RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 PHLPP2Q6ZVD8 1323 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 ARHGAP23Q9P227 1491 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 TBC1D8O95759 1140 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 PPFIBP1Q86W92 1011 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 NOSTRINQ8IVI9 506 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 ACRBPQ8NEB7 543 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 ABCF2Q9UG63 623 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 ASAP1Q9ULH1 1129 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 ADD2P35612 726 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 TOB1P50616 345 aaPredicted RBP18.43■□□□□ 0.54
SCARB1-202ENST00000339570 PLEKHA4Q9H4M7 779 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 TFR2Q9UP52 801 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 EFCAB8A8MWE9 144 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 RBL2Q08999 1139 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 NOM1Q5C9Z4 860 aaKnown RBP18.42■□□□□ 0.54
SCARB1-202ENST00000339570 KIF6Q6ZMV9 814 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 TEX13AQ9BXU3 409 aaPredicted RBP18.42■□□□□ 0.54
SCARB1-202ENST00000339570 TMEM51Q9NW97 253 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 CALCOCO1Q9P1Z2 691 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 VPS18Q9P253 973 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 HPSEQ9Y251 543 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 RFX7Q2KHR2 1363 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 CUTAO60888 179 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 TMEM139Q8IV31 216 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 IGSF22Q8N9C0 903 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 VPS16Q9H269 839 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 LY9Q9HBG7 655 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 RAI14Q9P0K7 980 aa18.42■□□□□ 0.54
SCARB1-202ENST00000339570 CYP2C19P33261 490 aa18.41■□□□□ 0.54
SCARB1-202ENST00000339570 GPR108Q9NPR9 543 aa18.41■□□□□ 0.54
SCARB1-202ENST00000339570 FAM217BQ9NTX9 383 aaPredicted RBP18.41■□□□□ 0.54
SCARB1-202ENST00000339570 N4BP1O75113 896 aaKnown RBP18.41■□□□□ 0.54
SCARB1-202ENST00000339570 ZNF174Q15697 407 aa18.41■□□□□ 0.54
SCARB1-202ENST00000339570 TRIM22Q8IYM9 498 aa18.41■□□□□ 0.54
SCARB1-202ENST00000339570 TACC3Q9Y6A5 838 aa18.41■□□□□ 0.54
SCARB1-202ENST00000339570 TCIRG1Q13488 830 aa18.41■□□□□ 0.54
SCARB1-202ENST00000339570 C10orf67Q8IYJ2 551 aa18.41■□□□□ 0.54
SCARB1-202ENST00000339570 SDR42E1Q8WUS8 393 aa18.41■□□□□ 0.54
SCARB1-202ENST00000339570 MED15Q96RN5 788 aa18.41■□□□□ 0.54
SCARB1-202ENST00000339570 TRIM34Q9BYJ4 488 aa18.41■□□□□ 0.54
SCARB1-202ENST00000339570 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.41■□□□□ 0.54
SCARB1-202ENST00000339570 ZRANB2O95218 330 aaKnown RBP eCLIP18.4■□□□□ 0.548e-6■■■□□ 17.5
SCARB1-202ENST00000339570 RTN1Q16799 776 aa18.4■□□□□ 0.54
SCARB1-202ENST00000339570 RAD9BQ6WBX8 426 aa18.4■□□□□ 0.54
SCARB1-202ENST00000339570 IGDCC4Q8TDY8 1250 aa18.4■□□□□ 0.54
SCARB1-202ENST00000339570 PDE11AQ9HCR9 933 aa18.4■□□□□ 0.54
SCARB1-202ENST00000339570 CYP2D7A0A087X1C5 515 aa18.4■□□□□ 0.54
SCARB1-202ENST00000339570 GTF2E1P29083 439 aaPredicted RBP18.4■□□□□ 0.54
SCARB1-202ENST00000339570 CASP14P31944 242 aa18.4■□□□□ 0.54
SCARB1-202ENST00000339570 MFSD6Q6ZSS7 791 aa18.4■□□□□ 0.54
SCARB1-202ENST00000339570 CCDC102AQ96A19 550 aa18.4■□□□□ 0.54
SCARB1-202ENST00000339570 PLIN2Q99541 437 aa18.4■□□□□ 0.54
SCARB1-202ENST00000339570 HOOK1Q9UJC3 728 aaKnown RBP18.4■□□□□ 0.54
SCARB1-202ENST00000339570 PPP6R2O75170 966 aa18.39■□□□□ 0.54
SCARB1-202ENST00000339570 EPB41L4AQ9HCS5 686 aaPredicted RBP18.39■□□□□ 0.54
SCARB1-202ENST00000339570 SLC4A4Q9Y6R1 1079 aa18.39■□□□□ 0.54
SCARB1-202ENST00000339570 ERICH2A1L162 156 aa18.39■□□□□ 0.53
SCARB1-202ENST00000339570 CHMP4BP1P59074 171 aa18.39■□□□□ 0.53
SCARB1-202ENST00000339570 AKAP17AQ02040 695 aaKnown RBP18.39■□□□□ 0.53
SCARB1-202ENST00000339570 TAF3Q5VWG9 929 aa18.39■□□□□ 0.53
SCARB1-202ENST00000339570 IFNL3Q8IZI9 196 aa18.39■□□□□ 0.53
SCARB1-202ENST00000339570 AKR1B15C9JRZ8 316 aaPredicted RBP18.39■□□□□ 0.53
SCARB1-202ENST00000339570 H3BQF6 201 aa18.39■□□□□ 0.53
SCARB1-202ENST00000339570 WTAPQ15007 396 aa18.39■□□□□ 0.53
SCARB1-202ENST00000339570 NTRK3Q16288 839 aa18.39■□□□□ 0.53
SCARB1-202ENST00000339570 LONRF2Q1L5Z9 754 aa18.39■□□□□ 0.53
SCARB1-202ENST00000339570 GOLGA1Q92805 767 aa18.39■□□□□ 0.53
SCARB1-202ENST00000339570 ANKRD18BA2A2Z9 1011 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 IRS4O14654 1257 aaPredicted RBP18.38■□□□□ 0.53
SCARB1-202ENST00000339570 MRFAP1Q9Y605 127 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 MRC1P22897 1456 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 CCDC175P0C221 793 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 CD44P16070 742 aaKnown RBP18.38■□□□□ 0.53
SCARB1-202ENST00000339570 CAPN2P17655 700 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 EVA1CP58658 441 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 EARS2Q5JPH6 523 aaKnown RBP18.38■□□□□ 0.53
SCARB1-202ENST00000339570 FAM53CQ9NYF3 392 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 CTNND2Q9UQB3 1225 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 A0A087X0B3 334 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 TRIM66O15016 1216 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 CIAO1O76071 339 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 FKBP15Q5T1M5 1219 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 TTLL11Q8NHH1 800 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 MPHOSPH8Q99549 860 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 RABEP2Q9H5N1 569 aa18.38■□□□□ 0.53
SCARB1-202ENST00000339570 WNT7AO00755 349 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 ENC1O14682 589 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 ZMYND10O75800 440 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 FAM193AP78312 1265 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 MAP3K9P80192 1104 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 SLC35F6Q8N357 371 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 LCORLQ8N3X6 602 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 RGS22Q8NE09 1264 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 SLF1Q9BQI6 1058 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 LRP2BPQ9P2M1 347 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 CPDO75976 1380 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 KIF5CO60282 957 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 RAD51AP2Q09MP3 1159 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 NUP88Q99567 741 aaPredicted RBP18.37■□□□□ 0.53
SCARB1-202ENST00000339570 TAB2Q9NYJ8 693 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms