RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 RANBP6O60518 1105 aaKnown RBP18.37■□□□□ 0.53
CTSA-202ENST00000354880 YBX3P16989 372 aaKnown RBP eCLIP18.37■□□□□ 0.53
CTSA-202ENST00000354880 DDIT3P35638 169 aa18.37■□□□□ 0.53
CTSA-202ENST00000354880 MMP14P50281 582 aa18.37■□□□□ 0.53
CTSA-202ENST00000354880 CCDC83Q8IWF9 413 aa18.37■□□□□ 0.53
CTSA-202ENST00000354880 MTA3Q9BTC8 594 aa18.37■□□□□ 0.53
CTSA-202ENST00000354880 OSBPL5Q9H0X9 879 aaPredicted RBP18.37■□□□□ 0.53
CTSA-202ENST00000354880 TDRD3Q9H7E2 651 aaKnown RBP18.37■□□□□ 0.53
CTSA-202ENST00000354880 CWC22Q9HCG8 908 aaKnown RBP18.37■□□□□ 0.53
CTSA-202ENST00000354880 SBF1O95248 1867 aa18.37■□□□□ 0.53
CTSA-202ENST00000354880 SH2B2O14492 632 aaPredicted RBP18.36■□□□□ 0.53
CTSA-202ENST00000354880 EVCP57679 992 aa18.36■□□□□ 0.53
CTSA-202ENST00000354880 SART3Q15020 963 aaKnown RBP18.36■□□□□ 0.53
CTSA-202ENST00000354880 TTC6Q86TZ1 520 aa18.36■□□□□ 0.53
CTSA-202ENST00000354880 MTMR14Q8NCE2 650 aa18.36■□□□□ 0.53
CTSA-202ENST00000354880 IGDCC4Q8TDY8 1250 aa18.36■□□□□ 0.53
CTSA-202ENST00000354880 DYNLL2Q96FJ2 89 aa18.36■□□□□ 0.53
CTSA-202ENST00000354880 IFIT3O14879 490 aaKnown RBP18.35■□□□□ 0.53
CTSA-202ENST00000354880 NPM3O75607 178 aaKnown RBP18.35■□□□□ 0.53
CTSA-202ENST00000354880 NT5C2P49902 561 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 CACNB3P54284 484 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 STK3Q13188 491 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 TMEM67Q5HYA8 995 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 NECAB1Q8N987 351 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 ZNF274Q96GC6 653 aaPredicted RBP18.35■□□□□ 0.53
CTSA-202ENST00000354880 ZNF287Q9HBT7 754 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.35■□□□□ 0.53
CTSA-202ENST00000354880 ERICH2A1L162 156 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 LIFRP42702 1097 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 C16orf86Q6ZW13 317 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 DPF2Q92785 391 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 UBAC1Q9BSL1 405 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 MKNK2Q9HBH9 465 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 FAM198AQ9UFP1 575 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 GJA3Q9Y6H8 435 aa18.35■□□□□ 0.53
CTSA-202ENST00000354880 ZNF541Q9H0D2 1346 aa18.34■□□□□ 0.53
CTSA-202ENST00000354880 ST3GAL1Q11201 340 aa18.34■□□□□ 0.53
CTSA-202ENST00000354880 IQCA1Q86XH1 822 aa18.34■□□□□ 0.53
CTSA-202ENST00000354880 GTF3C6Q969F1 213 aa18.34■□□□□ 0.53
CTSA-202ENST00000354880 ZKSCAN3Q9BRR0 538 aa18.34■□□□□ 0.53
CTSA-202ENST00000354880 LY9Q9HBG7 655 aa18.34■□□□□ 0.53
CTSA-202ENST00000354880 TMOD2Q9NZR1 351 aa18.34■□□□□ 0.53
CTSA-202ENST00000354880 CHMP5Q9NZZ3 219 aa18.34■□□□□ 0.53
CTSA-202ENST00000354880 CIZ1Q9ULV3 898 aaPredicted RBP18.34■□□□□ 0.53
CTSA-202ENST00000354880 NAP1L2Q9ULW6 460 aaPredicted RBP18.34■□□□□ 0.53
CTSA-202ENST00000354880 KLF18A0A0U1RQI7 1052 aa18.33■□□□□ 0.53
CTSA-202ENST00000354880 PFKFB2O60825 505 aa18.33■□□□□ 0.53
CTSA-202ENST00000354880 PDIA3P30101 505 aaKnown RBP18.33■□□□□ 0.53
CTSA-202ENST00000354880 GMPSP49915 693 aaPredicted RBP18.33■□□□□ 0.53
CTSA-202ENST00000354880 TCP10Q12799 353 aa18.33■□□□□ 0.53
CTSA-202ENST00000354880 SGMS1Q86VZ5 419 aa18.33■□□□□ 0.53
CTSA-202ENST00000354880 MYOZ2Q9NPC6 264 aa18.33■□□□□ 0.53
CTSA-202ENST00000354880 TSPY2A6NKD2 308 aa18.33■□□□□ 0.52
CTSA-202ENST00000354880 HLA-DOAP06340 250 aa18.33■□□□□ 0.52
CTSA-202ENST00000354880 CDK8P49336 464 aa18.33■□□□□ 0.52
CTSA-202ENST00000354880 ZNF280AP59817 542 aaPredicted RBP18.33■□□□□ 0.52
CTSA-202ENST00000354880 WTAPQ15007 396 aa18.33■□□□□ 0.52
CTSA-202ENST00000354880 SLC44A5Q8NCS7 719 aa18.33■□□□□ 0.52
CTSA-202ENST00000354880 DHX36Q9H2U1 1008 aaKnown RBP18.33■□□□□ 0.52
CTSA-202ENST00000354880 BRPF3Q9ULD4 1205 aa18.33■□□□□ 0.52
CTSA-202ENST00000354880 TNKSO95271 1327 aa18.32■□□□□ 0.52
CTSA-202ENST00000354880 ENTPD3O75355 529 aa18.32■□□□□ 0.52
CTSA-202ENST00000354880 FAM47AQ5JRC9 791 aa18.32■□□□□ 0.52
CTSA-202ENST00000354880 NFXL1Q6ZNB6 911 aa18.32■□□□□ 0.52
CTSA-202ENST00000354880 ZFPM1Q8IX07 1006 aa18.32■□□□□ 0.52
CTSA-202ENST00000354880 ZNF444Q8N0Y2 327 aaPredicted RBP18.32■□□□□ 0.52
CTSA-202ENST00000354880 TMTC2Q8N394 836 aa18.32■□□□□ 0.52
CTSA-202ENST00000354880 ZBED3Q96IU2 234 aaPredicted RBP18.32■□□□□ 0.52
CTSA-202ENST00000354880 ZSCAN10Q96SZ4 725 aaPredicted RBP18.32■□□□□ 0.52
CTSA-202ENST00000354880 SENP2Q9HC62 589 aa18.32■□□□□ 0.52
CTSA-202ENST00000354880 ZNF70Q9UC06 446 aaPredicted RBP18.32■□□□□ 0.52
CTSA-202ENST00000354880 SERPINB13Q9UIV8 391 aa18.32■□□□□ 0.52
CTSA-202ENST00000354880 SHTN1A0MZ66 631 aa18.31■□□□□ 0.52
CTSA-202ENST00000354880 MYO1BO43795 1136 aa18.31■□□□□ 0.52
CTSA-202ENST00000354880 RASA1P20936 1047 aa18.31■□□□□ 0.52
CTSA-202ENST00000354880 GABPAQ06546 454 aa18.31■□□□□ 0.52
CTSA-202ENST00000354880 SCRN1Q12765 414 aa18.31■□□□□ 0.52
CTSA-202ENST00000354880 SPDYE2Q495Y8 402 aa18.31■□□□□ 0.52
CTSA-202ENST00000354880 SMC3Q9UQE7 1217 aa18.31■□□□□ 0.52
CTSA-202ENST00000354880 CLRN2A0PK11 232 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 CCDC69A6NI79 296 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 GOLGA8BA8MQT2 603 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 WNT10BO00744 389 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 TFAP4Q01664 338 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 SEC23AQ15436 765 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 MICALL2Q8IY33 904 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 RNF181Q9P0P0 153 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 CNOT7Q9UIV1 285 aaKnown RBP18.3■□□□□ 0.52
CTSA-202ENST00000354880 CCT2P78371 535 aaKnown RBP18.3■□□□□ 0.52
CTSA-202ENST00000354880 APOA5Q6Q788 366 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 ZSCAN29Q8IWY8 852 aaPredicted RBP18.3■□□□□ 0.52
CTSA-202ENST00000354880 GPC2Q8N158 579 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 ENAHQ8N8S7 591 aaPredicted RBP18.3■□□□□ 0.52
CTSA-202ENST00000354880 CHMP4CQ96CF2 233 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 EHD4Q9H223 541 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 SWAP70Q9UH65 585 aa18.3■□□□□ 0.52
CTSA-202ENST00000354880 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
CTSA-202ENST00000354880 TCP10L2B9ZVM9 353 aa18.29■□□□□ 0.52
CTSA-202ENST00000354880 SOCS7O14512 581 aa18.29■□□□□ 0.52
CTSA-202ENST00000354880 TSPY3P0CV98 308 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms