALKAL1-201ENST00000358543 SCYL3Q8IZE3 742 aa28.98■■■□□ 2.23
ALKAL1-201ENST00000358543 GINM1Q9NU53 330 aa28.98■■■□□ 2.23
ALKAL1-201ENST00000358543 WDR33Q9C0J8 1336 aaKnown RBP28.97■■■□□ 2.23
ALKAL1-201ENST00000358543 MINDY4BA8MYZ0 360 aa28.97■■■□□ 2.23
ALKAL1-201ENST00000358543 SHMT1P34896 483 aa28.97■■■□□ 2.23
ALKAL1-201ENST00000358543 CASC1Q6TDU7 716 aa28.97■■■□□ 2.23
ALKAL1-201ENST00000358543 C16orf86Q6ZW13 317 aa28.97■■■□□ 2.23
ALKAL1-201ENST00000358543 ELP3Q9H9T3 547 aa28.97■■■□□ 2.23
ALKAL1-201ENST00000358543 RRP1BQ14684 758 aaKnown RBP28.96■■■□□ 2.23
ALKAL1-201ENST00000358543 ERO1BQ86YB8 467 aa28.96■■■□□ 2.23
ALKAL1-201ENST00000358543 DYNLL2Q96FJ2 89 aa28.96■■■□□ 2.23
ALKAL1-201ENST00000358543 ROBO3Q96MS0 1386 aa28.96■■■□□ 2.23
ALKAL1-201ENST00000358543 SPDYE5A6NIY4 337 aa28.95■■■□□ 2.22
ALKAL1-201ENST00000358543 SMIM22K7EJ46 135 aa28.95■■■□□ 2.22
ALKAL1-201ENST00000358543 ZBTB48P10074 688 aaPredicted RBP28.95■■■□□ 2.22
ALKAL1-201ENST00000358543 PPARAQ07869 468 aa28.95■■■□□ 2.22
ALKAL1-201ENST00000358543 NOGQ13253 232 aa28.95■■■□□ 2.22
ALKAL1-201ENST00000358543 SPRYD7Q5W111 196 aa28.95■■■□□ 2.22
ALKAL1-201ENST00000358543 ESYT1Q9BSJ8 1104 aa28.95■■■□□ 2.22
ALKAL1-201ENST00000358543 PICK1Q9NRD5 415 aa28.95■■■□□ 2.22
ALKAL1-201ENST00000358543 ANAPC4Q9UJX5 808 aa28.95■■■□□ 2.22
ALKAL1-201ENST00000358543 CDK8P49336 464 aa28.94■■■□□ 2.22
ALKAL1-201ENST00000358543 PPATQ06203 517 aa28.94■■■□□ 2.22
ALKAL1-201ENST00000358543 CERKLQ49MI3 558 aaPredicted RBP28.94■■■□□ 2.22
ALKAL1-201ENST00000358543 OPTNQ96CV9 577 aa28.94■■■□□ 2.22
ALKAL1-201ENST00000358543 WNK4Q96J92 1243 aa28.94■■■□□ 2.22
ALKAL1-201ENST00000358543 SLC3A2P08195 630 aaKnown RBP28.93■■■□□ 2.22
ALKAL1-201ENST00000358543 MAP2K2P36507 400 aa28.93■■■□□ 2.22
ALKAL1-201ENST00000358543 ZNF287Q9HBT7 754 aa28.93■■■□□ 2.22
ALKAL1-201ENST00000358543 ASNSP08243 561 aa28.92■■■□□ 2.22
ALKAL1-201ENST00000358543 PTPRAP18433 802 aa28.92■■■□□ 2.22
ALKAL1-201ENST00000358543 SLC44A5Q8NCS7 719 aa28.92■■■□□ 2.22
ALKAL1-201ENST00000358543 CTNNA3Q9UI47 895 aa28.92■■■□□ 2.22
ALKAL1-201ENST00000358543 GRM1Q13255 1194 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms